From Pine Cones to Read Clouds: Rescaffolding the Megagenome of Sugar Pine (Pinus lambertiana)

por Crepeau, Marc W., Langley, Charles H., Stevens, Kristian A.
Publicado 2017

The Drosophila Genome Nexus: A Population Genomic Resource of 623 Drosophila melanogaster Genomes, Including 197 from a Single Ancestral Range Population

por Lack, Justin B., Cardeno, Charis M., Crepeau, Marc W., Taylor, William, Corbett-Detig, Russell B., Stevens, Kristian A., Langley, Charles H., Pool, John E.
Publicado 2015

An improved assembly of the loblolly pine mega-genome using long-read single-molecule sequencing

por Zimin, Aleksey V., Stevens, Kristian A., Crepeau, Marc W., Puiu, Daniela, Wegrzyn, Jill L., Yorke, James A., Langley, Charles H., Neale, David B., Salzberg, Steven L.
Publicado 2017

Erratum to: An improved assembly of the loblolly pine mega-genome using long-read single-molecule sequencing

por Zimin, Aleksey V., Stevens, Kristian A., Crepeau, Marc W., Puiu, Daniela, Wegrzyn, Jill L., Yorke, James A., Langley, Charles H., Neale, David B., Salzberg, Steven L.
Publicado 2017

Population Genetics of Anopheles pretoriensis in Grande Comore Island

por Campos, Melina, Patel, Nikita, Marshall, Carly, Gripkey, Hans, Ditter, Robert E., Crepeau, Marc W., Toilibou, Ali, Amina, Yssouf, Cornel, Anthony J., Lee, Yoosook, Lanzaro, Gregory C.
Publicado 2022

Anopheles gambiae on remote islands in the Indian Ocean: origins and prospects for malaria elimination by genetic modification of extant populations

por Ditter, Robert E., Campos, Melina, Crepeau, Marc W., Pinto, João, Toilibou, Ali, Amina, Yssouf, Tantely, Luciano Michaël, Girod, Romain, Lee, Yoosook, Cornel, Anthony J., Lanzaro, Gregory C.
Publicado 2023

Dissecting the Polygenic Basis of Cold Adaptation Using Genome-Wide Association of Traits and Environmental Data in Douglas-fir

por De La Torre, Amanda R., Wilhite, Benjamin, Puiu, Daniela, St. Clair, John Bradley, Crepeau, Marc W., Salzberg, Steven L., Langley, Charles H., Allen, Brian, Neale, David B.
Publicado 2021

Population Genomics of Sub-Saharan Drosophila melanogaster: African Diversity and Non-African Admixture

por Pool, John E., Corbett-Detig, Russell B., Sugino, Ryuichi P., Stevens, Kristian A., Cardeno, Charis M., Crepeau, Marc W., Duchen, Pablo, Emerson, J. J., Saelao, Perot, Begun, David J., Langley, Charles H.
Publicado 2012

A new genomic tool for walnut (Juglans regia L.): development and validation of the high‐density Axiom™ J. regia 700K SNP genotyping array

por Marrano, Annarita, Martínez‐García, Pedro J., Bianco, Luca, Sideli, Gina M., Di Pierro, Erica A., Leslie, Charles A., Stevens, Kristian A., Crepeau, Marc W., Troggio, Michela, Langley, Charles H., Neale, David B.
Publicado 2018

Sequencing and Assembly of the 22-Gb Loblolly Pine Genome

por Zimin, Aleksey, Stevens, Kristian A., Crepeau, Marc W., Holtz-Morris, Ann, Koriabine, Maxim, Marçais, Guillaume, Puiu, Daniela, Roberts, Michael, Wegrzyn, Jill L., de Jong, Pieter J., Neale, David B., Salzberg, Steven L., Yorke, James A., Langley, Charles H.
Publicado 2014

Genomic Variation Among and Within Six Juglans Species

por Stevens, Kristian A., Woeste, Keith, Chakraborty, Sandeep, Crepeau, Marc W., Leslie, Charles A., Martínez-García, Pedro J., Puiu, Daniela, Romero-Severson, Jeanne, Coggeshall, Mark, Dandekar, Abhaya M., Kluepfel, Daniel, Neale, David B., Salzberg, Steven L., Langley, Charles H.
Publicado 2018

Development of a highly efficient Axiom™ 70 K SNP array for Pyrus and evaluation for high-density mapping and germplasm characterization

por Montanari, Sara, Bianco, Luca, Allen, Brian J., Martínez-García, Pedro J., Bassil, Nahla V., Postman, Joseph, Knäbel, Mareike, Kitson, Biff, Deng, Cecilia H., Chagné, David, Crepeau, Marc W., Langley, Charles H., Evans, Kate, Dhingra, Amit, Troggio, Michela, Neale, David B.
Publicado 2019

The Douglas-Fir Genome Sequence Reveals Specialization of the Photosynthetic Apparatus in Pinaceae

por Neale, David B., McGuire, Patrick E., Wheeler, Nicholas C., Stevens, Kristian A., Crepeau, Marc W., Cardeno, Charis, Zimin, Aleksey V., Puiu, Daniela, Pertea, Geo M., Sezen, U. Uzay, Casola, Claudio, Koralewski, Tomasz E., Paul, Robin, Gonzalez-Ibeas, Daniel, Zaman, Sumaira, Cronn, Richard, Yandell, Mark, Holt, Carson, Langley, Charles H., Yorke, James A., Salzberg, Steven L., Wegrzyn, Jill L.
Publicado 2017

Unique Features of the Loblolly Pine (Pinus taeda L.) Megagenome Revealed Through Sequence Annotation

por Wegrzyn, Jill L., Liechty, John D., Stevens, Kristian A., Wu, Le-Shin, Loopstra, Carol A., Vasquez-Gross, Hans A., Dougherty, William M., Lin, Brian Y., Zieve, Jacob J., Martínez-García, Pedro J., Holt, Carson, Yandell, Mark, Zimin, Aleksey V., Yorke, James A., Crepeau, Marc W., Puiu, Daniela, Salzberg, Steven L., de Jong, Pieter J., Mockaitis, Keithanne, Main, Doreen, Langley, Charles H., Neale, David B.
Publicado 2014

Decoding the massive genome of loblolly pine using haploid DNA and novel assembly strategies

por Neale, David B, Wegrzyn, Jill L, Stevens, Kristian A, Zimin, Aleksey V, Puiu, Daniela, Crepeau, Marc W, Cardeno, Charis, Koriabine, Maxim, Holtz-Morris, Ann E, Liechty, John D, Martínez-García, Pedro J, Vasquez-Gross, Hans A, Lin, Brian Y, Zieve, Jacob J, Dougherty, William M, Fuentes-Soriano, Sara, Wu, Le-Shin, Gilbert, Don, Marçais, Guillaume, Roberts, Michael, Holt, Carson, Yandell, Mark, Davis, John M, Smith, Katherine E, Dean, Jeffrey FD, Lorenz, W Walter, Whetten, Ross W, Sederoff, Ronald, Wheeler, Nicholas, McGuire, Patrick E, Main, Doreen, Loopstra, Carol A, Mockaitis, Keithanne, deJong, Pieter J, Yorke, James A, Salzberg, Steven L, Langley, Charles H
Publicado 2014