Evaluation of PacBio sequencing for full-length bacterial 16S rRNA gene classification

por Wagner, Josef, Coupland, Paul, Browne, Hilary P., Lawley, Trevor D., Francis, Suzanna C., Parkhill, Julian
Publicado 2016

Diversification of bacterial genome content through distinct mechanisms over different timescales

por Croucher, Nicholas J., Coupland, Paul G., Stevenson, Abbie E., Callendrello, Alanna, Bentley, Stephen D., Hanage, William P.
Publicado 2014

Microevolution of Burkholderia pseudomallei during an Acute Infection

por Limmathurotsakul, Direk, Holden, Matthew T. G., Coupland, Paul, Price, Erin P., Chantratita, Narisara, Wuthiekanun, Vanaporn, Amornchai, Premjit, Parkhill, Julian, Peacock, Sharon J.
Publicado 2014

A tale of three next generation sequencing platforms: comparison of Ion Torrent, Pacific Biosciences and Illumina MiSeq sequencers

por Quail, Michael A, Smith, Miriam, Coupland, Paul, Otto, Thomas D, Harris, Simon R, Connor, Thomas R, Bertoni, Anna, Swerdlow, Harold P, Gu, Yong
Publicado 2012

The extant World War 1 dysentery bacillus NCTC1: a genomic analysis

por Baker, Kate S, Mather, Alison E, McGregor, Hannah, Coupland, Paul, Langridge, Gemma C, Day, Martin, Deheer-Graham, Ana, Parkhill, Julian, Russell, Julie E, Thomson, Nicholas R
Publicado 2014

Single-molecule sequencing reveals the molecular basis of multidrug-resistance in ST772 methicillin-resistant Staphylococcus aureus

por Steinig, Eike J, Andersson, Patiyan, Harris, Simon R, Sarovich, Derek S, Manoharan, Anand, Coupland, Paul, Holden, Matthew TG, Parkhill, Julian, Bentley, Stephen D, Robinson, D Ashley, Tong, Steven YC
Publicado 2015

Contrasting evolutionary genome dynamics between domesticated and wild yeasts

por Yue, Jia-Xing, Li, Jing, Aigrain, Louise, Hallin, Johan, Persson, Karl, Oliver, Karen, Bergström, Anders, Coupland, Paul, Warringer, Jonas, Lagomarsino, Marco Consentino, Fischer, Gilles, Durbin, Richard, Liti, Gianni
Publicado 2017

De novo yeast genome assemblies from MinION, PacBio and MiSeq platforms

por Giordano, Francesca, Aigrain, Louise, Quail, Michael A, Coupland, Paul, Bonfield, James K, Davies, Robert M, Tischler, German, Jackson, David K, Keane, Thomas M, Li, Jing, Yue, Jia-Xing, Liti, Gianni, Durbin, Richard, Ning, Zemin
Publicado 2017

Complete Genome Sequence of MIDG2331, a Genetically Tractable Serovar 8 Clinical Isolate of Actinobacillus pleuropneumoniae

por Bossé, Janine T., Chaudhuri, Roy R., Li, Yanwen, Leanse, Leon G., Fernandez Crespo, Roberto, Coupland, Paul, Holden, Matthew T. G., Bazzolli, Denise M., Maskell, Duncan J., Tucker, Alexander W., Wren, Brendan W., Rycroft, Andrew N., Langford, Paul R.
Publicado 2016

Resolving the immune landscape of human prostate at a single-cell level in health and cancer

por Tuong, Zewen Kelvin, Loudon, Kevin W., Berry, Brendan, Richoz, Nathan, Jones, Julia, Tan, Xiao, Nguyen, Quan, George, Anne, Hori, Satoshi, Field, Sarah, Lynch, Andy G., Kania, Katarzyna, Coupland, Paul, Babbage, Anne, Grenfell, Richard, Barrett, Tristan, Warren, Anne Y., Gnanapragasam, Vincent, Massie, Charlie, Clatworthy, Menna R.
Publicado 2021

Single-cell multi-omics analysis of the immune response in COVID-19

por Stephenson, Emily, Reynolds, Gary, Botting, Rachel A., Calero-Nieto, Fernando J., Morgan, Michael D., Tuong, Zewen Kelvin, Bach, Karsten, Sungnak, Waradon, Worlock, Kaylee B., Yoshida, Masahiro, Kumasaka, Natsuhiko, Kania, Katarzyna, Engelbert, Justin, Olabi, Bayanne, Spegarova, Jarmila Stremenova, Wilson, Nicola K., Mende, Nicole, Jardine, Laura, Gardner, Louis C. S., Goh, Issac, Horsfall, Dave, McGrath, Jim, Webb, Simone, Mather, Michael W., Lindeboom, Rik G. H., Dann, Emma, Huang, Ni, Polanski, Krzysztof, Prigmore, Elena, Gothe, Florian, Scott, Jonathan, Payne, Rebecca P., Baker, Kenneth F., Hanrath, Aidan T., Schim van der Loeff, Ina C. D., Barr, Andrew S., Sanchez-Gonzalez, Amada, Bergamaschi, Laura, Mescia, Federica, Barnes, Josephine L., Kilich, Eliz, de Wilton, Angus, Saigal, Anita, Saleh, Aarash, Janes, Sam M., Smith, Claire M., Gopee, Nusayhah, Wilson, Caroline, Coupland, Paul, Coxhead, Jonathan M., Kiselev, Vladimir Yu, van Dongen, Stijn, Bacardit, Jaume, King, Hamish W., Rostron, Anthony J., Simpson, A. John, Hambleton, Sophie, Laurenti, Elisa, Lyons, Paul A., Meyer, Kerstin B., Nikolić, Marko Z., Duncan, Christopher J. A., Smith, Kenneth G. C., Teichmann, Sarah A., Clatworthy, Menna R., Marioni, John C., Göttgens, Berthold, Haniffa, Muzlifah
Publicado 2021