Regeneration, Plasticity, and Induced Molecular Programs in Adult Zebrafish Brain

por Cosacak, Mehmet Ilyas, Papadimitriou, Christos, Kizil, Caghan
Publicado 2015

Alzheimer’s disease, neural stem cells and neurogenesis: cellular phase at single-cell level

por Cosacak, Mehmet Ilyas, Bhattarai, Prabesh, Kizil, Caghan
Publicado 2019

Protocol for Dissection and Dissociation of Zebrafish Telencephalon for Single-Cell Sequencing

por Cosacak, Mehmet Ilyas, Bhattarai, Prabesh, Kizil, Caghan
Publicado 2020

Differentially Expressed tRNA-Derived Small RNAs Co-Sediment Primarily with Non-Polysomal Fractions in Drosophila

por Göktaş, Çağdaş, Yiğit, Hatice, Coşacak, Mehmet İlyas, Akgül, Bünyamin
Publicado 2017

Re-Arrangements in the Cytoplasmic Distribution of Small RNAs Following the Maternal-to-Zygotic Transition in Drosophila Embryos

por Cosacak, Mehmet Ilyas, Yiğit, Hatice, Kizil, Caghan, Akgül, Bünyamin
Publicado 2018

Small RNA data set that includes tRNA-derived fragments from Jurkat cells treated with camptothecin

por Cosacak, Mehmet Ilyas, Erdogan, Ipek, Nalbant, Ayten, Akgul, Bunyamin
Publicado 2018

sox1a:eGFP transgenic line and single-cell transcriptomics reveal the origin of zebrafish intraspinal serotonergic neurons

por Chen, Fushun, Köhler, Melina, Cucun, Gokhan, Takamiya, Masanari, Kizil, Caghan, Cosacak, Mehmet Ilyas, Rastegar, Sepand
Publicado 2023

Single Cell/Nucleus Transcriptomics Comparison in Zebrafish and Humans Reveals Common and Distinct Molecular Responses to Alzheimer’s Disease

por Cosacak, Mehmet Ilyas, Bhattarai, Prabesh, De Jager, Philip L., Menon, Vilas, Tosto, Giuseppe, Kizil, Caghan
Publicado 2022

KYNA/Ahr Signaling Suppresses Neural Stem Cell Plasticity and Neurogenesis in Adult Zebrafish Model of Alzheimer’s Disease

por Siddiqui, Tohid, Bhattarai, Prabesh, Popova, Stanislava, Cosacak, Mehmet Ilyas, Sariya, Sanjeev, Zhang, Yixin, Mayeux, Richard, Tosto, Giuseppe, Kizil, Caghan
Publicado 2021

The Caribbean-Hispanic Alzheimer’s disease brain transcriptome reveals ancestry-specific disease mechanisms

por Felsky, Daniel, Santa-Maria, Ismael, Cosacak, Mehmet Ilyas, French, Leon, Schneider, Julie A., Bennett, David A., De Jager, Philip L., Kizil, Caghan, Tosto, Giuseppe
Publicado 2023

Neuron-glia interaction through Serotonin-BDNF-NGFR axis enables regenerative neurogenesis in Alzheimer’s model of adult zebrafish brain

por Bhattarai, Prabesh, Cosacak, Mehmet Ilyas, Mashkaryan, Violeta, Demir, Sevgican, Popova, Stanislava Dimitrova, Govindarajan, Nambirajan, Brandt, Kerstin, Zhang, Yixin, Chang, Weipang, Ampatzis, Konstantinos, Kizil, Caghan
Publicado 2020

Type 1 Interleukin-4 Signaling Obliterates Mouse Astroglia in vivo but Not in vitro

por Mashkaryan, Violeta, Siddiqui, Tohid, Popova, Stanislava, Cosacak, Mehmet Ilyas, Bhattarai, Prabesh, Brandt, Kerstin, Govindarajan, Nambirajan, Petzold, Andreas, Reinhardt, Susanne, Dahl, Andreas, Lefort, Roger, Kizil, Caghan
Publicado 2020

