Recombination Speeds Adaptation by Reducing Competition between Beneficial Mutations in Populations of Escherichia coli

por Cooper, Tim F
Publicado 2007

Metabolism gets lucky

por Cooper, Tim F
Publicado 2010

Experimental evolution with E. coli in diverse resource environments. I. Fluctuating environments promote divergence of replicate populations

por Cooper, Tim F, Lenski, Richard E
Publicado 2010

Dynamics of bacterial adaptation

por Lai, Huei-Yi, Cooper, Tim F.
Publicado 2021

The cost of evolved constitutive lac gene expression is usually, but not always, maintained during evolution of generalist populations

por Phillips, Kelly N., Cooper, Tim F.
Publicado 2021

Identification and dynamics of a beneficial mutation in a long-term evolution experiment with Escherichia coli

por Stanek, Mark T, Cooper, Tim F, Lenski, Richard E
Publicado 2009

Effect of random and hub gene disruptions on environmental and mutational robustness in Escherichia coli

por Cooper, Tim F, Morby, Andrew P, Gunn, Annabel, Schneider, Dominique
Publicado 2006

Robust Detection of Hierarchical Communities from Escherichia coli Gene Expression Data

por Treviño, Santiago, Sun, Yudong, Cooper, Tim F., Bassler, Kevin E.
Publicado 2012

Expression Profiles Reveal Parallel Evolution of Epistatic Interactions Involving the CRP Regulon in Escherichia coli

por Cooper, Tim F, Remold, Susanna K, Lenski, Richard E, Schneider, Dominique
Publicado 2008

The Environment Affects Epistatic Interactions to Alter the Topology of an Empirical Fitness Landscape

por Flynn, Kenneth M., Cooper, Tim F., Moore, Francisco B-G., Cooper, Vaughn S.
Publicado 2013

Historical Contingency Causes Divergence in Adaptive Expression of the lac Operon

por Karkare, Kedar, Lai, Huei-Yi, Azevedo, Ricardo B.R., Cooper, Tim F.
Publicado 2021

Fitness of evolving bacterial populations is contingent on deep and shallow history but only shallow history creates predictable patterns

por Smith, Chelsea E., Smith, Adam N. H., Cooper, Tim F., Moore, Francisco B.-G.
Publicado 2022

The influence of depth and a subsea pipeline on fish assemblages and commercially fished species

por Bond, Todd, Partridge, Julian C., Taylor, Michael D., Cooper, Tim F., McLean, Dianne L.
Publicado 2018

Adaptive Evolution of the Lactose Utilization Network in Experimentally Evolved Populations of Escherichia coli

por Quan, Selwyn, Ray, J. Christian J., Kwota, Zakari, Duong, Trang, Balázsi, Gábor, Cooper, Tim F., Monds, Russell D.
Publicado 2012

Cellular Growth Arrest and Persistence from Enzyme Saturation

por Ray, J. Christian J., Wickersheim, Michelle L., Jalihal, Ameya P., Adeshina, Yusuf O., Cooper, Tim F., Balázsi, Gábor
Publicado 2016

Diversity in lac Operon Regulation among Diverse Escherichia coli Isolates Depends on the Broader Genetic Background but Is Not Explained by Genetic Relatedness

por Phillips, Kelly N., Widmann, Scott, Lai, Huei-Yi, Nguyen, Jennifer, Ray, J. Christian J., Balázsi, Gábor, Cooper, Tim F.
Publicado 2019

Bacterial Evolution in High-Osmolarity Environments

por Cesar, Spencer, Anjur-Dietrich, Maya, Yu, Brian, Li, Ethan, Rojas, Enrique, Neff, Norma, Cooper, Tim F., Huang, Kerwyn Casey
Publicado 2020

Effects of Beneficial Mutations in pykF Gene Vary over Time and across Replicate Populations in a Long-Term Experiment with Bacteria

por Peng, Fen, Widmann, Scott, Wünsche, Andrea, Duan, Kristina, Donovan, Katherine A, Dobson, Renwick C J, Lenski, Richard E, Cooper, Tim F
Publicado 2018

Predicting microbial growth in a mixed culture from growth curve data

por Ram, Yoav, Dellus-Gur, Eynat, Bibi, Maayan, Karkare, Kedar, Obolski, Uri, Feldman, Marcus W., Cooper, Tim F., Berman, Judith, Hadany, Lilach
Publicado 2019