Integrating microRNA target predictions for the discovery of gene regulatory networks: a semi-supervised ensemble learning approach

por Pio, Gianvito, Malerba, Donato, D'Elia, Domenica, Ceci, Michelangelo
Publicado 2014

ComiRNet: a web-based system for the analysis of miRNA-gene regulatory networks

por Pio, Gianvito, Ceci, Michelangelo, Malerba, Donato, D'Elia, Domenica
Publicado 2015

The joint NETTAB/Integrative Bioinformatics 2015 Meeting: aims, topics and outcomes

por Romano, Paolo, Hofestädt, Ralf, Lange, Matthias, D’Elia, Domenica
Publicado 2017

Comparison of the oxidative phosphorylation (OXPHOS) nuclear genes in the genomes of Drosophila melanogaster, Drosophila pseudoobscura and Anopheles gambiae

por Tripoli, Gaetano, D'Elia, Domenica, Barsanti, Paolo, Caggese, Corrado
Publicado 2005

Prediction of new associations between ncRNAs and diseases exploiting multi-type hierarchical clustering

por Barracchia, Emanuele Pio, Pio, Gianvito, D’Elia, Domenica, Ceci, Michelangelo
Publicado 2020

A Novel Biclustering Algorithm for the Discovery of Meaningful Biological Correlations between microRNAs and their Target Genes

por Pio, Gianvito, Ceci, Michelangelo, D'Elia, Domenica, Loglisci, Corrado, Malerba, Donato
Publicado 2013

Ten simple rules on how to develop a stakeholder engagement plan

por Hollmann, Susanne, Regierer, Babette, Bechis, Jaele, Tobin, Lesley, D’Elia, Domenica
Publicado 2022

MitoRes: a resource of nuclear-encoded mitochondrial genes and their products in Metazoa

por Catalano, Domenico, Licciulli, Flavio, Turi, Antonio, Grillo, Giorgio, Saccone, Cecilia, D'Elia, Domenica
Publicado 2006

Computational annotation of UTR cis-regulatory modules through Frequent Pattern Mining

por Turi, Antonio, Loglisci, Corrado, Salvemini, Eliana, Grillo, Giorgio, Malerba, Donato, D'Elia, Domenica
Publicado 2009

Ten simple rules on how to write a standard operating procedure

por Hollmann, Susanne, Frohme, Marcus, Endrullat, Christoph, Kremer, Andreas, D’Elia, Domenica, Regierer, Babette, Nechyporenko, Alina
Publicado 2020

NOTCH3 and CADASIL syndrome: a genetic and structural overview

por Papakonstantinou, Eleni, Bacopoulou, Flora, Brouzas, Dimitrios, Megalooikonomou, Vasileios, D’Elia, Domenica, Bongcam-Rudloff, Erik, Vlachakis, Dimitrios
Publicado 2019

The 20(th )anniversary of EMBnet: 20 years of bioinformatics for the Life Sciences community

por D'Elia, Domenica, Gisel, Andreas, Eriksson, Nils-Einar, Kossida, Sophia, Mattila, Kimmo, Klucar, Lubos, Bongcam-Rudloff, Erik
Publicado 2009

Arena-Idb: a platform to build human non-coding RNA interaction networks

por Bonnici, Vincenzo, Caro, Giorgio De, Constantino, Giorgio, Liuni, Sabino, D’Elia, Domenica, Bombieri, Nicola, Licciulli, Flavio, Giugno, Rosalba
Publicado 2018

Plant miRNAs Reduce Cancer Cell Proliferation by Targeting MALAT1 and NEAT1: A Beneficial Cross-Kingdom Interaction

por Marzano, Flaviana, Caratozzolo, Mariano Francesco, Consiglio, Arianna, Licciulli, Flavio, Liuni, Sabino, Sbisà, Elisabetta, D’Elia, Domenica, Tullo, Apollonia, Catalano, Domenico
Publicado 2020

