The hidden universal distribution of amino acid biosynthetic networks: a genomic perspective on their origins and evolution

por Hernández-Montes, Georgina, Díaz-Mejía, J Javier, Pérez-Rueda, Ernesto, Segovia, Lorenzo
Publicado 2008

scNetViz: from single cells to networks using Cytoscape

por Choudhary, Krishna, Meng, Elaine C., Diaz-Mejia, J. Javier, Bader, Gary D., Pico, Alexander R., Morris, John H.
Publicado 2021

Evaluation of methods to assign cell type labels to cell clusters from single-cell RNA-sequencing data

por Diaz-Mejia, J. Javier, Meng, Elaine C., Pico, Alexander R., MacParland, Sonya A., Ketela, Troy, Pugh, Trevor J., Bader, Gary D., Morris, John H.
Publicado 2019

The Escherichia coli Phosphotyrosine Proteome Relates to Core Pathways and Virulence

por Hansen, Anne-Marie, Chaerkady, Raghothama, Sharma, Jyoti, Díaz-Mejía, J. Javier, Tyagi, Nidhi, Renuse, Santosh, Jacob, Harrys K. C., Pinto, Sneha M., Sahasrabuddhe, Nandini A., Kim, Min-Sik, Delanghe, Bernard, Srinivasan, Narayanaswamy, Emili, Andrew, Kaper, James B., Pandey, Akhilesh
Publicado 2013

CReSCENT: CanceR Single Cell ExpressioN Toolkit

por Mohanraj, Suluxan, Díaz-Mejía, J Javier, Pham, Martin D, Elrick, Hillary, Husić, Mia, Rashid, Shaikh, Luo, Ping, Bal, Prabnur, Lu, Kevin, Patel, Samarth, Mahalanabis, Alaina, Naidas, Alaine, Christensen, Erik, Croucher, Danielle, Richards, Laura M, Shooshtari, Parisa, Brudno, Michael, Ramani, Arun K, Pugh, Trevor J
Publicado 2020

Mapping DNA damage‐dependent genetic interactions in yeast via party mating and barcode fusion genetics

por Díaz‐Mejía, J Javier, Celaj, Albi, Mellor, Joseph C, Coté, Atina, Balint, Attila, Ho, Brandon, Bansal, Pritpal, Shaeri, Fatemeh, Gebbia, Marinella, Weile, Jochen, Verby, Marta, Karkhanina, Anna, Zhang, YiFan, Wong, Cassandra, Rich, Justin, Prendergast, D'Arcy, Gupta, Gaurav, Öztürk, Sedide, Durocher, Daniel, Brown, Grant W, Roth, Frederick P
Publicado 2018

Global Functional Atlas of Escherichia coli Encompassing Previously Uncharacterized Proteins

por Hu, Pingzhao, Janga, Sarath Chandra, Babu, Mohan, Díaz-Mejía, J. Javier, Butland, Gareth, Yang, Wenhong, Pogoutse, Oxana, Guo, Xinghua, Phanse, Sadhna, Wong, Peter, Chandran, Shamanta, Christopoulos, Constantine, Nazarians-Armavil, Anaies, Nasseri, Negin Karimi, Musso, Gabriel, Ali, Mehrab, Nazemof, Nazila, Eroukova, Veronika, Golshani, Ashkan, Paccanaro, Alberto, Greenblatt, Jack F, Moreno-Hagelsieb, Gabriel, Emili, Andrew
Publicado 2009

Genetic Interaction Maps in Escherichia coli Reveal Functional Crosstalk among Cell Envelope Biogenesis Pathways

por Babu, Mohan, Díaz-Mejía, J. Javier, Vlasblom, James, Gagarinova, Alla, Phanse, Sadhna, Graham, Chris, Yousif, Fouad, Ding, Huiming, Xiong, Xuejian, Nazarians-Armavil, Anaies, Alamgir, Md, Ali, Mehrab, Pogoutse, Oxana, Pe'er, Asaf, Arnold, Roland, Michaut, Magali, Parkinson, John, Golshani, Ashkan, Whitfield, Chris, Wodak, Shoshana J., Moreno-Hagelsieb, Gabriel, Greenblatt, Jack F., Emili, Andrew
Publicado 2011

Immunophenotypic correlates of sustained MRD negativity in patients with multiple myeloma

por Coffey, David G., Maura, Francesco, Gonzalez-Kozlova, Edgar, Diaz-Mejia, J. Javier, Luo, Ping, Zhang, Yong, Xu, Yuexin, Warren, Edus H., Dawson, Travis, Lee, Brian, Xie, Hui, Smith, Eric, Ciardiello, Amanda, Cho, Hearn J., Rahman, Adeeb, Kim-Schulze, Seunghee, Diamond, Benjamin, Lesokhin, Alexander, Kazandjian, Dickran, Pugh, Trevor J., Green, Damian J., Gnjatic, Sacha, Landgren, Ola
Publicado 2023

Antitumor immune effects of preoperative sitravatinib and nivolumab in oral cavity cancer: SNOW window-of-opportunity study

por Oliva, Marc, Chepeha, Douglas, Araujo, Daniel V, Diaz-Mejia, J. Javier, Olson, Peter, Prawira, Amy, Spreafico, Anna, Bratman, Scott V, Shek, Tina, de Almeida, John, R Hansen, Aaron, Hope, Andrew, Goldstein, David, Weinreb, Ilan, Smith, Stephen, Perez-Ordoñez, Bayardo, Irish, Jonathan, Torti, Dax, Bruce, Jeffrey P., Wang, Ben X., Fortuna, Anthony, Pugh, Trevor J., Der-Torossian, Hirak, Shazer, Ronald, Attanasio, Nickolas, Au, Qingyan, Tin, Antony, Feeney, Jordan, Sethi, Himanshu, Aleshin, Alexey, Chen, Isan, Siu, Lillian
Publicado 2021