BioLitMine: Advanced Mining of Biomedical and Biological Literature About Human Genes and Genes from Major Model Organisms

por Hu, Yanhui, Chung, Verena, Comjean, Aram, Rodiger, Jonathan, Nipun, Fnu, Perrimon, Norbert, Mohr, Stephanie E.
Publicado 2020

SNP-CRISPR: A Web Tool for SNP-Specific Genome Editing

por Chen, Chiao-Lin, Rodiger, Jonathan, Chung, Verena, Viswanatha, Raghuvir, Mohr, Stephanie E., Hu, Yanhui, Perrimon, Norbert
Publicado 2019

Molecular Interaction Search Tool (MIST): an integrated resource for mining gene and protein interaction data

por Hu, Yanhui, Vinayagam, Arunachalam, Nand, Ankita, Comjean, Aram, Chung, Verena, Hao, Tong, Mohr, Stephanie E, Perrimon, Norbert
Publicado 2018

FlyRNAi.org—the database of the Drosophila RNAi screening center and transgenic RNAi project: 2021 update

por Hu, Yanhui, Comjean, Aram, Rodiger, Jonathan, Liu, Yifang, Gao, Yue, Chung, Verena, Zirin, Jonathan, Perrimon, Norbert, Mohr, Stephanie E
Publicado 2020

Cell‐to‐cell and type‐to‐type heterogeneity of signaling networks: insights from the crowd

por Gabor, Attila, Tognetti, Marco, Driessen, Alice, Tanevski, Jovan, Guo, Baosen, Cao, Wencai, Shen, He, Yu, Thomas, Chung, Verena, Bodenmiller, Bernd, Saez‐Rodriguez, Julio
Publicado 2021

iProteinDB: An Integrative Database of Drosophila Post-translational Modifications

por Hu, Yanhui, Sopko, Richelle, Chung, Verena, Foos, Marianna, Studer, Romain A., Landry, Sean D., Liu, Daniel, Rabinow, Leonard, Gnad, Florian, Beltrao, Pedro, Perrimon, Norbert
Publicado 2018

CRI iAtlas: an interactive portal for immuno-oncology research

por Eddy, James A., Thorsson, Vésteinn, Lamb, Andrew E., Gibbs, David L., Heimann, Carolina, Yu, Jia Xin, Chung, Verena, Chae, Yooree, Dang, Kristen, Vincent, Benjamin G., Shmulevich, Ilya, Guinney, Justin
Publicado 2020

A Crowdsourcing Approach to Develop Machine Learning Models to Quantify Radiographic Joint Damage in Rheumatoid Arthritis

por Sun, Dongmei, Nguyen, Thanh M., Allaway, Robert J., Wang, Jelai, Chung, Verena, Yu, Thomas V., Mason, Michael, Dimitrovsky, Isaac, Ericson, Lars, Li, Hongyang, Guan, Yuanfang, Israel, Ariel, Olar, Alex, Pataki, Balint Armin, Stolovitzky, Gustavo, Guinney, Justin, Gulko, Percio S., Frazier, Mason B., Chen, Jake Y., Costello, James C., Bridges, S. Louis
Publicado 2022

A gene-specific T2A-GAL4 library for Drosophila

por Lee, Pei-Tseng, Zirin, Jonathan, Kanca, Oguz, Lin, Wen-Wen, Schulze, Karen L, Li-Kroeger, David, Tao, Rong, Devereaux, Colby, Hu, Yanhui, Chung, Verena, Fang, Ying, He, Yuchun, Pan, Hongling, Ge, Ming, Zuo, Zhongyuan, Housden, Benjamin E, Mohr, Stephanie E, Yamamoto, Shinya, Levis, Robert W, Spradling, Allan C, Perrimon, Norbert, Bellen, Hugo J
Publicado 2018

Microbiome-based risk prediction in incident heart failure: a community challenge

por Erawijantari, Pande Putu, Kartal, Ece, Liñares-Blanco, José, Laajala, Teemu D., Feldman, Lily Elizabeth, Carmona-Saez, Pedro, Shigdel, Rajesh, Claesson, Marcus Joakim, Bertelsen, Randi Jacobsen, Gomez-Cabrero, David, Minot, Samuel, Albrecht, Jacob, Chung, Verena, Inouye, Michael, Jousilahti, Pekka, Schultz, Jobst-Hendrik, Friederich, Hans-Christoph, Knight, Rob, Salomaa, Veikko, Niiranen, Teemu, Havulinna, Aki S., Saez-Rodriguez, Julio, Levinson, Rebecca T., Lahti, Leo
Publicado 2023

A community challenge for a pancancer drug mechanism of action inference from perturbational profile data

por Douglass, Eugene F., Allaway, Robert J., Szalai, Bence, Wang, Wenyu, Tian, Tingzhong, Fernández-Torras, Adrià, Realubit, Ron, Karan, Charles, Zheng, Shuyu, Pessia, Alberto, Tanoli, Ziaurrehman, Jafari, Mohieddin, Wan, Fangping, Li, Shuya, Xiong, Yuanpeng, Duran-Frigola, Miquel, Bertoni, Martino, Badia-i-Mompel, Pau, Mateo, Lídia, Guitart-Pla, Oriol, Chung, Verena, Tang, Jing, Zeng, Jianyang, Aloy, Patrick, Saez-Rodriguez, Julio, Guinney, Justin, Gerhard, Daniela S., Califano, Andrea
Publicado 2022

