Back to Bermuda: how is science best served?

por Church, Deanna M, Hillier, LaDeana W
Publicado 2009

Direct determination of diploid genome sequences

por Weisenfeld, Neil I., Kumar, Vijay, Shah, Preyas, Church, Deanna M., Jaffe, David B.
Publicado 2017

Alternate-locus aware variant calling in whole genome sequencing

por Jäger, Marten, Schubach, Max, Zemojtel, Tomasz, Reinert, Knut, Church, Deanna M., Robinson, Peter N.
Publicado 2016

ClinVar: public archive of relationships among sequence variation and human phenotype

por Landrum, Melissa J., Lee, Jennifer M., Riley, George R., Jang, Wonhee, Rubinstein, Wendy S., Church, Deanna M., Maglott, Donna R.
Publicado 2014

A variant by any name: quantifying annotation discordance across tools and clinical databases

por Yen, Jennifer L., Garcia, Sarah, Montana, Aldrin, Harris, Jason, Chervitz, Stephen, Morra, Massimo, West, John, Chen, Richard, Church, Deanna M.
Publicado 2017

Clone DB: an integrated NCBI resource for clone-associated data

por Schneider, Valerie A., Chen, Hsiu-Chuan, Clausen, Cliff, Meric, Peter A., Zhou, Zhigang, Bouk, Nathan, Husain, Nora, Maglott, Donna R., Church, Deanna M.
Publicado 2013

A Chromosome-Length Assembly of the Hawaiian Monk Seal (Neomonachus schauinslandi): A History of “Genetic Purging” and Genomic Stability

por Mohr, David W., Gaughran, Stephen J., Paschall, Justin, Naguib, Ahmed, Pang, Andy Wing Chun, Dudchenko, Olga, Aiden, Erez Lieberman, Church, Deanna M., Scott, Alan F.
Publicado 2022

A general approach for detecting expressed mutations in AML cells using single cell RNA-sequencing

por Petti, Allegra A., Williams, Stephen R., Miller, Christopher A., Fiddes, Ian T., Srivatsan, Sridhar N., Chen, David Y., Fronick, Catrina C., Fulton, Robert S., Church, Deanna M., Ley, Timothy J.
Publicado 2019

Author Correction: A general approach for detecting expressed mutations in AML cells using single cell RNA-sequencing

por Petti, Allegra A., Williams, Stephen R., Miller, Christopher A., Fiddes, Ian T., Srivatsan, Sridhar N., Chen, David Y., Fronick, Catrina C., Fulton, Robert S., Church, Deanna M., Ley, Timothy J.
Publicado 2022

Birth, expansion, and death of VCY-containing palindromes on the human Y chromosome

por Shi, Wentao, Massaia, Andrea, Louzada, Sandra, Handsaker, Juliet, Chow, William, McCarthy, Shane, Collins, Joanna, Hallast, Pille, Howe, Kerstin, Church, Deanna M., Yang, Fengtang, Xue, Yali, Tyler-Smith, Chris
Publicado 2019

dbVar and DGVa: public archives for genomic structural variation

por Lappalainen, Ilkka, Lopez, John, Skipper, Lisa, Hefferon, Timothy, Spalding, J. Dylan, Garner, John, Chen, Chao, Maguire, Michael, Corbett, Matt, Zhou, George, Paschall, Justin, Ananiev, Victor, Flicek, Paul, Church, Deanna M.
Publicado 2013

Reference quality assembly of the 3.5-Gb genome of Capsicum annuum from a single linked-read library

por Hulse-Kemp, Amanda M., Maheshwari, Shamoni, Stoffel, Kevin, Hill, Theresa A., Jaffe, David, Williams, Stephen R., Weisenfeld, Neil, Ramakrishnan, Srividya, Kumar, Vijay, Shah, Preyas, Schatz, Michael C., Church, Deanna M., Van Deynze, Allen
Publicado 2018

Database resources of the National Center for Biotechnology Information: update

por Wheeler, David L., Church, Deanna M., Edgar, Ron, Federhen, Scott, Helmberg, Wolfgang, Madden, Thomas L., Pontius, Joan U., Schuler, Gregory D., Schriml, Lynn M., Sequeira, Edwin, Suzek, Tugba O., Tatusova, Tatiana A., Wagner, Lukas
Publicado 2004

