Spatially resolved in silico modeling of NKG2D signaling kinetics suggests a key role of NKG2D and Vav1 Co-clustering in generating natural killer cell activation

por Grewal, Rajdeep Kaur, Das, Jayajit
Publicado 2022

McSNAC: A software to approximate first-order signaling networks from mass cytometry data

por Wethington, Darren, Mukherjee, Sayak, Das, Jayajit
Publicado 2023

PASCAR: a multiscale framework to explore the design space of constitutive and inducible CAR T cells

por Rajakaruna, Harshana, Desai, Milie, Das, Jayajit
Publicado 2023

Maximum Entropy Estimation of Probability Distribution of Variables in Higher Dimensions from Lower Dimensional Data

por Das, Jayajit, Mukherjee, Sayak, Hodge, Susan E.
Publicado 2015

Determining clinically relevant features in cytometry data using persistent homology

por Mukherjee, Soham, Wethington, Darren, Dey, Tamal K., Das, Jayajit
Publicado 2022

BioNetGMMFit: estimating parameters of a BioNetGen model from time-stamped snapshots of single cells

por Wu, John, Stewart, William C. L., Jayaprakash, Ciriyam, Das, Jayajit
Publicado 2023

Connecting the dots across time: reconstruction of single-cell signalling trajectories using time-stamped data

por Mukherjee, Sayak, Stewart, David, Stewart, William, Lanier, Lewis L., Das, Jayajit
Publicado 2017

Spatial Clustering of Receptors and Signaling Molecules Regulates NK Cell Response to Peptide Repertoire Changes

por Mbiribindi, Berenice, Mukherjee, Sayak, Wellington, Dannielle, Das, Jayajit, Khakoo, Salim I.
Publicado 2019

Corrigendum: Spatial Clustering of Receptors and Signaling Molecules Regulates NK Cell Response to Peptide Repertoire Changes

por Mbiribindi, Berenice, Mukherjee, Sayak, Wellington, Dannielle, Das, Jayajit, Khakoo, Salim I.
Publicado 2019

Mutations in bacterial genes induce unanticipated changes in the relationship between bacterial pathogens in experimental otitis media

por Lakhani, Vinal, Tan, Li, Mukherjee, Sayak, Stewart, William C. L., Swords, W. Edward, Das, Jayajit
Publicado 2018

Extracellular DNA and Type IV Pilus Expression Regulate the Structure and Kinetics of Biofilm Formation by Nontypeable Haemophilus influenzae

por Das, Jayajit, Mokrzan, Elaine, Lakhani, Vinal, Rosas, Lucia, Jurcisek, Joseph A., Ray, William C., Bakaletz, Lauren O.
Publicado 2017

DEFINING PHARYNGEAL CONTRACTILE INTEGRAL DURING HIGH RESOLUTION MANOMETRY IN NEONATES: A NEUROMOTOR MARKER OF PHARYNGEAL VIGOR

por Jadcherla, Sudarshan R., Prabhakar, Varsha, Hasenstab, Kathryn A., Nawaz, Saira, Das, Jayajit, Kern, Mark, Balasubramanian, Gokulakrishnan, Shaker, Reza
Publicado 2018

In Silico Modeling of Biofilm Formation by Nontypeable Haemophilus influenzae In Vivo

por Brown, Jonathan R., Jurcisek, Joseph, Lakhani, Vinal, Snedden, Ali, Ray, William C., Mokrzan, Elaine M., Bakaletz, Lauren O., Das, Jayajit
Publicado 2019

Non-canonical antagonism of PI3K by the kinase Itpkb delays thymocyte β-selection and renders it Notch-dependent

por Westernberg, Luise, Conche, Claire, Huang, Yina Hsing, Rigaud, Stephanie, Deng, Yisong, Siegemund, Sabine, Mukherjee, Sayak, Nosaka, Lyn'Al, Das, Jayajit, Sauer, Karsten
Publicado 2016

In Silico Modeling of Itk Activation Kinetics in Thymocytes Suggests Competing Positive and Negative IP(4) Mediated Feedbacks Increase Robustness

por Mukherjee, Sayak, Rigaud, Stephanie, Seok, Sang-Cheol, Fu, Guo, Prochenka, Agnieszka, Dworkin, Michael, Gascoigne, Nicholas R. J., Vieland, Veronica J., Sauer, Karsten, Das, Jayajit
Publicado 2013

Correction: In Silico Modeling of Itk Activation Kinetics in Thymocytes Suggests Competing Positive and Negative IP(4) Mediated Feedbacks Increase Robustness

por Mukherjee, Sayak, Rigaud, Stephanie, Seok, Sang-Cheol, Fu, Guo, Prochenka, Agnieszka, Dworkin, Michael, Gascoigne, Nicholas R. J., Vieland, Veronica J., Sauer, Karsten, Das, Jayajit
Publicado 2014

Peptide selectivity discriminates NK cells from KIR2DL2‐ and KIR2DL3‐positive individuals

por Cassidy, Sorcha, Mukherjee, Sayak, Myint, Thet Mon, Mbiribindi, Berenice, North, Helen, Traherne, James, Mulder, Arend, Claas, Frans HJ, Purbhoo, Marco A, Das, Jayajit, Khakoo, Salim I
Publicado 2014

Role of nanoscale antigen organization on B-cell activation probed using DNA origami

por Veneziano, Rémi, Moyer, Tyson J., Stone, Matthew B., Wamhoff, Eike-Christian, Read, Benjamin J., Mukherjee, Sayak, Shepherd, Tyson R., Das, Jayajit, Schief, William R., Irvine, Darrell J., Bathe, Mark
Publicado 2020

Selective targeting of GARP-LTGFβ axis in the tumor microenvironment augments PD-1 blockade via enhancing CD8(+) T cell antitumor immunity

por Li, Anqi, Chang, Yuzhou, Song, No-Joon, Wu, Xingjun, Chung, Dongjun, Riesenberg, Brian P, Velegraki, Maria, Giuliani, Giuseppe D, Das, Komal, Okimoto, Tamio, Kwon, Hyunwoo, Chakravarthy, Karthik B, Bolyard, Chelsea, Wang, Yi, He, Kai, Gatti-Mays, Margaret, Das, Jayajit, Yang, Yiping, Gewirth, Daniel T, Ma, Qin, Carbone, David, Li, Zihai
Publicado 2022