Genes2FANs: connecting genes through functional association networks

por Dannenfelser, Ruth, Clark, Neil R, Ma'ayan, Avi
Publicado 2012

Dynamics of the discovery process of protein-protein interactions from low content studies

por Wang, Zichen, Clark, Neil R., Ma’ayan, Avi
Publicado 2015

Sets2Networks: network inference from repeated observations of sets

por Clark, Neil R, Dannenfelser, Ruth, Tan, Christopher M, Komosinski, Michael E, Ma'ayan, Avi
Publicado 2012

The characteristic direction: a geometrical approach to identify differentially expressed genes

por Clark, Neil R, Hu, Kevin S, Feldmann, Axel S, Kou, Yan, Chen, Edward Y, Duan, Qiaonan, Ma’ayan, Avi
Publicado 2014

Enrichr: interactive and collaborative HTML5 gene list enrichment analysis tool

por Chen, Edward Y, Tan, Christopher M, Kou, Yan, Duan, Qiaonan, Wang, Zichen, Meirelles, Gabriela Vaz, Clark, Neil R, Ma’ayan, Avi
Publicado 2013

Cell-specific prediction and application of drug-induced gene expression profiles

por Hodos, Rachel, Zhang, Ping, Lee, Hao-Chih, Duan, Qiaonan, Wang, Zichen, Clark, Neil R., Ma'ayan, Avi, Wang, Fei, Kidd, Brian, Hu, Jianying, Sontag, David, Dudley, Joel
Publicado 2018

Glucocorticoid receptor isoforms direct distinct mitochondrial programs to regulate ATP production

por Morgan, David J., Poolman, Toryn M., Williamson, Andrew J. K., Wang, Zichen, Clark, Neil R., Ma’ayan, Avi, Whetton, Anthony D., Brass, Andrew, Matthews, Laura C., Ray, David W.
Publicado 2016

Recovering Protein-Protein and Domain-Domain Interactions from Aggregation of IP-MS Proteomics of Coregulator Complexes

por Mazloom, Amin R., Dannenfelser, Ruth, Clark, Neil R., Grigoryan, Arsen V., Linder, Kathryn M., Cardozo, Timothy J., Bond, Julia C., Boran, Aislyn D. W., Iyengar, Ravi, Malovannaya, Anna, Lanz, Rainer B., Ma'ayan, Avi
Publicado 2011

Proteomics Analysis of the Non-Muscle Myosin Heavy Chain IIa-Enriched Actin-Myosin Complex Reveals Multiple Functions within the Podocyte

por Hays, Thomas, Ma’ayan, Avi, Clark, Neil R., Tan, Christopher M., Teixeira, Avelino, Teixeira, Angela, Choi, Jae W., Burdis, Nora, Jung, Sung Yun, Bajaj, Amol O., O’Malley, Bert W., He, John C., Hyink, Deborah P., Klotman, Paul E.
Publicado 2014

L1000CDS(2): LINCS L1000 characteristic direction signatures search engine

por Duan, Qiaonan, Reid, St Patrick, Clark, Neil R, Wang, Zichen, Fernandez, Nicolas F, Rouillard, Andrew D, Readhead, Ben, Tritsch, Sarah R, Hodos, Rachel, Hafner, Marc, Niepel, Mario, Sorger, Peter K, Dudley, Joel T, Bavari, Sina, Panchal, Rekha G, Ma’ayan, Avi
Publicado 2016

Extraction and analysis of signatures from the Gene Expression Omnibus by the crowd

por Wang, Zichen, Monteiro, Caroline D., Jagodnik, Kathleen M., Fernandez, Nicolas F., Gundersen, Gregory W., Rouillard, Andrew D., Jenkins, Sherry L., Feldmann, Axel S., Hu, Kevin S., McDermott, Michael G., Duan, Qiaonan, Clark, Neil R., Jones, Matthew R., Kou, Yan, Goff, Troy, Woodland, Holly, Amaral, Fabio M R., Szeto, Gregory L., Fuchs, Oliver, Schüssler-Fiorenza Rose, Sophia M., Sharma, Shvetank, Schwartz, Uwe, Bausela, Xabier Bengoetxea, Szymkiewicz, Maciej, Maroulis, Vasileios, Salykin, Anton, Barra, Carolina M., Kruth, Candice D., Bongio, Nicholas J., Mathur, Vaibhav, Todoric, Radmila D, Rubin, Udi E., Malatras, Apostolos, Fulp, Carl T., Galindo, John A., Motiejunaite, Ruta, Jüschke, Christoph, Dishuck, Philip C., Lahl, Katharina, Jafari, Mohieddin, Aibar, Sara, Zaravinos, Apostolos, Steenhuizen, Linda H., Allison, Lindsey R., Gamallo, Pablo, de Andres Segura, Fernando, Dae Devlin, Tyler, Pérez-García, Vicente, Ma'ayan, Avi
Publicado 2016