Single haplotype assembly of the human genome from a hydatidiform mole

por Steinberg, Karyn Meltz, Schneider, Valerie A., Graves-Lindsay, Tina A., Fulton, Robert S., Agarwala, Richa, Huddleston, John, Shiryev, Sergey A., Morgulis, Aleksandr, Surti, Urvashi, Warren, Wesley C., Church, Deanna M., Eichler, Evan E., Wilson, Richard K.
Publicado 2014

Assembly: a resource for assembled genomes at NCBI

por Kitts, Paul A., Church, Deanna M., Thibaud-Nissen, Françoise, Choi, Jinna, Hem, Vichet, Sapojnikov, Victor, Smith, Robert G., Tatusova, Tatiana, Xiang, Charlie, Zherikov, Andrey, DiCuccio, Michael, Murphy, Terence D., Pruitt, Kim D., Kimchi, Avi
Publicado 2016

De novo assembly of the olive fruit fly (Bactrocera oleae) genome with linked-reads and long-read technologies minimizes gaps and provides exceptional Y chromosome assembly

por Bayega, Anthony, Djambazian, Haig, Tsoumani, Konstantina T., Gregoriou, Maria-Eleni, Sagri, Efthimia, Drosopoulou, Eleni, Mavragani-Tsipidou, Penelope, Giorda, Kristina, Tsiamis, George, Bourtzis, Kostas, Oikonomopoulos, Spyridon, Dewar, Ken, Church, Deanna M., Papanicolaou, Alexie, Mathiopoulos, Kostas D., Ragoussis, Jiannis
Publicado 2020

High-throughput sequencing of the DBA/2J mouse genome

por Wang, Xusheng, Agarwala, Richa, Capra, John A, Chen, Zugen, Church, Deanna M, Ciobanu, Daniel C, Li, Zhengsheng, Lu, Lu, Mozhui, Khyobeni, Mulligan, Megan K, Nelson, Stanley F, Pollard, Katherine S, Taylor, Williams L, Thomason, Donald B, Williams, Robert W
Publicado 2010

Extending reference assembly models

por Church, Deanna M, Schneider, Valerie A, Steinberg, Karyn Meltz, Schatz, Michael C, Quinlan, Aaron R, Chin, Chen-Shan, Kitts, Paul A, Aken, Bronwen, Marth, Gabor T, Hoffman, Michael M, Herrero, Javier, Mendoza, M Lisandra Zepeda, Durbin, Richard, Flicek, Paul
Publicado 2015

Achieving high-sensitivity for clinical applications using augmented exome sequencing

por Patwardhan, Anil, Harris, Jason, Leng, Nan, Bartha, Gabor, Church, Deanna M., Luo, Shujun, Haudenschild, Christian, Pratt, Mark, Zook, Justin, Salit, Marc, Tirch, Jeanie, Morra, Massimo, Chervitz, Stephen, Li, Ming, Clark, Michael, Garcia, Sarah, Chandratillake, Gemma, Kirk, Scott, Ashley, Euan, Snyder, Michael, Altman, Russ, Bustamante, Carlos, Butte, Atul J., West, John, Chen, Richard
Publicado 2015

Database resources of the National Center for Biotechnology Information

por Wheeler, David L., Barrett, Tanya, Benson, Dennis A., Bryant, Stephen H., Canese, Kathi, Chetvernin, Vyacheslav, Church, Deanna M., DiCuccio, Michael, Edgar, Ron, Federhen, Scott, Geer, Lewis Y., Kapustin, Yuri, Khovayko, Oleg, Landsman, David, Lipman, David J., Madden, Thomas L., Maglott, Donna R., Ostell, James, Miller, Vadim, Pruitt, Kim D., Schuler, Gregory D., Sequeira, Edwin, Sherry, Steven T., Sirotkin, Karl, Souvorov, Alexandre, Starchenko, Grigory, Tatusov, Roman L., Tatusova, Tatiana A., Wagner, Lukas, Yaschenko, Eugene
Publicado 2007