The Brain Tumor Segmentation (BraTS) Challenge 2023: Brain MR Image Synthesis for Tumor Segmentation (BraSyn)

por Li, Hongwei Bran, Conte, Gian Marco, Anwar, Syed Muhammad, Kofler, Florian, Ezhov, Ivan, van Leemput, Koen, Piraud, Marie, Diaz, Maria, Cole, Byrone, Calabrese, Evan, Rudie, Jeff, Meissen, Felix, Adewole, Maruf, Janas, Anastasia, Kazerooni, Anahita Fathi, LaBella, Dominic, Moawad, Ahmed W., Farahani, Keyvan, Eddy, James, Bergquist, Timothy, Chung, Verena, Shinohara, Russell Takeshi, Dako, Farouk, Wiggins, Walter, Reitman, Zachary, Wang, Chunhao, Liu, Xinyang, Jiang, Zhifan, Familiar, Ariana, Johanson, Elaine, Meier, Zeke, Davatzikos, Christos, Freymann, John, Kirby, Justin, Bilello, Michel, Fathallah-Shaykh, Hassan M., Wiest, Roland, Kirschke, Jan, Colen, Rivka R., Kotrotsou, Aikaterini, Lamontagne, Pamela, Marcus, Daniel, Milchenko, Mikhail, Nazeri, Arash, Weber, Marc-André, Mahajan, Abhishek, Mohan, Suyash, Mongan, John, Hess, Christopher, Cha, Soonmee, Villanueva-Meyer, Javier, Colak, Errol, Crivellaro, Priscila, Jakab, Andras, Albrecht, Jake, Anazodo, Udunna, Aboian, Mariam, Yu, Thomas, Chung, Verena, Bergquist, Timothy, Eddy, James, Albrecht, Jake, Baid, Ujjwal, Bakas, Spyridon, Linguraru, Marius George, Menze, Bjoern, Iglesias, Juan Eugenio, Wiestler, Benedikt
Publicado 2023

The Brain Tumor Segmentation (BraTS) Challenge 2023: Glioma Segmentation in Sub-Saharan Africa Patient Population (BraTS-Africa)

por Adewole, Maruf, Rudie, Jeffrey D., Gbdamosi, Anu, Toyobo, Oluyemisi, Raymond, Confidence, Zhang, Dong, Omidiji, Olubukola, Akinola, Rachel, Suwaid, Mohammad Abba, Emegoakor, Adaobi, Ojo, Nancy, Aguh, Kenneth, Kalaiwo, Chinasa, Babatunde, Gabriel, Ogunleye, Afolabi, Gbadamosi, Yewande, Iorpagher, Kator, Calabrese, Evan, Aboian, Mariam, Linguraru, Marius, Albrecht, Jake, Wiestler, Benedikt, Kofler, Florian, Janas, Anastasia, LaBella, Dominic, Kzerooni, Anahita Fathi, Li, Hongwei Bran, Iglesias, Juan Eugenio, Farahani, Keyvan, Eddy, James, Bergquist, Timothy, Chung, Verena, Shinohara, Russell Takeshi, Wiggins, Walter, Reitman, Zachary, Wang, Chunhao, Liu, Xinyang, Jiang, Zhifan, Familiar, Ariana, Van Leemput, Koen, Bukas, Christina, Piraud, Maire, Conte, Gian-Marco, Johansson, Elaine, Meier, Zeke, Menze, Bjoern H, Baid, Ujjwal, Bakas, Spyridon, Dako, Farouk, Fatade, Abiodun, Anazodo, Udunna C
Publicado 2023

Microbiome Preterm Birth DREAM Challenge: Crowdsourcing Machine Learning Approaches to Advance Preterm Birth Research

por Golob, Jonathan L., Oskotsky, Tomiko T., Tang, Alice S., Roldan, Alennie, Chung, Verena, Ha, Connie W.Y., Wong, Ronald J., Flynn, Kaitlin J., Parraga-Leo, Antonio, Wibrand, Camilla, Minot, Samuel S., Andreoletti, Gaia, Kosti, Idit, Bletz, Julie, Nelson, Amber, Gao, Jifan, Wei, Zhoujingpeng, Chen, Guanhua, Tang, Zheng-Zheng, Novielli, Pierfrancesco, Romano, Donato, Pantaleo, Ester, Amoroso, Nicola, Monaco, Alfonso, Vacca, Mirco, De Angelis, Maria, Bellotti, Roberto, Tangaro, Sabina, Kuntzleman, Abigail, Bigcraft, Isaac, Techtmann, Stephen, Bae, Daehun, Kim, Eunyoung, Jeon, Jongbum, Joe, Soobok, Theis, Kevin R., Ng, Sherrianne, Lee Li, Yun S., Diaz-Gimeno, Patricia, Bennett, Phillip R., MacIntyre, David A., Stolovitzky, Gustavo, Lynch, Susan V., Albrecht, Jake, Gomez-Lopez, Nardhy, Romero, Roberto, Stevenson, David K., Aghaeepour, Nima, Tarca, Adi L., Costello, James C., Sirota, Marina
Publicado 2023

