Publisher Correction: Pluripotent stem cell-derived model of the post-implantation human embryo

por Weatherbee, Bailey A. T., Gantner, Carlos W., Iwamoto-Stohl, Lisa K., Daza, Riza M., Hamazaki, Nobuhiko, Shendure, Jay, Zernicka-Goetz, Magdalena
Publicado 2023

Pluripotent stem cell-derived model of the post-implantation human embryo

por Weatherbee, Bailey A. T., Gantner, Carlos W., Iwamoto-Stohl, Lisa K., Daza, Riza M., Hamazaki, Nobuhiko, Shendure, Jay, Zernicka-Goetz, Magdalena
Publicado 2023

Comprehensive characterization of tissue-specific chromatin accessibility in L2 Caenorhabditis elegans nematodes

por Durham, Timothy J., Daza, Riza M., Gevirtzman, Louis, Cusanovich, Darren A., Bolonduro, Olubusayo, Noble, William Stafford, Shendure, Jay, Waterston, Robert H.
Publicado 2021

High-Capacity Sample Multiplexing for Single Cell Chromatin Accessibility Profiling

por Booth, Gregory T., Daza, Riza M., Srivatsan, Sanjay R., McFaline-Figueroa, José L., Gladden, Rula Green, Furlan, Scott N., Shendure, Jay, Trapnell, Cole
Publicado 2023

High-capacity sample multiplexing for single cell chromatin accessibility profiling

por Booth, Gregory T., Daza, Riza M., Srivatsan, Sanjay R., McFaline-Figueroa, José L., Gladden, Rula Green, Mullen, Andrew C., Furlan, Scott N., Shendure, Jay, Trapnell, Cole
Publicado 2023

In vitro, long-range sequence information for de novo genome assembly via transposase contiguity

por Adey, Andrew, Kitzman, Jacob O., Burton, Joshua N., Daza, Riza, Kumar, Akash, Christiansen, Lena, Ronaghi, Mostafa, Amini, Sasan, L. Gunderson, Kevin, Steemers, Frank J., Shendure, Jay
Publicado 2014

Accurate classification of BRCA1 variants with saturation genome editing

por Findlay, Gregory M., Daza, Riza M., Martin, Beth, Zhang, Melissa D., Leith, Anh P., Gasperini, Molly, Janizek, Joseph D., Huang, Xingfan, Starita, Lea M., Shendure, Jay
Publicado 2018

Fragment Length of Circulating Tumor DNA

por Underhill, Hunter R., Kitzman, Jacob O., Hellwig, Sabine, Welker, Noah C., Daza, Riza, Baker, Daniel N., Gligorich, Keith M., Rostomily, Robert C., Bronner, Mary P., Shendure, Jay
Publicado 2016

A time-resolved, multi-symbol molecular recorder via sequential genome editing

por Choi, Junhong, Chen, Wei, Minkina, Anna, Chardon, Florence M., Suiter, Chase C., Regalado, Samuel G., Domcke, Silvia, Hamazaki, Nobuhiko, Lee, Choli, Martin, Beth, Daza, Riza M., Shendure, Jay
Publicado 2022

Single-cell ATAC-Seq in human pancreatic islets and deep learning upscaling of rare cells reveals cell-specific type 2 diabetes regulatory signatures

por Rai, Vivek, Quang, Daniel X., Erdos, Michael R., Cusanovich, Darren A., Daza, Riza M., Narisu, Narisu, Zou, Luli S., Didion, John P., Guan, Yuanfang, Shendure, Jay, Parker, Stephen C.J., Collins, Francis S.
Publicado 2019

The cis-regulatory dynamics of embryonic development at single cell resolution

por Cusanovich, Darren A., Reddington, James P., Garfield, David A., Daza, Riza, Aghamirzaie, Delasa, Marco-Ferreres, Raquel, Pliner, Hannah, Christiansen, Lena, Qiu, Xiaojie, Steemers, Frank J., Trapnell, Cole, Shendure, Jay, Furlong, Eileen E.M.
Publicado 2018

Decoding long nanopore sequencing reads of natural DNA

por Laszlo, Andrew H., Derrington, Ian M., Ross, Brian C., Brinkerhoff, Henry, Adey, Andrew, Nova, Ian C., Craig, Jonathan M., Langford, Kyle W., Samson, Jenny Mae, Daza, Riza, Doering, Kenji, Shendure, Jay, Gundlach, Jens H.
Publicado 2014

Comprehensive statistical inference of the clonal structure of cancer from multiple biopsies

por Liu, Jie, Halloran, John T., Bilmes, Jeffrey A., Daza, Riza M., Lee, Choli, Mahen, Elisabeth M., Prunkard, Donna, Song, Chaozhong, Blau, Sibel, Dorschner, Michael O., Gadi, Vijayakrishna K., Shendure, Jay, Blau, C. Anthony, Noble, William S.
Publicado 2017

