Classification of protein sequences by means of irredundant patterns

por Comin, Matteo, Verzotto, Davide
Publicado 2010

Alignment-free phylogeny of whole genomes using underlying subwords

por Comin, Matteo, Verzotto, Davide
Publicado 2012

Assembly-free genome comparison based on next-generation sequencing reads and variable length patterns

por Comin, Matteo, Schimd, Michele
Publicado 2014

On the comparison of regulatory sequences with multiple resolution Entropic Profiles

por Comin, Matteo, Antonello, Morris
Publicado 2016

Fast comparison of genomic and meta-genomic reads with alignment-free measures based on quality values

por Comin, Matteo, Schimd, Michele
Publicado 2016

Better quality score compression through sequence-based quality smoothing

por Shibuya, Yoshihiro, Comin, Matteo
Publicado 2019

MetaCon: unsupervised clustering of metagenomic contigs with probabilistic k-mers statistics and coverage

por Qian, Jia, Comin, Matteo
Publicado 2019

Fast alignment of reads to a variation graph with application to SNP detection

por Monsu, Maurilio, Comin, Matteo
Publicado 2021

Mining, compressing and classifying with extensible motifs

por Apostolico, Alberto, Comin, Matteo, Parida, Laxmi
Publicado 2006

Clustering of reads with alignment-free measures and quality values

por Comin, Matteo, Leoni, Andrea, Schimd, Michele
Publicado 2015

Higher recall in metagenomic sequence classification exploiting overlapping reads

por Girotto, Samuele, Comin, Matteo, Pizzi, Cinzia
Publicado 2017

FSH: fast spaced seed hashing exploiting adjacent hashes

por Girotto, Samuele, Comin, Matteo, Pizzi, Cinzia
Publicado 2018

Efficient computation of spaced seed hashing with block indexing

por Girotto, Samuele, Comin, Matteo, Pizzi, Cinzia
Publicado 2018

Ultrametric networks: a new tool for phylogenetic analysis

por Apostolico, Alberto, Comin, Matteo, Dress, Andres, Parida, Laxmi
Publicado 2013

Special Issue of the 1st International Applied Bioinformatics Conference (iABC'21)

por Allmer, Jens, Elloumi, Mourad, Comin, Matteo, Hofestädt, Ralf
Publicado 2021

SPRISS: approximating frequent k-mers by sampling reads, and applications

por Santoro, Diego, Pellegrina, Leonardo, Comin, Matteo, Vandin, Fabio
Publicado 2022

Benchmarking of alignment-free sequence comparison methods

por Zielezinski, Andrzej, Girgis, Hani Z., Bernard, Guillaume, Leimeister, Chris-Andre, Tang, Kujin, Dencker, Thomas, Lau, Anna Katharina, Röhling, Sophie, Choi, Jae Jin, Waterman, Michael S., Comin, Matteo, Kim, Sung-Hou, Vinga, Susana, Almeida, Jonas S., Chan, Cheong Xin, James, Benjamin T., Sun, Fengzhu, Morgenstern, Burkhard, Karlowski, Wojciech M.
Publicado 2019