Thousands of Novel Endolysins Discovered in Uncultured Phage Genomes

por Fernández-Ruiz, Iris, Coutinho, Felipe H., Rodriguez-Valera, Francisco
Publicado 2018

Prophage Genomics and Ecology in the Family Rhodobacteraceae

por Forcone, Kathryn, Coutinho, Felipe H., Cavalcanti, Giselle S., Silveira, Cynthia B.
Publicado 2021

Viruses and Their Interactions With Bacteria and Archaea of Hypersaline Great Salt Lake

por Bhattarai, Bishav, Bhattacharjee, Ananda S., Coutinho, Felipe H., Goel, Ramesh K.
Publicado 2021

Robust taxonomic classification of uncharted microbial sequences and bins with CAT and BAT

por von Meijenfeldt, F. A. Bastiaan, Arkhipova, Ksenia, Cambuy, Diego D., Coutinho, Felipe H., Dutilh, Bas E.
Publicado 2019

Insights of Phage-Host Interaction in Hypersaline Ecosystem through Metagenomics Analyses

por Motlagh, Amir Mohaghegh, Bhattacharjee, Ananda S., Coutinho, Felipe H., Dutilh, Bas E., Casjens, Sherwood R., Goel, Ramesh K.
Publicado 2017

Ecogenomics and Taxonomy of Cyanobacteria Phylum

por Walter, Juline M., Coutinho, Felipe H., Dutilh, Bas E., Swings, Jean, Thompson, Fabiano L., Thompson, Cristiane C.
Publicado 2017

iPHoP: An integrated machine learning framework to maximize host prediction for metagenome-derived viruses of archaea and bacteria

por Roux, Simon, Camargo, Antonio Pedro, Coutinho, Felipe H., Dabdoub, Shareef M., Dutilh, Bas E., Nayfach, Stephen, Tritt, Andrew
Publicado 2023

Spatial and Temporal Dynamics of Prokaryotic and Viral Community Assemblages in a Lotic System (Manatee Springs, Florida)

por Malki, Kema, Sawaya, Natalie A., Tisza, Michael J., Coutinho, Felipe H., Rosario, Karyna, Székely, Anna J., Breitbart, Mya
Publicado 2021

Niche distribution and influence of environmental parameters in marine microbial communities: a systematic review

por Coutinho, Felipe H., Meirelles, Pedro M., Moreira, Ana Paula B., Paranhos, Rodolfo P., Dutilh, Bas E., Thompson, Fabiano L.
Publicado 2015

Putative mobilized colistin resistance genes in the human gut microbiome

por Andrade, Bruno G. N., Goris, Tobias, Afli, Haithem, Coutinho, Felipe H., Dávila, Alberto M. R., Cuadrat, Rafael R. C.
Publicado 2021

Water mass age structures the auxiliary metabolic gene content of free-living and particle-attached deep ocean viral communities

por Coutinho, Felipe H., Silveira, Cynthia B., Sebastián, Marta, Sánchez, Pablo, Duarte, Carlos M., Vaqué, Dolors, Gasol, Josep M., Acinas, Silvia G.
Publicado 2023

Metatranscriptome Profiling of a Specialized Microbial Consortium during the Degradation of Nixtamalized Maize Pericarp

por Serrano-Gamboa, José Germán, Fócil-Espinosa, Carlos Abraham, Cabello-Yeves, Pedro J., Coutinho, Felipe H., Rojas-Herrera, Rafael Antonio, Sánchez-González, Mónica Noel
Publicado 2022

Marine viruses discovered via metagenomics shed light on viral strategies throughout the oceans

por Coutinho, Felipe H., Silveira, Cynthia B., Gregoracci, Gustavo B., Thompson, Cristiane C., Edwards, Robert A., Brussaard, Corina P. D., Dutilh, Bas E., Thompson, Fabiano L.
Publicado 2017

Tropical Aquatic Archaea Show Environment-Specific Community Composition

por Silveira, Cynthia B., Cardoso, Alexander M., Coutinho, Felipe H., Lima, Joyce L., Pinto, Leonardo H., Albano, Rodolpho M., Clementino, Maysa M., Martins, Orlando B., Vieira, Ricardo P.
Publicado 2013

Pollution Impacts on Bacterioplankton Diversity in a Tropical Urban Coastal Lagoon System

por Salloto, Gigliola R. B., Cardoso, Alexander M., Coutinho, Felipe H., Pinto, Leonardo H., Vieira, Ricardo P., Chaia, Catia, Lima, Joyce L., Albano, Rodolpho M., Martins, Orlando B., Clementino, Maysa M.
Publicado 2012

Genomic and ecological attributes of marine bacteriophages encoding bacterial virulence genes

por Silveira, Cynthia B., Coutinho, Felipe H., Cavalcanti, Giselle S., Benler, Sean, Doane, Michael P., Dinsdale, Elizabeth A., Edwards, Robert A., Francini-Filho, Ronaldo B., Thompson, Cristiane C., Luque, Antoni, Rohwer, Forest L., Thompson, Fabiano
Publicado 2020

Bacterial Community Associated with the Reef Coral Mussismilia braziliensis's Momentum Boundary Layer over a Diel Cycle

por Silveira, Cynthia B., Gregoracci, Gustavo B., Coutinho, Felipe H., Silva, Genivaldo G. Z., Haggerty, John M., de Oliveira, Louisi S., Cabral, Anderson S., Rezende, Carlos E., Thompson, Cristiane C., Francini-Filho, Ronaldo B., Edwards, Robert A., Dinsdale, Elizabeth A., Thompson, Fabiano L.
Publicado 2017

Nasopharyngeal Microbial Communities of Patients Infected With SARS-CoV-2 That Developed COVID-19

por Ventero, Maria Paz, Cuadrat, Rafael R. C., Vidal, Inmaculada, Andrade, Bruno G. N., Molina-Pardines, Carmen, Haro-Moreno, Jose M., Coutinho, Felipe H., Merino, Esperanza, Regitano, Luciana C. A., Silveira, Cynthia B., Afli, Haithem, López-Pérez, Mario, Rodríguez, Juan Carlos
Publicado 2021

Virioplankton Assemblage Structure in the Lower River and Ocean Continuum of the Amazon

por Silva, Bruno S. de O., Coutinho, Felipe H., Gregoracci, Gustavo B., Leomil, Luciana, de Oliveira, Louisi S., Fróes, Adriana, Tschoeke, Diogo, Soares, Ana Carolina, Cabral, Anderson S., Ward, Nicholas D., Richey, Jeffrey E., Krusche, Alex V., Yager, Patricia L., de Rezende, Carlos Eduardo, Thompson, Cristiane C., Thompson, Fabiano L.
Publicado 2017

Integrating Computational Methods to Investigate the Macroecology of Microbiomes

por Mascarenhas, Rilquer, Ruziska, Flávia M., Moreira, Eduardo Freitas, Campos, Amanda B., Loiola, Miguel, Reis, Kaike, Trindade-Silva, Amaro E., Barbosa, Felipe A. S., Salles, Lucas, Menezes, Rafael, Veiga, Rafael, Coutinho, Felipe H., Dutilh, Bas E., Guimarães, Paulo R., Assis, Ana Paula A., Ara, Anderson, Miranda, José G. V., Andrade, Roberto F. S., Vilela, Bruno, Meirelles, Pedro Milet
Publicado 2020