The Brain Tumor Segmentation (BraTS) Challenge 2023: Focus on Pediatrics (CBTN-CONNECT-DIPGR-ASNR-MICCAI BraTS-PEDs)

por Kazerooni, Anahita Fathi, Khalili, Nastaran, Liu, Xinyang, Haldar, Debanjan, Jiang, Zhifan, Anwar, Syed Muhammed, Albrecht, Jake, Adewole, Maruf, Anazodo, Udunna, Anderson, Hannah, Bagheri, Sina, Baid, Ujjwal, Bergquist, Timothy, Borja, Austin J., Calabrese, Evan, Chung, Verena, Conte, Gian-Marco, Dako, Farouk, Eddy, James, Ezhov, Ivan, Familiar, Ariana, Farahani, Keyvan, Haldar, Shuvanjan, Iglesias, Juan Eugenio, Janas, Anastasia, Johansen, Elaine, Jones, Blaise V, Kofler, Florian, LaBella, Dominic, Lai, Hollie Anne, Van Leemput, Koen, Li, Hongwei Bran, Maleki, Nazanin, McAllister, Aaron S, Meier, Zeke, Menze, Bjoern, Moawad, Ahmed W, Nandolia, Khanak K, Pavaine, Julija, Piraud, Marie, Poussaint, Tina, Prabhu, Sanjay P, Reitman, Zachary, Rodriguez, Andres, Rudie, Jeffrey D, Shaikh, Ibraheem Salman, Shah, Lubdha M., Sheth, Nakul, Shinohara, Russel Taki, Tu, Wenxin, Viswanathan, Karthik, Wang, Chunhao, Ware, Jeffrey B, Wiestler, Benedikt, Wiggins, Walter, Anna Zapaishchykova, Aboian, Mariam, Bornhorst, Miriam, de Blank, Peter, Deutsch, Michelle, Fouladi, Maryam, Hoffman, Lindsey, Kann, Benjamin, Lazow, Margot, Mikael, Leonie, Nabavizadeh, Ali, Packer, Roger, Resnick, Adam, Rood, Brian, Vossough, Arastoo, Bakas, Spyridon, Linguraru, Marius George
Publicado 2023

The Brain Tumor Segmentation (BraTS-METS) Challenge 2023: Brain Metastasis Segmentation on Pre-treatment MRI

por Moawad, Ahmed W., Janas, Anastasia, Baid, Ujjwal, Ramakrishnan, Divya, Jekel, Leon, Krantchev, Kiril, Moy, Harrison, Saluja, Rachit, Osenberg, Klara, Wilms, Klara, Kaur, Manpreet, Avesta, Arman, Pedersen, Gabriel Cassinelli, Maleki, Nazanin, Salimi, Mahdi, Merkaj, Sarah, von Reppert, Marc, Tillmans, Niklas, Lost, Jan, Bousabarah, Khaled, Holler, Wolfgang, Lin, MingDe, Westerhoff, Malte, Maresca, Ryan, Link, Katherine E., Tahon, Nourel hoda, Marcus, Daniel, Sotiras, Aristeidis, LaMontagne, Pamela, Chakrabarty, Strajit, Teytelboym, Oleg, Youssef, Ayda, Nada, Ayaman, Velichko, Yuri S., Gennaro, Nicolo, Cramer, Justin, Johnson, Derek R., Kwan, Benjamin Y.M., Petrovic, Boyan, Patro, Satya N., Wu, Lei, So, Tiffany, Thompson, Gerry, Kam, Anthony, Perez-Carrillo, Gloria Guzman, Lall, Neil, Albrecht, Jake, Anazodo, Udunna, Lingaru, Marius George, Menze, Bjoern H, Wiestler, Benedikt, Adewole, Maruf, Anwar, Syed Muhammad, Labella, Dominic, Li, Hongwei Bran, Iglesias, Juan Eugenio, Farahani, Keyvan, Eddy, James, Bergquist, Timothy, Chung, Verena, Shinohara, Russel Takeshi, Dako, Farouk, Wiggins, Walter, Reitman, Zachary, Wang, Chunhao, Liu, Xinyang, Jiang, Zhifan, Van Leemput, Koen, Piraud, Marie, Ezhov, Ivan, Johanson, Elaine, Meier, Zeke, Familiar, Ariana, Kazerooni, Anahita Fathi, Kofler, Florian, Calabrese, Evan, Aneja, Sanjay, Chiang, Veronica, Ikuta, Ichiro, Shafique, Umber, Memon, Fatima, Conte, Gian Marco, Bakas, Spyridon, Rudie, Jeffrey, Aboian, Mariam
Publicado 2023