PMAnalyzer: a new web interface for bacterial growth curve analysis

por Cuevas, Daniel A, Edwards, Robert A
Publicado 2017

Growth Score: a single metric to define growth in 96-well phenotype assays

por Cuevas, Daniel A., Edwards, Robert A.
Publicado 2018

Towards Predicting Gut Microbial Metabolism: Integration of Flux Balance Analysis and Untargeted Metabolomics

por Kuang, Ellen, Marney, Matthew, Cuevas, Daniel, Edwards, Robert A., Forsberg, Erica M.
Publicado 2020

FOCUS: an alignment-free model to identify organisms in metagenomes using non-negative least squares

por Silva, Genivaldo Gueiros Z., Cuevas, Daniel A., Dutilh, Bas E., Edwards, Robert A.
Publicado 2014

From DNA to FBA: How to Build Your Own Genome-Scale Metabolic Model

por Cuevas, Daniel A., Edirisinghe, Janaka, Henry, Chris S., Overbeek, Ross, O’Connell, Taylor G., Edwards, Robert A.
Publicado 2016

Accessing the SEED Genome Databases via Web Services API: Tools for Programmers

por Disz, Terry, Akhter, Sajia, Cuevas, Daniel, Olson, Robert, Overbeek, Ross, Vonstein, Veronika, Stevens, Rick, Edwards, Robert A
Publicado 2010

Dietary prophage inducers and antimicrobials: toward landscaping the human gut microbiome

por Boling, Lance, Cuevas, Daniel A., Grasis, Juris A., Kang, Han Suh, Knowles, Ben, Levi, Kyle, Maughan, Heather, McNair, Katelyn, Rojas, Maria Isabel, Sanchez, Savannah E., Smurthwaite, Cameron, Rohwer, Forest
Publicado 2020

Cystic Fibrosis Rapid Response: Translating Multi-omics Data into Clinically Relevant Information

por Cobián Güemes, Ana Georgina, Lim, Yan Wei, Quinn, Robert A., Conrad, Douglas J., Benler, Sean, Maughan, Heather, Edwards, Rob, Brettin, Thomas, Cantú, Vito Adrian, Cuevas, Daniel, Hamidi, Rohaum, Dorrestein, Pieter, Rohwer, Forest
Publicado 2019

Phage Phenomics: Physiological Approaches to Characterize Novel Viral Proteins

por Sanchez, Savannah E., Cuevas, Daniel A., Rostron, Jason E., Liang, Tiffany Y., Pivaroff, Cullen G., Haynes, Matthew R., Nulton, Jim, Felts, Ben, Bailey, Barbara A., Salamon, Peter, Edwards, Robert A., Burgin, Alex B., Segall, Anca M., Rohwer, Forest
Publicado 2015

Comparative genomics of 274 Vibrio cholerae genomes reveals mobile functions structuring three niche dimensions

por Dutilh, Bas E, Thompson, Cristiane C, Vicente, Ana CP, Marin, Michel A, Lee, Clarence, Silva, Genivaldo GZ, Schmieder, Robert, Andrade, Bruno GN, Chimetto, Luciane, Cuevas, Daniel, Garza, Daniel R, Okeke, Iruka N, Aboderin, Aaron Oladipo, Spangler, Jessica, Ross, Tristen, Dinsdale, Elizabeth A, Thompson, Fabiano L, Harkins, Timothy T, Edwards, Robert A
Publicado 2014

Sequencing at sea: challenges and experiences in Ion Torrent PGM sequencing during the 2013 Southern Line Islands Research Expedition

por Lim, Yan Wei, Cuevas, Daniel A., Silva, Genivaldo Gueiros Z., Aguinaldo, Kristen, Dinsdale, Elizabeth A., Haas, Andreas F., Hatay, Mark, Sanchez, Savannah E., Wegley-Kelly, Linda, Dutilh, Bas E., Harkins, Timothy T., Lee, Clarence C., Tom, Warren, Sandin, Stuart A., Smith, Jennifer E., Zgliczynski, Brian, Vermeij, Mark J.A., Rohwer, Forest, Edwards, Robert A.
Publicado 2014