Prediction of function in protein superfamilies

por Copley, Shelley D
Publicado 2009

Lateral gene transfer and parallel evolution in the history of glutathione biosynthesis genes

por Copley, Shelley D, Dhillon, Jasvinder K
Publicado 2002

Genome-Wide Analysis of Transcriptional Changes and Genes That Contribute to Fitness during Degradation of the Anthropogenic Pollutant Pentachlorophenol by Sphingobium chlorophenol...

por Flood, Jake J., Copley, Shelley D.
Publicado 2018

MotifCluster: an interactive online tool for clustering and visualizing sequences using shared motifs

por Hamady, Micah, Widmann, Jeremy, Copley, Shelley D, Knight, Rob
Publicado 2008

Amplicon Remodeling and Genomic Mutations Drive Population Dynamics after Segmental Amplification

por Morgenthaler, Andrew B, Fritts, Ryan K, Copley, Shelley D
Publicado 2021

CodaChrome: a tool for the visualization of proteome conservation across all fully sequenced bacterial genomes

por Rokicki, Joe, Knox, David, Dowell, Robin D, Copley, Shelley D
Publicado 2014

A Radical Intermediate in the Conversion of Pentachlorophenol to Tetrachlorohydroquinone by Sphingobium chlorophenolicum

por Rudolph, Johannes, Erbse, Annette H., Behlen, Linda S., Copley, Shelley D.
Publicado 2014

Differential Effects of a Mutation on the Normal and Promiscuous Activities of Orthologs: Implications for Natural and Directed Evolution

por Khanal, Akhil, Yu McLoughlin, Sean, Kershner, Jamie P., Copley, Shelley D.
Publicado 2015

Three serendipitous pathways in E. coli can bypass a block in pyridoxal-5′-phosphate synthesis

por Kim, Juhan, Kershner, Jamie P, Novikov, Yehor, Shoemaker, Richard K, Copley, Shelley D
Publicado 2010

The Whole Genome Sequence of Sphingobium chlorophenolicum L-1: Insights into the Evolution of the Pentachlorophenol Degradation Pathway

por Copley, Shelley D., Rokicki, Joseph, Turner, Pernilla, Daligault, Hajnalka, Nolan, Matt, Land, Miriam
Publicado 2012

A versatile and highly efficient method for scarless genome editing in Escherichia coli and Salmonella enterica

por Kim, Juhan, Webb, Anthony M, Kershner, Jamie P, Blaskowski, Stephen, Copley, Shelley D
Publicado 2014

Synonymous mutations make dramatic contributions to fitness when growth is limited by a weak-link enzyme

por Kristofich, JohnCarlo, Morgenthaler, Andrew B., Kinney, Wallis R., Ebmeier, Christopher C., Snyder, Daniel J., Old, William M., Cooper, Vaughn S., Copley, Shelley D.
Publicado 2018

Mutations that improve efficiency of a weak-link enzyme are rare compared to adaptive mutations elsewhere in the genome

por Morgenthaler, Andrew B, Kinney, Wallis R, Ebmeier, Christopher C, Walsh, Corinne M, Snyder, Daniel J, Cooper, Vaughn S, Old, William M, Copley, Shelley D
Publicado 2019

Hidden resources in the Escherichia coli genome restore PLP synthesis and robust growth after deletion of the essential gene pdxB

por Kim, Juhan, Flood, Jake J., Kristofich, Michael R., Gidfar, Cyrus, Morgenthaler, Andrew B., Fuhrer, Tobias, Sauer, Uwe, Snyder, Daniel, Cooper, Vaughn S., Ebmeier, Christopher C., Old, William M., Copley, Shelley D.
Publicado 2019