The continuum of Drosophila embryonic development at single-cell resolution

por Calderon, Diego, Blecher-Gonen, Ronnie, Huang, Xingfan, Secchia, Stefano, Kentro, James, Daza, Riza M., Martin, Beth, Dulja, Alessandro, Schaub, Christoph, Trapnell, Cole, Larschan, Erica, O’Connor-Giles, Kate M., Furlong, Eileen E. M., Shendure, Jay
Publicado 2022

Predicting cellular responses to complex perturbations in high‐throughput screens

por Lotfollahi, Mohammad, Klimovskaia Susmelj, Anna, De Donno, Carlo, Hetzel, Leon, Ji, Yuge, Ibarra, Ignacio L, Srivatsan, Sanjay R, Naghipourfar, Mohsen, Daza, Riza M, Martin, Beth, Shendure, Jay, McFaline‐Figueroa, Jose L, Boyeau, Pierre, Wolf, F Alexander, Yakubova, Nafissa, Günnemann, Stephan, Trapnell, Cole, Lopez‐Paz, David, Theis, Fabian J
Publicado 2023

A single-cell transcriptional timelapse of mouse embryonic development, from gastrula to pup

por Qiu, Chengxiang, Martin, Beth K., Welsh, Ian C., Daza, Riza M., Le, Truc-Mai, Huang, Xingfan, Nichols, Eva K., Taylor, Megan L., Fulton, Olivia, O’Day, Diana R., Gomes, Anne Roshella, Ilcisin, Saskia, Srivatsan, Sanjay, Deng, Xinxian, Disteche, Christine M., Noble, William Stafford, Hamazaki, Nobuhiko, Moens, Cecilia B., Kimelman, David, Cao, Junyue, Schier, Alexander F., Spielmann, Malte, Murray, Stephen A., Trapnell, Cole, Shendure, Jay
Publicado 2023

A scalable, fully automated process for construction of sequence-ready barcoded libraries for 454

por Lennon, Niall J, Lintner, Robert E, Anderson, Scott, Alvarez, Pablo, Barry, Andrew, Brockman, William, Daza, Riza, Erlich, Rachel L, Giannoukos, Georgia, Green, Lisa, Hollinger, Andrew, Hoover, Cindi A, Jaffe, David B, Juhn, Frank, McCarthy, Danielle, Perrin, Danielle, Ponchner, Karen, Powers, Taryn L, Rizzolo, Kamran, Robbins, Dana, Ryan, Elizabeth, Russ, Carsten, Sparrow, Todd, Stalker, John, Steelman, Scott, Weiand, Michael, Zimmer, Andrew, Henn, Matthew R, Nusbaum, Chad, Nicol, Robert
Publicado 2010

Structure of the germline genome of Tetrahymena thermophila and relationship to the massively rearranged somatic genome

por Hamilton, Eileen P, Kapusta, Aurélie, Huvos, Piroska E, Bidwell, Shelby L, Zafar, Nikhat, Tang, Haibao, Hadjithomas, Michalis, Krishnakumar, Vivek, Badger, Jonathan H, Caler, Elisabet V, Russ, Carsten, Zeng, Qiandong, Fan, Lin, Levin, Joshua Z, Shea, Terrance, Young, Sarah K, Hegarty, Ryan, Daza, Riza, Gujja, Sharvari, Wortman, Jennifer R, Birren, Bruce W, Nusbaum, Chad, Thomas, Jainy, Carey, Clayton M, Pritham, Ellen J, Feschotte, Cédric, Noto, Tomoko, Mochizuki, Kazufumi, Papazyan, Romeo, Taverna, Sean D, Dear, Paul H, Cassidy-Hanley, Donna M, Xiong, Jie, Miao, Wei, Orias, Eduardo, Coyne, Robert S
Publicado 2016

Mutations causing medullary cystic kidney disease type 1 (MCKD1) lie in a large VNTR in MUC1 missed by massively parallel sequencing

por Kirby, Andrew, Gnirke, Andreas, Jaffe, David B., Barešová, Veronika, Pochet, Nathalie, Blumenstiel, Brendan, Ye, Chun, Aird, Daniel, Stevens, Christine, Robinson, James T., Cabili, Moran N., Gat-Viks, Irit, Kelliher, Edward, Daza, Riza, DeFelice, Matthew, Hůlková, Helena, Sovová, Jana, Vylet’al, Petr, Antignac, Corinne, Guttman, Mitchell, Handsaker, Robert E., Perrin, Danielle, Steelman, Scott, Sigurdsson, Snaevar, Scheinman, Steven J., Sougnez, Carrie, Cibulskis, Kristian, Parkin, Melissa, Green, Todd, Rossin, Elizabeth, Zody, Michael C., Xavier, Ramnik J., Pollak, Martin R., Alper, Seth L., Lindblad-Toh, Kerstin, Gabriel, Stacey, Hart, P. Suzanne, Regev, Aviv, Nusbaum, Chad, Kmoch, Stanislav, Bleyer, Anthony J., Lander, Eric S., Daly, Mark J.
Publicado 2013