Protocol for the isolation, sequencing, and analysis of the gut phageome from human fecal samples

por Bikel, Shirley, Gallardo-Becerra, Luigui, Cornejo-Granados, Fernanda, Ochoa-Leyva, Adrian
Publicado 2022

The Two-Faced Role of crAssphage Subfamilies in Obesity and Metabolic Syndrome: Between Good and Evil

por Cervantes-Echeverría, Melany, Gallardo-Becerra, Luigui, Cornejo-Granados, Fernanda, Ochoa-Leyva, Adrian
Publicado 2023

Perspectives in Searching Antimicrobial Peptides (AMPs) Produced by the Microbiota

por Gallardo-Becerra, Luigui, Cervantes-Echeverría, Melany, Cornejo-Granados, Fernanda, Vazquez-Morado, Luis E., Ochoa-Leyva, Adrian
Publicado 2023

A meta-analysis reveals the environmental and host factors shaping the structure and function of the shrimp microbiota

por Cornejo-Granados, Fernanda, Gallardo-Becerra, Luigui, Leonardo-Reza, Miriam, Ochoa-Romo, Juan Pablo, Ochoa-Leyva, Adrian
Publicado 2018

Functional and taxonomic classification of a greenhouse water drain metagenome

por López-Leal, Gamaliel, Cornejo-Granados, Fernanda, Hurtado-Ramírez, Juan Manuel, Mendoza-Vargas, Alfredo, Ochoa-Leyva, Adrian
Publicado 2018

HLA-Haplotypes Influence Microbiota Structure in Northwestern Mexican Schoolchildren Predisposed for Celiac Disease or Type 1 Diabetes

por Aguayo-Patrón, Sandra V., Trujillo-Rivera, Omar A., Cornejo-Granados, Fernanda, Ochoa-Leyva, Adrian, Calderón de la Barca, Ana M.
Publicado 2023

Complete genome sequence and characterization of a novel Enterococcus faecium with probiotic potential isolated from the gut of Litopenaeus vannamei

por Chino de la Cruz, Citlali Melissa, Cornejo-Granados, Fernanda, Gallardo-Becerra, Luigui, Rodríguez-Alegría, María Elena, Ochoa-Leyva, Adrian, López Munguía, Agustín
Publicado 2023

Combining metagenomics, metatranscriptomics and viromics to explore novel microbial interactions: towards a systems-level understanding of human microbiome

por Bikel, Shirley, Valdez-Lara, Alejandra, Cornejo-Granados, Fernanda, Rico, Karina, Canizales-Quinteros, Samuel, Soberón, Xavier, Del Pozo-Yauner, Luis, Ochoa-Leyva, Adrián
Publicado 2015

OTUs and ASVs Produce Comparable Taxonomic and Diversity from Shrimp Microbiota 16S Profiles Using Tailored Abundance Filters

por García-López, Rodrigo, Cornejo-Granados, Fernanda, Lopez-Zavala, Alonso A., Cota-Huízar, Andrés, Sotelo-Mundo, Rogerio R., Gómez-Gil, Bruno, Ochoa-Leyva, Adrian
Publicado 2021

Whole-genome of Mexican-crAssphage isolated from the human gut microbiome

por Cervantes-Echeverría, Melany, Equihua-Medina, Edgar, Cornejo-Granados, Fernanda, Hernández-Reyna, Abigail, Sánchez, Filiberto, López-Contreras, Blanca Estela, Canizales-Quinteros, Samuel, Ochoa-Leyva, Adrián
Publicado 2018

Secretome characterization of clinical isolates from the Mycobacterium abscessus complex provides insight into antigenic differences

por Cornejo-Granados, Fernanda, Kohl, Thomas A., Sotomayor, Flor Vásquez, Andres, Sönke, Hernández-Pando, Rogelio, Hurtado-Ramirez, Juan Manuel, Utpatel, Christian, Niemann, Stefan, Maurer, Florian P., Ochoa-Leyva, Adrian
Publicado 2021

Secretome Prediction of Two M. tuberculosis Clinical Isolates Reveals Their High Antigenic Density and Potential Drug Targets

por Cornejo-Granados, Fernanda, Zatarain-Barrón, Zyanya L., Cantu-Robles, Vito A., Mendoza-Vargas, Alfredo, Molina-Romero, Camilo, Sánchez, Filiberto, Del Pozo-Yauner, Luis, Hernández-Pando, Rogelio, Ochoa-Leyva, Adrián
Publicado 2017