Overview of data preprocessing for machine learning applications in human microbiome research

por Ibrahimi, Eliana, Lopes, Marta B., Dhamo, Xhilda, Simeon, Andrea, Shigdel, Rajesh, Hron, Karel, Stres, Blaž, D’Elia, Domenica, Berland, Magali, Marcos-Zambrano, Laura Judith
Publicado 2023

Microarray data and pathway analyses of peripheral blood mononuclear cells from healthy subjects after a three weeks grape-rich diet

por Milella, Rosa Anna, Gasparro, Marica, Alagna, Fiammetta, Cardone, Maria Francesca, Rotunno, Silvia, Ammollo, Concetta Tiziana, Semeraro, Fabrizio, Tullo, Apollonia, Marzano, Flaviana, Catalano, Domenico, Antonacci, Donato, Colucci, Mario, D'Elia, Domenica
Publicado 2020

The need for standardisation in life science research - an approach to excellence and trust.

por Hollmann, Susanne, Kremer, Andreas, Baebler, Špela, Trefois, Christophe, Gruden, Kristina, Rudnicki, Witold R., Tong, Weida, Gruca, Aleksandra, Bongcam-Rudloff, Erik, Evelo, Chris T., Nechyporenko, Alina, Frohme, Marcus, Šafránek, David, Regierer, Babette, D'Elia, Domenica
Publicado 2021

Whole-Exome and Transcriptome Sequencing Expands the Genotype of Majewski Osteodysplastic Primordial Dwarfism Type II

por Marzano, Flaviana, Chiara, Matteo, Consiglio, Arianna, D’Amato, Gabriele, Gentile, Mattia, Mirabelli, Valentina, Piane, Maria, Savio, Camilla, Fabiani, Marco, D’Elia, Domenica, Sbisà, Elisabetta, Scarano, Gioacchino, Lonardo, Fortunato, Tullo, Apollonia, Pesole, Graziano, Faienza, Maria Felicia
Publicado 2023

A platform independent RNA-Seq protocol for the detection of transcriptome complexity

por Calabrese, Claudia, Mangiulli, Marina, Manzari, Caterina, Paluscio, Anna Maria, Caratozzolo, Mariano Francesco, Marzano, Flaviana, Kurelac, Ivana, D’Erchia, Anna Maria, D’Elia, Domenica, Licciulli, Flavio, Liuni, Sabino, Picardi, Ernesto, Attimonelli, Marcella, Gasparre, Giuseppe, Porcelli, Anna Maria, Pesole, Graziano, Sbisà, Elisabetta, Tullo, Apollonia
Publicado 2013

Statistical and Machine Learning Techniques in Human Microbiome Studies: Contemporary Challenges and Solutions

por Moreno-Indias, Isabel, Lahti, Leo, Nedyalkova, Miroslava, Elbere, Ilze, Roshchupkin, Gennady, Adilovic, Muhamed, Aydemir, Onder, Bakir-Gungor, Burcu, Santa Pau, Enrique Carrillo-de, D’Elia, Domenica, Desai, Mahesh S., Falquet, Laurent, Gundogdu, Aycan, Hron, Karel, Klammsteiner, Thomas, Lopes, Marta B., Marcos-Zambrano, Laura Judith, Marques, Cláudia, Mason, Michael, May, Patrick, Pašić, Lejla, Pio, Gianvito, Pongor, Sándor, Promponas, Vasilis J., Przymus, Piotr, Saez-Rodriguez, Julio, Sampri, Alexia, Shigdel, Rajesh, Stres, Blaz, Suharoschi, Ramona, Truu, Jaak, Truică, Ciprian-Octavian, Vilne, Baiba, Vlachakis, Dimitrios, Yilmaz, Ercument, Zeller, Georg, Zomer, Aldert L., Gómez-Cabrero, David, Claesson, Marcus J.
Publicado 2021