Whole-genome sequencing identifies nosocomial transmission of extra-pulmonary M. tuberculosis

por Walker, T.M., Crook, D.W., Peto, T.E.A., Conlon, C.P.
Publicado 2016

Whole genome sequencing in the prevention and control of Staphylococcus aureus infection

por Price, J.R., Didelot, X., Crook, D.W., Llewelyn, M.J., Paul, J.
Publicado 2013

High-resolution characterization of short-term temporal variability in the taxonomic and resistome composition of wastewater influent

por Chau, Kevin K., Goodall, T., Bowes, M., Easterbrook, K., Brett, H., Hughes, J., Crook, D.W., Read, D.S., Walker, A.S., Stoesser, N.
Publicado 2023

Multiple-Strain Colonization in Nasal Carriers of Staphylococcus aureus

por Votintseva, A. A., Miller, R. R., Fung, R., Knox, K., Godwin, H., Peto, T. E. A., Crook, D. W., Bowden, R., Walker, A. S.
Publicado 2014

Genomic dynamics of species and mobile genetic elements in a prolonged bla(IMP-4)-associated carbapenemase outbreak in an Australian hospital

por Kizny Gordon, A, Phan, H T T, Lipworth, S I, Cheong, E, Gottlieb, T, George, S, Peto, T E A, Mathers, A J, Walker, A S, Crook, D W, Stoesser, N
Publicado 2020

Comparison of Multilocus Variable-Number Tandem-Repeat Analysis and Whole-Genome Sequencing for Investigation of Clostridium difficile Transmission

por Eyre, D. W., Fawley, W. N., Best, E. L., Griffiths, D., Stoesser, N. E., Crook, D. W., Peto, T. E. A., Walker, A. S., Wilcox, M. H.
Publicado 2013

Dynamics of MDR Enterobacter cloacae outbreaks in a neonatal unit in Nepal: insights using wider sampling frames and next-generation sequencing

por Stoesser, N., Sheppard, A. E., Shakya, M., Sthapit, B., Thorson, S., Giess, A., Kelly, D., Pollard, A. J., Peto, T. E. A., Walker, A. S., Crook, D. W.
Publicado 2015

Multi-site and nasal swabbing for carriage of Staphylococcus aureus: what does a single nose swab predict?

por Young, B.C., Votintseva, A.A., Foster, D., Godwin, H., Miller, R.R., Anson, L.W., Walker, A.S., Peto, T.E.A., Crook, D.W., Knox, K.
Publicado 2017

Systematic review of wastewater surveillance of antimicrobial resistance in human populations

por Chau, K.K., Barker, L., Budgell, E.P., Vihta, K.D., Sims, N., Kasprzyk-Hordern, B., Harriss, E., Crook, D.W., Read, D.S., Walker, A.S., Stoesser, N.
Publicado 2022

Predicting antimicrobial susceptibilities for Escherichia coli and Klebsiella pneumoniae isolates using whole genomic sequence data

por Stoesser, N., Batty, E. M., Eyre, D. W., Morgan, M., Wyllie, D. H., Del Ojo Elias, C., Johnson, J. R., Walker, A. S., Peto, T. E. A., Crook, D. W.
Publicado 2013

Risk factors for Klebsiella pneumoniae carbapenemase (KPC) gene acquisition and clinical outcomes across multiple bacterial species

por Mathers, A.J., Vegesana, K., German-Mesner, I., Ainsworth, J., Pannone, A., Crook, D.W., Sifri, C.D., Sheppard, A., Stoesser, N., Peto, T., Walker, A.S., Eyre, D.W.
Publicado 2020

Illumina short-read and MinION long-read WGS to characterize the molecular epidemiology of an NDM-1 Serratia marcescens outbreak in Romania

por Phan, H T T, Stoesser, N, Maciuca, I E, Toma, F, Szekely, E, Flonta, M, Hubbard, A T M, Pankhurst, L, Do, T, Peto, T E A, Walker, A S, Crook, D W, Timofte, D
Publicado 2018

Extensive Within-Host Diversity in Fecally Carried Extended-Spectrum-Beta-Lactamase-Producing Escherichia coli Isolates: Implications for Transmission Analyses

por Stoesser, N., Sheppard, A. E., Moore, C. E., Golubchik, T., Parry, C. M., Nget, P., Saroeun, M., Day, N. P. J., Giess, A., Johnson, J. R., Peto, T. E. A., Crook, D. W., Walker, A. S.
Publicado 2015

Genomic epidemiology of global Klebsiella pneumoniae carbapenemase (KPC)-producing Escherichia coli

por Stoesser, N., Sheppard, A. E., Peirano, G., Anson, L. W., Pankhurst, L., Sebra, R., Phan, H. T. T., Kasarskis, A., Mathers, A. J., Peto, T. E. A., Bradford, P., Motyl, M. R., Walker, A. S., Crook, D. W., Pitout, J. D.
Publicado 2017

Epidemiology of paediatric gastrointestinal colonisation by extended spectrum cephalosporin-resistant Escherichia coli and Klebsiella pneumoniae isolates in north-west Cambodia

por van Aartsen, J. J., Moore, C. E., Parry, C. M., Turner, P., Phot, N., Mao, S., Suy, K., Davies, T., Giess, A., Sheppard, A. E., Peto, T. E. A., Day, N. P. J., Crook, D. W., Walker, A. S., Stoesser, N.
Publicado 2019

Prediction of Staphylococcus aureus Antimicrobial Resistance by Whole-Genome Sequencing

por Gordon, N. C., Price, J. R., Cole, K., Everitt, R., Morgan, M., Finney, J., Kearns, A. M., Pichon, B., Young, B., Wilson, D. J., Llewelyn, M. J., Paul, J., Peto, T. E. A., Crook, D. W., Walker, A. S., Golubchik, T.
Publicado 2014

Healthcare-associated outbreak of meticillin-resistant Staphylococcus aureus bacteraemia: role of a cryptic variant of an epidemic clone()

por Miller, R.R., Price, J.R., Batty, E.M., Didelot, X., Wyllie, D., Golubchik, T., Crook, D.W., Paul, J., Peto, T.E.A., Wilson, D.J., Cule, M., Ip, C.L.C., Day, N.P.J., Moore, C.E., Bowden, R., Llewelyn, M.J.
Publicado 2014

Genome Sequencing of an Extended Series of NDM-Producing Klebsiella pneumoniae Isolates from Neonatal Infections in a Nepali Hospital Characterizes the Extent of Community- versus...

por Stoesser, N., Giess, A., Batty, E. M., Sheppard, A. E., Walker, A. S., Wilson, D. J., Didelot, X., Bashir, A., Sebra, R., Kasarskis, A., Sthapit, B., Shakya, M., Kelly, D., Pollard, A. J., Peto, T. E. A., Crook, D. W., Donnelly, P., Thorson, S., Amatya, P., Joshi, S.
Publicado 2014

Whole-Genome Sequencing Reveals the Contribution of Long-Term Carriers in Staphylococcus aureus Outbreak Investigation

por Gordon, N. C., Pichon, B., Golubchik, T., Wilson, D. J., Paul, J., Blanc, D. S., Cole, K., Collins, J., Cortes, N., Cubbon, M., Gould, F. K., Jenks, P. J., Llewelyn, M., Nash, J. Q., Orendi, J. M., Paranthaman, K., Price, J. R., Senn, L., Thomas, H. L., Wyllie, S., Crook, D. W., Peto, T. E. A., Walker, A. S., Kearns, A. M.
Publicado 2017