S Phase–Coupled E2f1 Destruction Ensures Homeostasis in Proliferating Tissues

por Davidson, Jean M., Duronio, Robert J.
Publicado 2012

Retention in the British National Health Service of medical graduates trained in Britain: cohort studies

por Goldacre, Michael J, Davidson, Jean M, Lambert, Trevor W
Publicado 2009

SWI/SNF aberrations sensitize pancreatic cancer cells to DNA crosslinking agents

por Davidson, Jean, Shen, Zhewei, Gong, Xue, Pollack, Jonathan R.
Publicado 2017

Loss of the Histone Pre-mRNA Processing Factor Stem-Loop Binding Protein in Drosophila Causes Genomic Instability and Impaired Cellular Proliferation

por Salzler, Harmony R., Davidson, Jean M., Montgomery, Nathan D., Duronio, Robert J.
Publicado 2009

Integrative Genomics Implicates EGFR as a Downstream Mediator in NKX2-1 Amplified Non-Small Cell Lung Cancer

por Clarke, Nicole, Biscocho, Jewison, Kwei, Kevin A., Davidson, Jean M., Sridhar, Sushmita, Gong, Xue, Pollack, Jonathan R.
Publicado 2015

De novo genome assembly and comparative genomics for the colonial ascidian Botrylloides violaceus

por Sumner, Jack T, Andrasz, Cassidy L, Johnson, Christine A, Wax, Sarah, Anderson, Paul, Keeling, Elena L, Davidson, Jean M
Publicado 2023

ENCODE data at the ENCODE portal

por Sloan, Cricket A., Chan, Esther T., Davidson, Jean M., Malladi, Venkat S., Strattan, J. Seth, Hitz, Benjamin C., Gabdank, Idan, Narayanan, Aditi K., Ho, Marcus, Lee, Brian T., Rowe, Laurence D., Dreszer, Timothy R., Roe, Greg, Podduturi, Nikhil R., Tanaka, Forrest, Hong, Eurie L., Cherry, J. Michael
Publicado 2016

Ontology application and use at the ENCODE DCC

por Malladi, Venkat S., Erickson, Drew T., Podduturi, Nikhil R., Rowe, Laurence D., Chan, Esther T., Davidson, Jean M., Hitz, Benjamin C., Ho, Marcus, Lee, Brian T., Miyasato, Stuart, Roe, Gregory R., Simison, Matt, Sloan, Cricket A., Strattan, J. Seth, Tanaka, Forrest, Kent, W. James, Cherry, J. Michael, Hong, Eurie L.
Publicado 2015

Prevention of data duplication for high throughput sequencing repositories

por Gabdank, Idan, Chan, Esther T, Davidson, Jean M, Hilton, Jason A, Davis, Carrie A, Baymuradov, Ulugbek K, Narayanan, Aditi, Onate, Kathrina C, Graham, Keenan, Miyasato, Stuart R, Dreszer, Timothy R, Strattan, J Seth, Jolanki, Otto, Tanaka, Forrest Y, Hitz, Benjamin C, Sloan, Cricket A, Cherry, J Michael
Publicado 2018

Principles of metadata organization at the ENCODE data coordination center

por Hong, Eurie L., Sloan, Cricket A., Chan, Esther T., Davidson, Jean M., Malladi, Venkat S., Strattan, J. Seth, Hitz, Benjamin C., Gabdank, Idan, Narayanan, Aditi K., Ho, Marcus, Lee, Brian T., Rowe, Laurence D., Dreszer, Timothy R., Roe, Greg R., Podduturi, Nikhil R., Tanaka, Forrest, Hilton, Jason A., Cherry, J. Michael
Publicado 2016

The Encyclopedia of DNA elements (ENCODE): data portal update

por Davis, Carrie A, Hitz, Benjamin C, Sloan, Cricket A, Chan, Esther T, Davidson, Jean M, Gabdank, Idan, Hilton, Jason A, Jain, Kriti, Baymuradov, Ulugbek K, Narayanan, Aditi K, Onate, Kathrina C, Graham, Keenan, Miyasato, Stuart R, Dreszer, Timothy R, Strattan, J Seth, Jolanki, Otto, Tanaka, Forrest Y, Cherry, J Michael
Publicado 2018

SnoVault and encodeD: A novel object-based storage system and applications to ENCODE metadata

por Hitz, Benjamin C., Rowe, Laurence D., Podduturi, Nikhil R., Glick, David I., Baymuradov, Ulugbek K., Malladi, Venkat S., Chan, Esther T., Davidson, Jean M., Gabdank, Idan, Narayana, Aditi K., Onate, Kathrina C., Hilton, Jason, Ho, Marcus C., Lee, Brian T., Miyasato, Stuart R., Dreszer, Timothy R., Sloan, Cricket A., Strattan, J. Seth, Tanaka, Forrest Y., Hong, Eurie L., Cherry, J. Michael
Publicado 2017

