Legionellosis Outbreak Associated with Asphalt Paving Machine, Spain, 2009

por Coscollá, Mireia, Fenollar, José, Escribano, Isabel, González-Candelas, Fernando
Publicado 2010

KvarQ: targeted and direct variant calling from fastq reads of bacterial genomes

por Steiner, Andreas, Stucki, David, Coscolla, Mireia, Borrell, Sonia, Gagneux, Sebastien
Publicado 2014

A New Method for Extracting Skin Microbes Allows Metagenomic Analysis of Whole-Deep Skin

por Garcia-Garcerà, Marc, Garcia-Etxebarria, Koldo, Coscollà, Mireia, Latorre, Amparo, Calafell, Francesc
Publicado 2013

Genetic Characterization of Legionella pneumophila Isolated from a Common Watershed in Comunidad Valenciana, Spain

por Sánchez-Busó, Leonor, Coscollá, Mireia, Pinto-Carbó, Marta, Catalán, Vicente, González-Candelas, Fernando
Publicado 2013

Mapping of Genotype–Phenotype Diversity among Clinical Isolates of Mycobacterium tuberculosis by Sequence-Based Transcriptional Profiling

por Rose, Graham, Cortes, Teresa, Comas, Iñaki, Coscolla, Mireia, Gagneux, Sebastien, Young, Douglas B.
Publicado 2013

In Silico Exploration of Mycobacterium tuberculosis Metabolic Networks Shows Host-Associated Convergent Fluxomic Phenotypes

por Santamaria, Guillem, Ruiz-Rodriguez, Paula, Renau-Mínguez, Chantal, Pinto, Francisco R., Coscollá, Mireia
Publicado 2022

Tuberculosis outbreak investigation using phylodynamic analysis

por Kühnert, Denise, Coscolla, Mireia, Brites, Daniela, Stucki, David, Metcalfe, John, Fenner, Lukas, Gagneux, Sebastien, Stadler, Tanja
Publicado 2018

Sequence Diversity in the pe_pgrs Genes of Mycobacterium tuberculosis Is Independent of Human T Cell Recognition

por Copin, Richard, Coscollá, Mireia, Seiffert, Salome N., Bothamley, Graham, Sutherland, Jayne, Mbayo, Georgetta, Gagneux, Sebastien, Ernst, Joel D.
Publicado 2014

Within Host Evolution Selects for a Dominant Genotype of Mycobacterium tuberculosis while T Cells Increase Pathogen Genetic Diversity

por Copin, Richard, Wang, Xueying, Louie, Eddie, Escuyer, Vincent, Coscolla, Mireia, Gagneux, Sebastien, Palmer, Guy H., Ernst, Joel D.
Publicado 2016

Tuberculosis in Swiss captive Asian elephants: microevolution of Mycobacterium tuberculosis characterized by multilocus variable-number tandem-repeat analysis and whole-genome sequ...

por Ghielmetti, Giovanni, Coscolla, Mireia, Ruetten, Maja, Friedel, Ute, Loiseau, Chloé, Feldmann, Julia, Steinmetz, Hanspeter W., Stucki, David, Gagneux, Sebastien
Publicado 2017

Treemmer: a tool to reduce large phylogenetic datasets with minimal loss of diversity

por Menardo, Fabrizio, Loiseau, Chloé, Brites, Daniela, Coscolla, Mireia, Gygli, Sebastian M., Rutaihwa, Liliana K., Trauner, Andrej, Beisel, Christian, Borrell, Sonia, Gagneux, Sebastien
Publicado 2018

Persistent SARS-CoV-2 infection with repeated clinical recurrence in a patient with common variable immunodeficiency

por Cabañero-Navalon, Marta Dafne, Garcia-Bustos, Victor, Ruiz-Rodriguez, Paula, Comas, Iñaki, Coscollá, Mireia, Martinez-Priego, Llúcia, Todolí, José, Moral Moral, Pedro
Publicado 2022

Two New Rapid SNP-Typing Methods for Classifying Mycobacterium tuberculosis Complex into the Main Phylogenetic Lineages

por Stucki, David, Malla, Bijaya, Hostettler, Simon, Huna, Thembela, Feldmann, Julia, Yeboah-Manu, Dorothy, Borrell, Sonia, Fenner, Lukas, Comas, Iñaki, Coscollà, Mireia, Gagneux, Sebastien
Publicado 2012

Lipidomics and genomics of Mycobacterium tuberculosis reveal lineage-specific trends in mycolic acid biosynthesis

por Portevin, Damien, Sukumar, Sudarkodi, Coscolla, Mireia, Shui, Guanghou, Li, Bowen, Guan, Xue Li, Bendt, Anne K, Young, Douglas, Gagneux, Sebastien, Wenk, Markus R
Publicado 2014

Drug resistance-conferring mutations in Mycobacterium tuberculosis from Madang, Papua New Guinea

por Ballif, Marie, Harino, Paul, Ley, Serej, Coscolla, Mireia, Niemann, Stefan, Carter, Robyn, Coulter, Christopher, Borrell, Sonia, Siba, Peter, Phuanukoonnon, Suparat, Gagneux, Sebastien, Beck, Hans-Peter
Publicado 2012

Genomic analysis of Mycobacterium brumae sustains its nonpathogenic and immunogenic phenotype

por Renau-Mínguez, Chantal, Herrero-Abadía, Paula, Ruiz-Rodriguez, Paula, Sentandreu, Vicente, Torrents, Eduard, Chiner-Oms, Álvaro, Torres-Puente, Manuela, Comas, Iñaki, Julián, Esther, Coscolla, Mireia
Publicado 2023

DNA replication fidelity in Mycobacterium tuberculosis is mediated by an ancestral prokaryotic proofreader

por Rock, Jeremy M., Lang, Ulla F., Chase, Michael R., Ford, Christopher B., Gerrick, Elias R., Gawande, Richa, Coscolla, Mireia, Gagneux, Sebastien, Fortune, Sarah M., Lamers, Meindert H.
Publicado 2015

A New Phylogenetic Framework for the Animal-Adapted Mycobacterium tuberculosis Complex

por Brites, Daniela, Loiseau, Chloé, Menardo, Fabrizio, Borrell, Sonia, Boniotti, Maria Beatrice, Warren, Robin, Dippenaar, Anzaan, Parsons, Sven David Charles, Beisel, Christian, Behr, Marcel A., Fyfe, Janet A., Coscolla, Mireia, Gagneux, Sebastien
Publicado 2018

Reference set of Mycobacterium tuberculosis clinical strains: A tool for research and product development

por Borrell, Sònia, Trauner, Andrej, Brites, Daniela, Rigouts, Leen, Loiseau, Chloe, Coscolla, Mireia, Niemann, Stefan, De Jong, Bouke, Yeboah-Manu, Dorothy, Kato-Maeda, Midori, Feldmann, Julia, Reinhard, Miriam, Beisel, Christian, Gagneux, Sebastien
Publicado 2019

Mycobacterium tuberculosis complex lineage 5 exhibits high levels of within-lineage genomic diversity and differing gene content compared to the type strain H37Rv

por Sanoussi, C. N'Dira, Coscolla, Mireia, Ofori-Anyinam, Boatema, Otchere, Isaac Darko, Antonio, Martin, Niemann, Stefan, Parkhill, Julian, Harris, Simon, Yeboah-Manu, Dorothy, Gagneux, Sebastien, Rigouts, Leen, Affolabi, Dissou, de Jong, Bouke C., Meehan, Conor J.
Publicado 2021