MDS_IES_DB: a database of macronuclear and micronuclear genes in spirotrichous ciliates

por Cavalcanti, Andre R. O., Clarke, Thomas H., Landweber, Laura F.
Publicado 2005

GGRaSP: a R-package for selecting representative genomes using Gaussian mixture models

por Clarke, Thomas H, Brinkac, Lauren M, Sutton, Granger, Fouts, Derrick E
Publicado 2018

MPrESS: An R-Package for Accurately Predicting Power for Comparisons of 16S rRNA Microbiome Taxa Distributions including Simulation by Dirichlet Mixture Modeling

por Clarke, Thomas H., Greco, Chris, Brinkac, Lauren, Nelson, Karen E., Singh, Harinder
Publicado 2023

Evidence from Multiple Species that Spider Silk Glue Component ASG2 is a Spidroin

por Collin, Matthew A., Clarke, Thomas H., Ayoub, Nadia A., Hayashi, Cheryl Y.
Publicado 2016

Enterobacter hormaechei subsp. hoffmannii subsp. nov., Enterobacter hormaechei subsp. xiangfangensis comb. nov., Enterobacter roggenkampii sp. nov., and Enterobacter muelleri is...

por Sutton, Granger G., Brinkac, Lauren M., Clarke, Thomas H., Fouts, Derrick E.
Publicado 2018

Spider Transcriptomes Identify Ancient Large-Scale Gene Duplication Event Potentially Important in Silk Gland Evolution

por Clarke, Thomas H., Garb, Jessica E., Hayashi, Cheryl Y., Arensburger, Peter, Ayoub, Nadia A.
Publicado 2015

PanACEA: a bioinformatics tool for the exploration and visualization of bacterial pan-chromosomes

por Clarke, Thomas H., Brinkac, Lauren M., Inman, Jason M., Sutton, Granger, Fouts, Derrick E.
Publicado 2018

Dramatic expansion of the black widow toxin arsenal uncovered by multi-tissue transcriptomics and venom proteomics

por Haney, Robert A, Ayoub, Nadia A, Clarke, Thomas H, Hayashi, Cheryl Y, Garb, Jessica E
Publicado 2014

Proteomic Evidence for Components of Spider Silk Synthesis from Black Widow Silk Glands and Fibers

por Chaw, Ro Crystal, Correa-Garhwal, Sandra M., Clarke, Thomas H., Ayoub, Nadia A., Hayashi, Cheryl Y.
Publicado 2015

CD28 (null) CD4 T-cell expansions in autoimmune disease suggest a link with cytomegalovirus infection

por Bano, Aalia, Pera, Alejandra, Almoukayed, Ahmad, Clarke, Thomas H.S., Kirmani, Sukaina, Davies, Kevin A., Kern, Florian
Publicado 2019

The evolutionary history of cribellate orb-weaver capture thread spidroins

por Correa-Garhwal, Sandra M., Baker, Richard H., Clarke, Thomas H., Ayoub, Nadia A., Hayashi, Cheryl Y.
Publicado 2022

Large-scale comparative analysis of microbial pan-genomes using PanOCT

por Inman, Jason M, Sutton, Granger G, Beck, Erin, Brinkac, Lauren M, Clarke, Thomas H, Fouts, Derrick E
Publicado 2019

Evolutionary shifts in gene expression decoupled from gene duplication across functionally distinct spider silk glands

por Clarke, Thomas H., Garb, Jessica E., Haney, Robert A., Chaw, R. Crystal, Hayashi, Cheryl Y., Ayoub, Nadia A.
Publicado 2017

Effects of Gene Duplication, Positive Selection, and Shifts in Gene Expression on the Evolution of the Venom Gland Transcriptome in Widow Spiders

por Haney, Robert A., Clarke, Thomas H., Gadgil, Rujuta, Fitzpatrick, Ryan, Hayashi, Cheryl Y., Ayoub, Nadia A., Garb, Jessica E.
Publicado 2016

Spatial and Environmental Variation of the Human Hair Microbiota

por Brinkac, Lauren, Clarke, Thomas H., Singh, Harinder, Greco, Chris, Gomez, Andres, Torralba, Manolito G., Frank, Bryan, Nelson, Karen E.
Publicado 2018

Multi-tissue transcriptomics of the black widow spider reveals expansions, co-options, and functional processes of the silk gland gene toolkit

por Clarke, Thomas H, Garb, Jessica E, Hayashi, Cheryl Y, Haney, Robert A, Lancaster, Alexander K, Corbett, Susan, Ayoub, Nadia A
Publicado 2014

Silk genes and silk gene expression in the spider Tengella perfuga (Zoropsidae), including a potential cribellar spidroin (CrSp)

por Correa-Garhwal, Sandra M., Chaw, R. Crystal, Clarke, Thomas H., Alaniz, Liliana G., Chan, Fanny S., Alfaro, Rachael E., Hayashi, Cheryl Y.
Publicado 2018

Down-regulation of AUXIN RESPONSE FACTORS 6 and 8 by microRNA 167 leads to floral development defects and female sterility in tomato

por Liu, Ning, Wu, Shan, Van Houten, Jason, Wang, Ying, Ding, Biao, Fei, Zhangjun, Clarke, Thomas H., Reed, Jason W., van der Knaap, Esther
Publicado 2014

Spidroins and Silk Fibers of Aquatic Spiders

por Correa-Garhwal, Sandra M., Clarke, Thomas H., Janssen, Marc, Crevecoeur, Luc, McQuillan, Bryce N., Simpson, Angela H., Vink, Cor J., Hayashi, Cheryl Y.
Publicado 2019

AbGRI4, a novel antibiotic resistance island in multiply antibiotic-resistant Acinetobacter baumannii clinical isolates

por Chan, Agnes P, Choi, Yongwook, Clarke, Thomas H, Brinkac, Lauren M, White, Richard C, Jacobs, Michael R, Bonomo, Robert A, Adams, Mark D, Fouts, Derrick E
Publicado 2020