Identification of rare-disease genes using blood transcriptome sequencing and large control cohorts

por Frésard, Laure, Smail, Craig, Ferraro, Nicole M., Teran, Nicole A., Li, Xin, Smith, Kevin S., Bonner, Devon, Kernohan, Kristin D., Marwaha, Shruti, Zappala, Zachary, Balliu, Brunilda, Davis, Joe R., Liu, Boxiang, Prybol, Cameron J., Kohler, Jennefer N., Zastrow, Diane B., Reuter, Chloe M., Fisk, Dianna G., Grove, Megan E., Davidson, Jean M., Hartley, Taila, Joshi, Ruchi, Strober, Benjamin J., Utiramerur, Sowmithri, Lind, Lars, Ingelsson, Erik, Battle, Alexis, Bejerano, Gill, Bernstein, Jonathan A., Ashley, Euan A., Boycott, Kym M., Merker, Jason D., Wheeler, Matthew T., Montgomery, Stephen B.
Publicado 2019

An atlas of dynamic chromatin landscapes in mouse fetal development

por Gorkin, David U., Barozzi, Iros, Zhao, Yuan, Zhang, Yanxiao, Huang, Hui, Lee, Ah Young, Li, Bin, Chiou, Joshua, Wildberg, Andre, Ding, Bo, Zhang, Bo, Wang, Mengchi, Strattan, J. Seth, Davidson, Jean M., Qiu, Yunjiang, Afzal, Veena, Akiyama, Jennifer A., Plajzer-Frick, Ingrid, Novak, Catherine S., Kato, Momoe, Garvin, Tyler H., Pham, Quan T., Harrington, Anne N., Mannion, Brandon J., Lee, Elizabeth A., Fukuda-Yuzawa, Yoko, He, Yupeng, Preissl, Sebastian, Chee, Sora, Han, Jee Yun, Williams, Brian A., Trout, Diane, Amrhein, Henry, Yang, Hongbo, Cherry, J. Michael, Wang, Wei, Gaulton, Kyle, Ecker, Joseph R., Shen, Yin, Dickel, Diane E., Visel, Axel, Pennacchio, Len A., Ren, Bing
Publicado 2020

Author Correction: An atlas of dynamic chromatin landscapes in mouse fetal development

por Gorkin, David U., Barozzi, Iros, Zhao, Yuan, Zhang, Yanxiao, Huang, Hui, Lee, Ah Young, Li, Bin, Chiou, Joshua, Wildberg, Andre, Ding, Bo, Zhang, Bo, Wang, Mengchi, Strattan, J. Seth, Davidson, Jean M., Qiu, Yunjiang, Afzal, Veena, Akiyama, Jennifer A., Plajzer-Frick, Ingrid, Novak, Catherine S., Kato, Momoe, Garvin, Tyler H., Pham, Quan T., Harrington, Anne N., Mannion, Brandon J., Lee, Elizabeth A., Fukuda-Yuzawa, Yoko, He, Yupeng, Preissl, Sebastian, Chee, Sora, Han, Jee Yun, Williams, Brian A., Trout, Diane, Amrhein, Henry, Yang, Hongbo, Cherry, J. Michael, Wang, Wei, Gaulton, Kyle, Ecker, Joseph R., Shen, Yin, Dickel, Diane E., Visel, Axel, Pennacchio, Len A., Ren, Bing
Publicado 2020

Author Correction: An atlas of dynamic chromatin landscapes in mouse fetal development

por Gorkin, David U., Barozzi, Iros, Zhao, Yuan, Zhang, Yanxiao, Huang, Hui, Lee, Ah Young, Li, Bin, Chiou, Joshua, Wildberg, Andre, Ding, Bo, Zhang, Bo, Wang, Mengchi, Strattan, J. Seth, Davidson, Jean M., Qiu, Yunjiang, Afzal, Veena, Akiyama, Jennifer A., Plajzer-Frick, Ingrid, Novak, Catherine S., Kato, Momoe, Garvin, Tyler H., Pham, Quan T., Harrington, Anne N., Mannion, Brandon J., Lee, Elizabeth A., Fukuda-Yuzawa, Yoko, He, Yupeng, Preissl, Sebastian, Chee, Sora, Han, Jee Yun, Williams, Brian A., Trout, Diane, Amrhein, Henry, Yang, Hongbo, Cherry, J. Michael, Wang, Wei, Gaulton, Kyle, Ecker, Joseph R., Shen, Yin, Dickel, Diane E., Visel, Axel, Pennacchio, Len A., Ren, Bing
Publicado 2021

