checkMyIndex: a web-based R/Shiny interface for choosing compatible sequencing indexes

por Varet, Hugo, Coppée, Jean-Yves
Publicado 2019

SARTools: A DESeq2- and EdgeR-Based R Pipeline for Comprehensive Differential Analysis of RNA-Seq Data

por Varet, Hugo, Brillet-Guéguen, Loraine, Coppée, Jean-Yves, Dillies, Marie-Agnès
Publicado 2016

Identified members of the Streptomyces lividans AdpA regulon involved in differentiation and secondary metabolism

por Guyet, Aurélie, Benaroudj, Nadia, Proux, Caroline, Gominet, Myriam, Coppée, Jean-Yves, Mazodier, Philippe
Publicado 2014

The PfAlba1 RNA-binding protein is an important regulator of translational timing in Plasmodium falciparum blood stages

por Vembar, Shruthi Sridhar, Macpherson, Cameron Ross, Sismeiro, Odile, Coppée, Jean-Yves, Scherf, Artur
Publicado 2015

Distinct Transcriptional Signatures of Bone Marrow-Derived C57BL/6 and DBA/2 Dendritic Leucocytes Hosting Live Leishmania amazonensis Amastigotes

por Giraud, Emilie, Lecoeur, Hervé, Soubigou, Guillaume, Coppée, Jean-Yves, Milon, Geneviève, Prina, Eric, Lang, Thierry
Publicado 2012

The Legionella pneumophila genome evolved to accommodate multiple regulatory mechanisms controlled by the CsrA-system

por Sahr, Tobias, Rusniok, Christophe, Impens, Francis, Oliva, Giulia, Sismeiro, Odile, Coppée, Jean-Yves, Buchrieser, Carmen
Publicado 2017

Genomic determinants for initiation and length of natural antisense transcripts in Entamoeba histolytica

por Mornico, Damien, Hon, Chung-Chau, Koutero, Mikael, Weber, Christian, Coppee, Jean-Yves, Dillies, Marie-Agnes, Guillen, Nancy
Publicado 2020

Sleeping ribosomes: Bacterial signaling triggers RaiA mediated persistence to aminoglycosides

por Lang, Manon, Krin, Evelyne, Korlowski, Chloé, Sismeiro, Odile, Varet, Hugo, Coppée, Jean-Yves, Mazel, Didier, Baharoglu, Zeynep
Publicado 2021

Overexpression of the Heterochromatinization Factor BAHD1 in HEK293 Cells Differentially Reshapes the DNA Methylome on Autosomes and X Chromosome

por Libertini, Emanuele, Lebreton, Alice, Lakisic, Goran, Dillies, Marie-Agnès, Beck, Stephan, Coppée, Jean-Yves, Cossart, Pascale, Bierne, Hélène
Publicado 2015

Enteric bacteria boost defences against oxidative stress in Entamoeba histolytica

por Varet, Hugo, Shaulov, Yana, Sismeiro, Odile, Trebicz-Geffen, Meirav, Legendre, Rachel, Coppée, Jean-Yves, Ankri, Serge, Guillen, Nancy
Publicado 2018

Transcriptional signatures of BALB/c mouse macrophages housing multiplying Leishmania amazonensis amastigotes

por Fortéa, José Osorio y, de La Llave, Emilie, Regnault, Béatrice, Coppée, Jean-Yves, Milon, Geneviève, Lang, Thierry, Prina, Eric
Publicado 2009

Identification of the Virulence Landscape Essential for Entamoeba histolytica Invasion of the Human Colon

por Thibeaux, Roman, Weber, Christian, Hon, Chung-Chau, Dillies, Marie-Agnès, Avé, Patrick, Coppée, Jean-Yves, Labruyère, Elisabeth, Guillén, Nancy
Publicado 2013

Transcytosis subversion by M cell-to-enterocyte spread promotes Shigella flexneri and Listeria monocytogenes  intracellular bacterial dissemination

por Rey, Camille, Chang, Yuen-Yan, Latour-Lambert, Patricia, Varet, Hugo, Proux, Caroline, Legendre, Rachel, Coppée, Jean-Yves, Enninga, Jost
Publicado 2020

Field-based evidence of fast and global increase of Plasmodium falciparum drug-resistance by DNA-microarrays and PCR/RFLP in Niger

por Ibrahim, Maman Laminou, Steenkeste, Nicolas, Khim, Nimol, Adam, Hadiza Hassane, Konaté, Lassana, Coppée, Jean-Yves, Ariey, Fredéric, Duchemin, Jean-Bernard
Publicado 2009

Microarray estimation of genomic inter-strain variability in the genus Ectocarpus (Phaeophyceae)

por Dittami, Simon M, Proux, Caroline, Rousvoal, Sylvie, Peters, Akira F, Cock, J Mark, Coppée, Jean-Yves, Boyen, Catherine, Tonon, Thierry
Publicado 2011

RNA sequencing revealed novel actors of the acquisition of drug resistance in Candida albicans

por Dhamgaye, Sanjiveeni, Bernard, Maria, Lelandais, Gaelle, Sismeiro, Odile, Lemoine, Sophie, Coppée, Jean-Yves, Le Crom, Stéphane, Prasad, Rajendra, Devaux, Frédéric
Publicado 2012

Starvation, Together with the SOS Response, Mediates High Biofilm-Specific Tolerance to the Fluoroquinolone Ofloxacin

por Bernier, Steve P., Lebeaux, David, DeFrancesco, Alicia S., Valomon, Amandine, Soubigou, Guillaume, Coppée, Jean-Yves, Ghigo, Jean-Marc, Beloin, Christophe
Publicado 2013

Extensive transcriptome analysis correlates the plasticity of Entamoeba histolytica pathogenesis to rapid phenotype changes depending on the environment

por Weber, Christian, Koutero, Mikael, Dillies, Marie-Agnes, Varet, Hugo, Lopez-Camarillo, Cesar, Coppée, Jean Yves, Hon, Chung-Chau, Guillén, Nancy
Publicado 2016

Enzymatic synthesis of random sequences of RNA and RNA analogues by DNA polymerase theta mutants for the generation of aptamer libraries

por Randrianjatovo-Gbalou, Irina, Rosario, Sandrine, Sismeiro, Odile, Varet, Hugo, Legendre, Rachel, Coppée, Jean-Yves, Huteau, Valérie, Pochet, Sylvie, Delarue, Marc
Publicado 2018

RNA Sequencing Reveals Widespread Transcription of Natural Antisense RNAs in Entamoeba Species

por Mornico, Damien, Hon, Chung-Chau, Koutero, Mikael, Weber, Christian, Coppée, Jean-Yves, Clark, C Graham, Dillies, Marie-Agnes, Guillen, Nancy
Publicado 2022