GestAltNet: aggregation and attention to improve deep learning of gestational age from placental whole-slide images

por Mobadersany, Pooya, Cooper, Lee A. D., Goldstein, Jeffery A.
Publicado 2021

Automated Deep Learning-Based Diagnosis and Molecular Characterization of Acute Myeloid Leukemia using Flow Cytometry

por Lewis, Joshua E., Cooper, Lee A.D., Jaye, David L., Pozdnyakova, Olga
Publicado 2023

Understanding the Impact of ErbB Activating Events and Signal Transduction on Antigen Processing and Presentation: MHC Expression as a Model

por Kersh, Anna E., Sasaki, Maiko, Cooper, Lee A., Kissick, Haydn T., Pollack, Brian P.
Publicado 2016

TASI: A software tool for spatial-temporal quantification of tumor spheroid dynamics

por Hou, Yue, Konen, Jessica, Brat, Daniel J., Marcus, Adam I., Cooper, Lee A. D.
Publicado 2018

High expression of MKK3 is associated with worse clinical outcomes in African American breast cancer patients

por Yang, Xuan, Amgad, Mohamed, Cooper, Lee A. D., Du, Yuhong, Fu, Haian, Ivanov, Andrey A.
Publicado 2020

Novel genotype-phenotype associations in human cancers enabled by advanced molecular platforms and computational analysis of whole slide images

por Cooper, Lee A.D., Kong, Jun, Gutman, David A., Dunn, William D., Nalisnik, Michael, Brat, Daniel J.
Publicado 2015

Tissue contamination challenges the credibility of machine learning models in real world digital pathology

por Irmakci, Ismail, Nateghi, Ramin, Zhou, Rujoi, Ross, Ashley E., Yang, Ximing J., Cooper, Lee A. D., Goldstein, Jeffery A.
Publicado 2023

Learning from crowds in digital pathology using scalable variational Gaussian processes

por López-Pérez, Miguel, Amgad, Mohamed, Morales-Álvarez, Pablo, Ruiz, Pablo, Cooper, Lee A. D., Molina, Rafael, Katsaggelos, Aggelos K.
Publicado 2021

Machine-Based Detection and Classification for Bone Marrow Aspirate Differential Counts: Initial Development Focusing on Non-Neoplastic Cells

por Chandradevan, Ramraj, Aljudi, Ahmed A., Drumheller, Bradley R., Kunananthaseelan, Nilakshan, Amgad, Mohamed, Gutman, David A., Cooper, Lee A.D., Jaye, David L.
Publicado 2019

Interactive phenotyping of large-scale histology imaging data with HistomicsML

por Nalisnik, Michael, Amgad, Mohamed, Lee, Sanghoon, Halani, Sameer H., Velazquez Vega, Jose Enrique, Brat, Daniel J., Gutman, David A., Cooper, Lee A. D.
Publicado 2017

Predicting cancer outcomes from histology and genomics using convolutional networks

por Mobadersany, Pooya, Yousefi, Safoora, Amgad, Mohamed, Gutman, David A., Barnholtz-Sloan, Jill S., Velázquez Vega, José E., Brat, Daniel J., Cooper, Lee A. D.
Publicado 2018

The Proneural Molecular Signature Is Enriched in Oligodendrogliomas and Predicts Improved Survival among Diffuse Gliomas

por Cooper, Lee A. D., Gutman, David A., Long, Qi, Johnson, Brent A., Cholleti, Sharath R., Kurc, Tahsin, Saltz, Joel H., Brat, Daniel J., Moreno, Carlos S.
Publicado 2010

Somatic mutations associated with MRI-derived volumetric features in glioblastoma

por Gutman, David A., Dunn, William D., Grossmann, Patrick, Cooper, Lee A. D., Holder, Chad A., Ligon, Keith L., Alexander, Brian M., Aerts, Hugo J. W. L.
Publicado 2015

A high-performance spatial database based approach for pathology imaging algorithm evaluation

por Wang, Fusheng, Kong, Jun, Gao, Jingjing, Cooper, Lee A.D., Kurc, Tahsin, Zhou, Zhengwen, Adler, David, Vergara-Niedermayr, Cristobal, Katigbak, Bryan, Brat, Daniel J., Saltz, Joel H.
Publicado 2013

Machine-Based Morphologic Analysis of Glioblastoma Using Whole-Slide Pathology Images Uncovers Clinically Relevant Molecular Correlates

por Kong, Jun, Cooper, Lee A. D., Wang, Fusheng, Gao, Jingjing, Teodoro, George, Scarpace, Lisa, Mikkelsen, Tom, Schniederjan, Matthew J., Moreno, Carlos S., Saltz, Joel H., Brat, Daniel J.
Publicado 2013

MEDICI: Mining Essentiality Data to Identify Critical Interactions for Cancer Drug Target Discovery and Development

por Harati, Sahar, Cooper, Lee A. D., Moran, Josue D., Giuste, Felipe O., Du, Yuhong, Ivanov, Andrei A., Johns, Margaret A., Khuri, Fadlo R., Fu, Haian, Moreno, Carlos S.
Publicado 2017

Predicting clinical outcomes from large scale cancer genomic profiles with deep survival models

por Yousefi, Safoora, Amrollahi, Fatemeh, Amgad, Mohamed, Dong, Chengliang, Lewis, Joshua E., Song, Congzheng, Gutman, David A., Halani, Sameer H., Velazquez Vega, Jose Enrique, Brat, Daniel J., Cooper, Lee A. D.
Publicado 2017

A Systematic Pipeline for the Objective Comparison of Whole-Brain Spectroscopic MRI with Histology in Biopsy Specimens from Grade 3 Glioma

por Cordova, J. Scott, Gurbani, Saumya S., Olson, Jeffrey J., Liang, Zhongxing, Cooper, Lee A. D., Shu, Hui-Kuo G., Schreibmann, Eduard, Neill, Stewart G., Hadjipanayis, Constantinos G., Holder, Chad A., Shim, Hyunsuk
Publicado 2016

Deep learning enables robust assessment and selection of human blastocysts after in vitro fertilization

por Khosravi, Pegah, Kazemi, Ehsan, Zhan, Qiansheng, Malmsten, Jonas E., Toschi, Marco, Zisimopoulos, Pantelis, Sigaras, Alexandros, Lavery, Stuart, Cooper, Lee A. D., Hickman, Cristina, Meseguer, Marcos, Rosenwaks, Zev, Elemento, Olivier, Zaninovic, Nikica, Hajirasouliha, Iman
Publicado 2019

Integrated morphologic analysis for the identification and characterization of disease subtypes

por Cooper, Lee A D, Kong, Jun, Gutman, David A, Wang, Fusheng, Gao, Jingjing, Appin, Christina, Cholleti, Sharath, Pan, Tony, Sharma, Ashish, Scarpace, Lisa, Mikkelsen, Tom, Kurc, Tahsin, Moreno, Carlos S, Brat, Daniel J, Saltz, Joel H
Publicado 2012