Genome-wide association study of lung lesions and pleurisy in New Zealand lambs

por McRae, Kathryn M, Rowe, Suzanne J, Baird, Hayley J, Bixley, Matthew J, Clarke, Shannon M
Publicado 2018

Development of Epigenetic Clocks for Key Ruminant Species

por Caulton, Alex, Dodds, Ken G., McRae, Kathryn M., Couldrey, Christine, Horvath, Steve, Clarke, Shannon M.
Publicado 2021

Reduced representation sequencing detects only subtle regional structure in a heavily exploited and rapidly recolonizing marine mammal species

por Dussex, Nicolas, Taylor, Helen R., Stovall, Willam R., Rutherford, Kim, Dodds, Ken G., Clarke, Shannon M., Gemmell, Neil J.
Publicado 2018

Construction of relatedness matrices using genotyping-by-sequencing data

por Dodds, Ken G., McEwan, John C., Brauning, Rudiger, Anderson, Rayna M., van Stijn, Tracey C., Kristjánsson, Theodor, Clarke, Shannon M.
Publicado 2015

Assessing accuracy of imputation using different SNP panel densities in a multi-breed sheep population

por Ventura, Ricardo V., Miller, Stephen P., Dodds, Ken G., Auvray, Benoit, Lee, Michael, Bixley, Matthew, Clarke, Shannon M., McEwan, John C.
Publicado 2016

Estimation of linkage disequilibrium and effective population size in New Zealand sheep using three different methods to create genetic maps

por Prieur, Vincent, Clarke, Shannon M., Brito, Luiz F., McEwan, John C., Lee, Michael A., Brauning, Rudiger, Dodds, Ken G., Auvray, Benoît
Publicado 2017

Linkage Disequilibrium Estimation in Low Coverage High-Throughput Sequencing Data

por Bilton, Timothy P., McEwan, John C., Clarke, Shannon M., Brauning, Rudiger, van Stijn, Tracey C., Rowe, Suzanne J., Dodds, Ken G.
Publicado 2018

A High Throughput Single Nucleotide Polymorphism Multiplex Assay for Parentage Assignment in New Zealand Sheep

por Clarke, Shannon M., Henry, Hannah M., Dodds, Ken G., Jowett, Timothy W. D., Manley, Tim R., Anderson, Rayna M., McEwan, John C.
Publicado 2014

Exclusion and Genomic Relatedness Methods for Assignment of Parentage Using Genotyping-by-Sequencing Data

por Dodds, Ken G., McEwan, John C., Brauning, Rudiger, van Stijn, Tracey C., Rowe, Suzanne J., McEwan, K. Mary, Clarke, Shannon M.
Publicado 2019

Application of Low Coverage Genotyping by Sequencing in Selectively Bred Arctic Charr (Salvelinus alpinus)

por Palaiokostas, Christos, Clarke, Shannon M., Jeuthe, Henrik, Brauning, Rudiger, Bilton, Timothy P., Dodds, Ken G., McEwan, John C., De Koning, Dirk-Jan
Publicado 2020

Genetic diversity of a New Zealand multi-breed sheep population and composite breeds’ history revealed by a high-density SNP chip

por Brito, Luiz F., McEwan, John C., Miller, Stephen P., Pickering, Natalie K., Bain, Wendy E., Dodds, Ken G., Schenkel, Flávio S., Clarke, Shannon M.
Publicado 2017

Prediction of genomic breeding values for growth, carcass and meat quality traits in a multi-breed sheep population using a HD SNP chip

por Brito, Luiz F., Clarke, Shannon M., McEwan, John C., Miller, Stephen P., Pickering, Natalie K., Bain, Wendy E., Dodds, Ken G., Sargolzaei, Mehdi, Schenkel, Flávio S.
Publicado 2017

Developing Successful Breeding Programs for New Zealand Aquaculture: A Perspective on Progress and Future Genomic Opportunities

por Symonds, Jane E., Clarke, Shannon M., King, Nick, Walker, Seumas P., Blanchard, Brian, Sutherland, David, Roberts, Rodney, Preece, Mark A., Tate, Mike, Buxton, Peter, Dodds, Ken G.
Publicado 2019

Global Analysis of Transcription Start Sites in the New Ovine Reference Genome (Oar rambouillet v1.0)

por Salavati, Mazdak, Caulton, Alex, Clark, Richard, Gazova, Iveta, Smith, Timothy P. L., Worley, Kim C., Cockett, Noelle E., Archibald, Alan L., Clarke, Shannon M., Murdoch, Brenda M., Clark, Emily L.
Publicado 2020

Genetic variation in skin traits in New Zealand lambs

por McRae, Kathryn M, Cooper, Sue M, McEwan, John C, Anderson, Rayna, Bain, Wendy E, Baird, Hayley J, Dodds, Ken G, Clarke, Shannon M, Pickering, Natalie K, Holmes, Geoff
Publicado 2022

SNPs for Parentage Testing and Traceability in Globally Diverse Breeds of Sheep

por Heaton, Michael P., Leymaster, Kreg A., Kalbfleisch, Theodore S., Kijas, James W., Clarke, Shannon M., McEwan, John, Maddox, Jillian F., Basnayake, Veronica, Petrik, Dustin T., Simpson, Barry, Smith, Timothy P. L., Chitko-McKown, Carol G.
Publicado 2014

Genomic Tools for the Identification of Loci Associated with Facial Eczema in New Zealand Sheep

por McRae, Kathryn M., Rowe, Suzanne J., Johnson, Patricia L., Baird, Hayley J., Cullen, Neil G., Bixley, Matthew J., Plowman, Jeffrey E., Deb-Choudhury, Santanu, Brauning, Rudiger, Amyes, Neville C., Dodds, Ken G., Newman, Sheryl-Anne N., McEwan, John C., Clarke, Shannon M.
Publicado 2021