GATA3 Promotes the Neural Progenitor State but Not Neurogenesis in 3D Traumatic Injury Model of Primary Human Cortical Astrocytes

por Celikkaya, Hilal, Cosacak, Mehmet Ilyas, Papadimitriou, Christos, Popova, Stanislava, Bhattarai, Prabesh, Biswas, Srijeeta Nag, Siddiqui, Tohid, Wistorf, Sabrina, Nevado-Alcalde, Isabel, Naumann, Lisa, Mashkaryan, Violeta, Brandt, Kerstin, Freudenberg, Uwe, Werner, Carsten, Kizil, Caghan
Publicado 2019

Glia-neuron interactions underlie state transitions to generalized seizures

por Diaz Verdugo, Carmen, Myren-Svelstad, Sverre, Aydin, Ecem, Van Hoeymissen, Evelien, Deneubourg, Celine, Vanderhaeghe, Silke, Vancraeynest, Julie, Pelgrims, Robbrecht, Cosacak, Mehmet Ilyas, Muto, Akira, Kizil, Caghan, Kawakami, Koichi, Jurisch-Yaksi, Nathalie, Yaksi, Emre
Publicado 2019

RNA methyltransferase NSun2 deficiency promotes neurodegeneration through epitranscriptomic regulation of tau phosphorylation

por Kim, Yoon A., Siddiqui, Tohid, Blaze, Jennifer, Cosacak, Mehmet Ilyas, Winters, Tristan, Kumar, Atul, Tein, Ellen, Sproul, Andrew A., Teich, Andrew F., Bartolini, Francesca, Akbarian, Schahram, Kizil, Caghan, Hargus, Gunnar, Santa-Maria, Ismael
Publicado 2022

Functional properties of habenular neurons are determined by developmental stage and sequential neurogenesis

por Fore, Stephanie, Acuña-Hinrichsen, Francisca, Mutlu, Kadir Aytac, Bartoszek, Ewelina Magdalena, Serneels, Bram, Faturos, Nicholas Guy, Chau, Khac Thanh Phong, Cosacak, Mehmet Ilyas, Verdugo, Carmen Diaz, Palumbo, Fabrizio, Ringers, Christa, Jurisch-Yaksi, Nathalie, Kizil, Caghan, Yaksi, Emre
Publicado 2020

Nerve growth factor receptor (Ngfr) induces neurogenic plasticity by suppressing reactive astroglial Lcn2/Slc22a17 signaling in Alzheimer’s disease

por Siddiqui, Tohid, Cosacak, Mehmet Ilyas, Popova, Stanislava, Bhattarai, Prabesh, Yilmaz, Elanur, Lee, Annie J., Min, Yuhao, Wang, Xue, Allen, Mariet, İş, Özkan, Atasavum, Zeynep Tansu, Rodriguez-Muela, Natalia, Vardarajan, Badri N., Flaherty, Delaney, Teich, Andrew F., Santa-Maria, Ismael, Freudenberg, Uwe, Werner, Carsten, Tosto, Giuseppe, Mayeux, Richard, Ertekin-Taner, Nilüfer, Kizil, Caghan
Publicado 2023

Diversity and function of motile ciliated cell types within ependymal lineages of the zebrafish brain

por D’Gama, Percival P., Qiu, Tao, Cosacak, Mehmet Ilyas, Rayamajhi, Dheeraj, Konac, Ahsen, Hansen, Jan Niklas, Ringers, Christa, Acuña-Hinrichsen, Francisca, Hui, Subhra P., Olstad, Emilie W., Chong, Yan Ling, Lim, Charlton Kang An, Gupta, Astha, Ng, Chee Peng, Nilges, Benedikt S., Kashikar, Nachiket D., Wachten, Dagmar, Liebl, David, Kikuchi, Kazu, Kizil, Caghan, Yaksi, Emre, Roy, Sudipto, Jurisch-Yaksi, Nathalie
Publicado 2021