Single-cell genomics in plants: current state, future directions, and hurdles to overcome

por Cuperus, Josh T
Publicado 2021

Effects of sequence motifs in the yeast 3′ untranslated region determined from massively parallel assays of random sequences

por Savinov, Andrew, Brandsen, Benjamin M., Angell, Brooke E., Cuperus, Josh T., Fields, Stanley
Publicado 2021

LTP2 hypomorphs show genotype-by-environment interaction in early seedling traits in Arabidopsis thaliana

por Alexandre, Cristina M, Bubb, Kerry L, Schultz, Karla M, Lempe, Janne, Cuperus, Josh T, Queitsch, Christine
Publicado 2023

Deep learning of the regulatory grammar of yeast 5′ untranslated regions from 500,000 random sequences

por Cuperus, Josh T., Groves, Benjamin, Kuchina, Anna, Rosenberg, Alexander B., Jojic, Nebojsa, Fields, Stanley, Seelig, Georg
Publicado 2017

The regulatory landscape of Arabidopsis thaliana roots at single-cell resolution

por Dorrity, Michael W., Alexandre, Cristina M., Hamm, Morgan O., Vigil, Anna-Lena, Fields, Stanley, Queitsch, Christine, Cuperus, Josh T.
Publicado 2021

Features that Govern Terminator Strength in Plants

por Gorjifard, Sayeh, Jores, Tobias, Tonnies, Jackson, Mueth, Nicholas A, Bubb, Kerry, Wrightsman, Travis, Buckler, Edward S, Fields, Stanley, Cuperus, Josh T, Queitsch, Christine
Publicado 2023

De novo designed Hsp70 activator dissolves intracellular condensates

por Zhang, Jason Z, Greenwood, Nathan, Hernandez, Jason, Cuperus, Josh T, Huang, Buwei, Ryder, Bryan D, Queitsch, Christine, Gestwicki, Jason E, Baker, David
Publicado 2023

Unique Functionality of 22 nt miRNAs in Triggering RDR6-Dependent siRNA Biogenesis from Target Transcripts in Arabidopsis

por Cuperus, Josh T., Carbonell, Alberto, Fahlgren, Noah, Garcia-Ruiz, Hernan, Burke, Russell T., Takeda, Atsushi, Sullivan, Christopher M., Gilbert, Sunny D., Montgomery, Taiowa A., Carrington, James C.
Publicado 2010

Dynamics of Gene Expression in Single Root Cells of Arabidopsis thaliana

por Jean-Baptiste, Ken, McFaline-Figueroa, José L., Alexandre, Cristina M., Dorrity, Michael W., Saunders, Lauren, Bubb, Kerry L., Trapnell, Cole, Fields, Stanley, Queitsch, Christine, Cuperus, Josh T.
Publicado 2019

Phytophthora Have Distinct Endogenous Small RNA Populations That Include Short Interfering and microRNAs

por Fahlgren, Noah, Bollmann, Stephanie R., Kasschau, Kristin D., Cuperus, Josh T., Press, Caroline M., Sullivan, Christopher M., Chapman, Elisabeth J., Hoyer, J. Steen, Gilbert, Kerrigan B., Grünwald, Niklaus J., Carrington, James C.
Publicado 2013

Ribosomal DNA replication time coordinates completion of genome replication and anaphase in yeast

por Kwan, Elizabeth X., Alvino, Gina M., Lynch, Kelsey L., Levan, Paula F., Amemiya, Haley M., Wang, Xiaobin S., Johnson, Sarah A., Sanchez, Joseph C., Miller, Madison A., Croy, Mackenzie, Lee, Seung-been, Naushab, Maria, Bedalov, Antonio, Cuperus, Josh T., Brewer, Bonita J., Queitsch, Christine, Raghuraman, M.K.
Publicado 2023