Metatranscriptomic analysis to define the Secrebiome, and 16S rRNA profiling of the gut microbiome in obesity and metabolic syndrome of Mexican children

por Gallardo-Becerra, Luigui, Cornejo-Granados, Fernanda, García-López, Rodrigo, Valdez-Lara, Alejandra, Bikel, Shirley, Canizales-Quinteros, Samuel, López-Contreras, Blanca E., Mendoza-Vargas, Alfredo, Nielsen, Henrik, Ochoa-Leyva, Adrián
Publicado 2020

Microbiome of Pacific Whiteleg shrimp reveals differential bacterial community composition between Wild, Aquacultured and AHPND/EMS outbreak conditions

por Cornejo-Granados, Fernanda, Lopez-Zavala, Alonso A., Gallardo-Becerra, Luigui, Mendoza-Vargas, Alfredo, Sánchez, Filiberto, Vichido, Rodrigo, Brieba, Luis G., Viana, Maria Teresa, Sotelo-Mundo, Rogerio R., Ochoa-Leyva, Adrián
Publicado 2017

Doing More with Less: A Comparison of 16S Hypervariable Regions in Search of Defining the Shrimp Microbiota

por García-López, Rodrigo, Cornejo-Granados, Fernanda, Lopez-Zavala, Alonso A., Sánchez-López, Filiberto, Cota-Huízar, Andrés, Sotelo-Mundo, Rogerio R., Guerrero, Abraham, Mendoza-Vargas, Alfredo, Gómez-Gil, Bruno, Ochoa-Leyva, Adrian
Publicado 2020

Targeted RNA-Seq Reveals the M. tuberculosis Transcriptome from an In Vivo Infection Model

por Cornejo-Granados, Fernanda, López-Leal, Gamaliel, Mata-Espinosa, Dulce A., Barrios-Payán, Jorge, Marquina-Castillo, Brenda, Equihua-Medina, Edgar, Zatarain-Barrón, Zyanya L., Molina-Romero, Camilo, Hernández-Pando, Rogelio, Ochoa-Leyva, Adrian
Publicado 2021

Clinical and pathological characteristics associated with the presence of the IS6110 Mycobacterim tuberculosis transposon in neoplastic cells from non-small cell lung cancer patien...

por Arrieta, Oscar, Molina-Romero, Camilo, Cornejo-Granados, Fernanda, Marquina-Castillo, Brenda, Avilés-Salas, Alejandro, López-Leal, Gamaliel, Cardona, Andrés F., Ortega-Gómez, Alette, Orozco-Morales, Mario, Ochoa-Leyva, Adrián, Hernandez-Pando, Rogelio
Publicado 2022

A novel approach for human whole transcriptome analysis based on absolute gene expression of microarray data

por Bikel, Shirley, Jacobo-Albavera, Leonor, Sánchez-Muñoz, Fausto, Cornejo-Granados, Fernanda, Canizales-Quinteros, Samuel, Soberón, Xavier, Sotelo-Mundo, Rogerio R., del Río-Navarro, Blanca E., Mendoza-Vargas, Alfredo, Sánchez, Filiberto, Ochoa-Leyva, Adrian
Publicado 2017

Alterations of the Gut Microbiome Associated to Methane Metabolism in Mexican Children with Obesity

por Murga-Garrido, Sofía Magdalena, Orbe-Orihuela, Yaneth Citlalli, Díaz-Benítez, Cinthya Estefhany, Castañeda-Márquez, Ana Cristina, Cornejo-Granados, Fernanda, Ochoa-Leyva, Adrian, Sanchez-Flores, Alejandro, Cruz, Miguel, Burguete-García, Ana Isabel, Lagunas-Martínez, Alfredo
Publicado 2022

Agavin induces beneficial microbes in the shrimp microbiota under farming conditions

por Ochoa-Romo, Juan Pablo, Cornejo-Granados, Fernanda, Lopez-Zavala, Alonso A., Viana, María Teresa, Sánchez, Filiberto, Gallardo-Becerra, Luigui, Luque-Villegas, Mirna, Valdez-López, Yesenia, Sotelo-Mundo, Rogerio R., Cota-Huízar, Andrés, López-Munguia, Agustín, Ochoa-Leyva, Adrian
Publicado 2022