Understanding cellular function and disease with comparative pathway analysis

por Davis, Melissa J, Ragan, Mark A
Publicado 2013

Stable gene expression for normalisation and single-sample scoring

por Bhuva, Dharmesh D, Cursons, Joseph, Davis, Melissa J
Publicado 2020

Measuring pathway database coverage of the phosphoproteome

por Huckstep, Hannah, Fearnley, Liam G., Davis, Melissa J.
Publicado 2021

MsImpute: Estimation of Missing Peptide Intensity Data in Label-Free Quantitative Mass Spectrometry

por Hediyeh-Zadeh, Soroor, Webb, Andrew I., Davis, Melissa J.
Publicado 2023

Better Than Nothing? Limitations of the Prediction Tool SecretomeP in the Search for Leaderless Secretory Proteins (LSPs) in Plants

por Lonsdale, Andrew, Davis, Melissa J., Doblin, Monika S., Bacic, Antony
Publicado 2016

Automatic, context-specific generation of Gene Ontology slims

por Davis, Melissa J, Sehgal, Muhammad Shoaib B, Ragan, Mark A
Publicado 2010

Protein-protein interaction as a predictor of subcellular location

por Shin, Chang Jin, Wong, Simon, Davis, Melissa J, Ragan, Mark A
Publicado 2009

Visualising associations between paired ‘omics’ data sets

por González, Ignacio, Cao, Kim-Anh Lê, Davis, Melissa J, Déjean, Sébastien
Publicado 2012

Differential co-expression-based detection of conditional relationships in transcriptional data: comparative analysis and application to breast cancer

por Bhuva, Dharmesh D., Cursons, Joseph, Smyth, Gordon K., Davis, Melissa J.
Publicado 2019

RMaNI: Regulatory Module Network Inference framework

por Madhamshettiwar, Piyush B, Maetschke, Stefan R, Davis, Melissa J, Ragan, Mark A
Publicado 2013

Supervised, semi-supervised and unsupervised inference of gene regulatory networks

por Maetschke, Stefan R., Madhamshettiwar, Piyush B., Davis, Melissa J., Ragan, Mark A.
Publicado 2014

Extracting reaction networks from databases–opening Pandora’s box

por Fearnley, Liam G., Davis, Melissa J., Ragan, Mark A., Nielsen, Lars K.
Publicado 2014

Network analysis of an in vitro model of androgen-resistance in prostate cancer

por Detchokul, Sujitra, Elangovan, Aparna, Crampin, Edmund J., Davis, Melissa J., Frauman, Albert G.
Publicado 2015

Large-scale protein-protein post-translational modification extraction with distant supervision and confidence calibrated BioBERT

por Elangovan, Aparna, Li, Yuan, Pires, Douglas E. V., Davis, Melissa J., Verspoor, Karin
Publicado 2022

Gene regulatory network inference: evaluation and application to ovarian cancer allows the prioritization of drug targets

por Madhamshettiwar, Piyush B, Maetschke, Stefan R, Davis, Melissa J, Reverter, Antonio, Ragan, Mark A
Publicado 2012

INsPeCT: INtegrative Platform for Cancer Transcriptomics

por Madhamshettiwar, Piyush B., Maetschke, Stefan R., Davis, Melissa J., Reverter, Antonio, Ragan, Mark A.
Publicado 2014

Single sample scoring of molecular phenotypes

por Foroutan, Momeneh, Bhuva, Dharmesh D., Lyu, Ruqian, Horan, Kristy, Cursons, Joseph, Davis, Melissa J.
Publicado 2018

Using singscore to predict mutation status in acute myeloid leukemia from transcriptomic signatures

por Bhuva, Dharmesh D., Foroutan, Momeneh, Xie, Yi, Lyu, Ruqian, Cursons, Joseph, Davis, Melissa J.
Publicado 2019

vissE.cloud: a webserver to visualise higher order molecular phenotypes from enrichment analysis

por Mohamed, Ahmed, Bhuva, Dharmesh D, Lee, Sam, Liu, Ning, Tan, Chin Wee, Davis, Melissa J
Publicado 2023

mCOPA: analysis of heterogeneous features in cancer expression data

por Wang, Chenwei, Taciroglu, Alperen, Maetschke, Stefan R, Nelson, Colleen C, Ragan, Mark A, Davis, Melissa J
Publicado 2012