The ENCODE Uniform Analysis Pipelines

por Hitz, Benjamin C., Jin-Wook, Lee, Jolanki, Otto, Kagda, Meenakshi S., Graham, Keenan, Sud, Paul, Gabdank, Idan, Strattan, J. Seth, Sloan, Cricket A., Dreszer, Timothy, Rowe, Laurence D., Podduturi, Nikhil R., Malladi, Venkat S., Chan, Esther T., Davidson, Jean M., Ho, Marcus, Miyasato, Stuart, Simison, Matt, Tanaka, Forrest, Luo, Yunhai, Whaling, Ian, Hong, Eurie L., Lee, Brian T., Sandstrom, Richard, Rynes, Eric, Nelson, Jemma, Nishida, Andrew, Ingersoll, Alyssa, Buckley, Michael, Frerker, Mark, Kim, Daniel S, Boley, Nathan, Trout, Diane, Dobin, Alex, Rahmanian, Sorena, Wyman, Dana, Balderrama-Gutierrez, Gabriela, Reese, Fairlie, Durand, Neva C., Dudchenko, Olga, Weisz, David, Rao, Suhas S. P., Blackburn, Alyssa, Gkountaroulis, Dimos, Sadr, Mahdi, Olshansky, Moshe, Eliaz, Yossi, Nguyen, Dat, Bochkov, Ivan, Shamim, Muhammad Saad, Mahajan, Ragini, Aiden, Erez, Gingeras, Tom, Heath, Simon, Hirst, Martin, Kent, W. James, Kundaje, Anshul, Mortazavi, Ali, Wold, Barbara, Cherry, J. Michael
Publicado 2023

The ENCODE Uniform Analysis Pipelines

por Hitz, Benjamin C., Lee, Jin-Wook, Jolanki, Otto, Kagda, Meenakshi S., Graham, Keenan, Sud, Paul, Gabdank, Idan, Strattan, J. Seth, Sloan, Cricket A., Dreszer, Timothy, Rowe, Laurence D., Podduturi, Nikhil R., Malladi, Venkat S., Chan, Esther T., Davidson, Jean M., Ho, Marcus, Miyasato, Stuart, Simison, Matt, Tanaka, Forrest, Luo, Yunhai, Whaling, Ian, Hong, Eurie L., Lee, Brian T., Sandstrom, Richard, Rynes, Eric, Nelson, Jemma, Nishida, Andrew, Ingersoll, Alyssa, Buckley, Michael, Frerker, Mark, Kim, Daniel S, Boley, Nathan, Trout, Diane, Dobin, Alex, Rahmanian, Sorena, Wyman, Dana, Balderrama-Gutierrez, Gabriela, Reese, Fairlie, Durand, Neva C., Dudchenko, Olga, Weisz, David, Rao, Suhas S. P., Blackburn, Alyssa, Gkountaroulis, Dimos, Sadr, Mahdi, Olshansky, Moshe, Eliaz, Yossi, Nguyen, Dat, Bochkov, Ivan, Shamim, Muhammad Saad, Mahajan, Ragini, Aiden, Erez, Gingeras, Tom, Heath, Simon, Hirst, Martin, Kent, W. James, Kundaje, Anshul, Mortazavi, Ali, Wold, Barbara, Cherry, J. Michael
Publicado 2023

Biallelic Mutations in ATP5F1D, which Encodes a Subunit of ATP Synthase, Cause a Metabolic Disorder

por Oláhová, Monika, Yoon, Wan Hee, Thompson, Kyle, Jangam, Sharayu, Fernandez, Liliana, Davidson, Jean M., Kyle, Jennifer E., Grove, Megan E., Fisk, Dianna G., Kohler, Jennefer N., Holmes, Matthew, Dries, Annika M., Huang, Yong, Zhao, Chunli, Contrepois, Kévin, Zappala, Zachary, Frésard, Laure, Waggott, Daryl, Zink, Erika M., Kim, Young-Mo, Heyman, Heino M., Stratton, Kelly G., Webb-Robertson, Bobbie-Jo M., Snyder, Michael, Merker, Jason D., Montgomery, Stephen B., Fisher, Paul G., Feichtinger, René G., Mayr, Johannes A., Hall, Julie, Barbosa, Ines A., Simpson, Michael A., Deshpande, Charu, Waters, Katrina M., Koeller, David M., Metz, Thomas O., Morris, Andrew A., Schelley, Susan, Cowan, Tina, Friederich, Marisa W., McFarland, Robert, Van Hove, Johan L.K., Enns, Gregory M., Yamamoto, Shinya, Ashley, Euan A., Wangler, Michael F., Taylor, Robert W., Bellen, Hugo J., Bernstein, Jonathan A., Wheeler, Matthew T.
Publicado 2018