aaHash: recursive amino acid sequence hashing

por Wong, Johnathan, Kazemi, Parham, Coombe, Lauren, Warren, René L., Birol, Inanç
Publicado 2023

aaHash: recursive amino acid sequence hashing

por Wong, Johnathan, Kazemi, Parham, Coombe, Lauren, Warren, René L, Birol, Inanç
Publicado 2023

ARCS: scaffolding genome drafts with linked reads

por Yeo, Sarah, Coombe, Lauren, Warren, René L, Chu, Justin, Birol, Inanç
Publicado 2018

ntJoin: Fast and lightweight assembly-guided scaffolding using minimizer graphs

por Coombe, Lauren, Nikolić, Vladimir, Chu, Justin, Birol, Inanc, Warren, René L
Publicado 2020

ntEdit+Sealer: Efficient Targeted Error Resolution and Automated Finishing of Long‐Read Genome Assemblies

por Li, Janet X., Coombe, Lauren, Wong, Johnathan, Birol, Inanç, Warren, René L.
Publicado 2022

LongStitch: high-quality genome assembly correction and scaffolding using long reads

por Coombe, Lauren, Li, Janet X., Lo, Theodora, Wong, Johnathan, Nikolic, Vladimir, Warren, René L., Birol, Inanc
Publicado 2021

ARKS: chromosome-scale scaffolding of human genome drafts with linked read kmers

por Coombe, Lauren, Zhang, Jessica, Vandervalk, Benjamin P., Chu, Justin, Jackman, Shaun D., Birol, Inanc, Warren, René L.
Publicado 2018

Linear time complexity de novo long read genome assembly with GoldRush

por Wong, Johnathan, Coombe, Lauren, Nikolić, Vladimir, Zhang, Emily, Nip, Ka Ming, Sidhu, Puneet, Warren, René L., Birol, Inanç
Publicado 2023

RResolver: efficient short-read repeat resolution within ABySS

por Nikolić, Vladimir, Afshinfard, Amirhossein, Chu, Justin, Wong, Johnathan, Coombe, Lauren, Nip, Ka Ming, Warren, René L., Birol, Inanç
Publicado 2022

ntEdit: scalable genome sequence polishing

por Warren, René L, Coombe, Lauren, Mohamadi, Hamid, Zhang, Jessica, Jaquish, Barry, Isabel, Nathalie, Jones, Steven J M, Bousquet, Jean, Bohlmann, Joerg, Birol, Inanç
Publicado 2019

ABySS 2.0: resource-efficient assembly of large genomes using a Bloom filter

por Jackman, Shaun D., Vandervalk, Benjamin P., Mohamadi, Hamid, Chu, Justin, Yeo, Sarah, Hammond, S. Austin, Jahesh, Golnaz, Khan, Hamza, Coombe, Lauren, Warren, Rene L., Birol, Inanc
Publicado 2017

Tigmint: correcting assembly errors using linked reads from large molecules

por Jackman, Shaun D., Coombe, Lauren, Chu, Justin, Warren, Rene L., Vandervalk, Benjamin P., Yeo, Sarah, Xue, Zhuyi, Mohamadi, Hamid, Bohlmann, Joerg, Jones, Steven J.M., Birol, Inanc
Publicado 2018

The genome of the forest insect pest Pissodes strobi reveals genome expansion and evidence of a Wolbachia endosymbiont

por Gagalova, Kristina K, Whitehill, Justin G A, Culibrk, Luka, Lin, Diana, Lévesque-Tremblay, Véronique, Keeling, Christopher I, Coombe, Lauren, Yuen, Macaire M S, Birol, Inanç, Bohlmann, Jörg, Jones, Steven J M
Publicado 2022

Mining Amphibian and Insect Transcriptomes for Antimicrobial Peptide Sequences with rAMPage

por Lin, Diana, Sutherland, Darcy, Aninta, Sambina Islam, Louie, Nathan, Nip, Ka Ming, Li, Chenkai, Yanai, Anat, Coombe, Lauren, Warren, René L., Helbing, Caren C., Hoang, Linda M. N., Birol, Inanc
Publicado 2022

Genomic virulence features of Beauveria bassiana as a biocontrol agent for the mountain pine beetle population

por Li, Janet X., Fernandez, Kleinberg X., Ritland, Carol, Jancsik, Sharon, Engelhardt, Daniel B., Coombe, Lauren, Warren, René L., van Belkum, Marco J., Carroll, Allan L., Vederas, John C., Bohlmann, Joerg, Birol, Inanc
Publicado 2023

Assembly of the Complete Sitka Spruce Chloroplast Genome Using 10X Genomics’ GemCode Sequencing Data

por Coombe, Lauren, Warren, René L., Jackman, Shaun D., Yang, Chen, Vandervalk, Benjamin P., Moore, Richard A., Pleasance, Stephen, Coope, Robin J., Bohlmann, Joerg, Holt, Robert A., Jones, Steven J. M., Birol, Inanc
Publicado 2016

Complete Mitochondrial Genome of a Gymnosperm, Sitka Spruce (Picea sitchensis), Indicates a Complex Physical Structure

por Jackman, Shaun D, Coombe, Lauren, Warren, René L, Kirk, Heather, Trinh, Eva, MacLeod, Tina, Pleasance, Stephen, Pandoh, Pawan, Zhao, Yongjun, Coope, Robin J, Bousquet, Jean, Bohlmann, Joerg, Jones, Steven J M, Birol, Inanc
Publicado 2020

Associating Biological Activity and Predicted Structure of Antimicrobial Peptides from Amphibians and Insects

por Richter, Amelia, Sutherland, Darcy, Ebrahimikondori, Hossein, Babcock, Alana, Louie, Nathan, Li, Chenkai, Coombe, Lauren, Lin, Diana, Warren, René L., Yanai, Anat, Kotkoff, Monica, Helbing, Caren C., Hof, Fraser, Hoang, Linda M. N., Birol, Inanc
Publicado 2022

Complete Chloroplast Genome Sequence of a Black Spruce (Picea mariana) from Eastern Canada

por Lo, Theodora, Coombe, Lauren, Lin, Diana, Warren, René L., Kirk, Heather, Pandoh, Pawan, Zhao, Yongjun, Moore, Richard A., Mungall, Andrew J., Ritland, Carol, Bousquet, Jean, Jones, Steven J. M., Bohlmann, Joerg, Thomson, Ashley, Birol, Inanc
Publicado 2020

The Genome of the North American Brown Bear or Grizzly: Ursus arctos ssp. horribilis

por Taylor, Gregory A., Kirk, Heather, Coombe, Lauren, Jackman, Shaun D., Chu, Justin, Tse, Kane, Cheng, Dean, Chuah, Eric, Pandoh, Pawan, Carlsen, Rebecca, Zhao, Yongjun, Mungall, Andrew J., Moore, Richard, Birol, Inanc, Franke, Maria, Marra, Marco A., Dutton, Christopher, Jones, Steven J. M.
Publicado 2018