Mathematical modeling identifies potential gene structure determinants of co-transcriptional control of alternative pre-mRNA splicing

por Davis-Turak, Jeremy, Johnson, Tracy L, Hoffmann, Alexander
Publicado 2018

Mathematical modeling identifies potential gene structure determinants of co-transcriptional control of alternative pre-mRNA splicing

por Davis-Turak, Jeremy, Johnson, Tracy L, Hoffmann, Alexander
Publicado 2019

A multi-scale approach reveals that NF-κB cRel enforces a B-cell decision to divide

por Shokhirev, Maxim N, Almaden, Jonathan, Davis-Turak, Jeremy, Birnbaum, Harry A, Russell, Theresa M, Vargas, Jesse A D, Hoffmann, Alexander
Publicado 2015

Considering the kinetics of mRNA synthesis in the analysis of the genome and epigenome reveals determinants of co-transcriptional splicing

por Davis-Turak, Jeremy C., Allison, Karmel, Shokhirev, Maxim N., Ponomarenko, Petr, Tsimring, Lev S., Glass, Christopher K., Johnson, Tracy L., Hoffmann, Alexander
Publicado 2015

Dissecting the Regulatory Strategies of NF-κB RelA Target Genes in the Inflammatory Response Reveals Differential Transactivation Logics

por Ngo, Kim A., Kishimoto, Kensei, Davis-Turak, Jeremy, Pimplaskar, Aditya, Cheng, Zhang, Spreafico, Roberto, Chen, Emily Y., Tam, Amy, Ghosh, Gourisankar, Mitchell, Simon, Hoffmann, Alexander
Publicado 2020

CRISPR-Cas9 generated Pompe knock-in murine model exhibits early-onset hypertrophic cardiomyopathy and skeletal muscle weakness

por Huang, Jeffrey Y., Kan, Shih-Hsin, Sandfeld, Emilie K., Dalton, Nancy D., Rangel, Anthony D., Chan, Yunghang, Davis-Turak, Jeremy, Neumann, Jon, Wang, Raymond Y.
Publicado 2020

CRISPR-mediated generation and characterization of a Gaa homozygous c.1935C>A (p.D645E) Pompe disease knock-in mouse model recapitulating human infantile onset-Pompe disease

por Kan, Shih-hsin, Huang, Jeffrey Y., Harb, Jerry, Rha, Allisandra, Dalton, Nancy D., Christensen, Chloe, Chan, Yunghang, Davis-Turak, Jeremy, Neumann, Jonathan, Wang, Raymond Y.
Publicado 2022

Control of RelB during dendritic cell activation integrates canonical and non-canonical NF-κB pathways

por Shih, Vincent F.-S., Davis-Turak, Jeremy, Macal, Monica, Huang, Jenny Q., Ponomarenko, Julia, Kearns, Jeffrey D., Yu, Tony, Fagerlund, Riku, Asagiri, Masataka, Zuniga, Elina I., Hoffmann, Alexander
Publicado 2012

A Pathway Switch Directs BAFF Signaling to Distinct NFκB Transcription Factors in Maturing and Proliferating B Cells

por Almaden, Jonathan V., Tsui, Rachel, Liu, Yi C., Birnbaum, Harry, Shokhirev, Maxim N., Ngo, Kim A., Davis-Turak, Jeremy C., Otero, Dennis, Basak, Soumen, Rickert, Robert C., Hoffmann, Alexander
Publicado 2014

Identification of Omicron-Delta Coinfections Using PCR-Based Genotyping

por Roychoudhury, Pavitra, Luo, Shishi, Hayashibara, Kathleen, Hajian, Pooneh, Mills, Margaret G., Lozach, Jean, Cassens, Tyler, Wendm, Seffir T., Arnould, Isabel, Becker, David, Wesselman, Tim, Davis-Turak, Jeremy, Creager, Richard, Lai, Eric, Jerome, Keith R., Basler, Tracy, Dei Rossi, Andrew, Lee, William, Greninger, Alexander L.
Publicado 2022

A Method for Variant Agnostic Detection of SARS-CoV-2, Rapid Monitoring of Circulating Variants, and Early Detection of Emergent Variants Such as Omicron

por Lai, Eric, Kennedy, Emily B., Lozach, Jean, Hayashibara, Kathleen, Davis-Turak, Jeremy, Becker, David, Brzoska, Pius, Cassens, Tyler, Diamond, Evan, Gandhi, Manoj, Greninger, Alexander L., Hajian, Pooneh, Leonetti, Nicole A., Nguyen, Jason M., O’Donovan, K. M. Clair, Peck, Troy, Ramirez, Jimmy M., Roychoudhury, Pavitra, Sandoval, Efren, Wesselman, Cassandra, Wesselman, Timothy, White, Simon, Williams, Stephen, Wong, David, Yu, Yufei, Creager, Richard S.
Publicado 2022