Positional gene enrichment analysis of gene sets for high-resolution identification of overrepresented chromosomal regions

por De Preter, Katleen, Barriot, Roland, Speleman, Frank, Vandesompele, Jo, Moreau, Yves
Publicado 2008

IncGraph: Incremental graphlet counting for topology optimisation

por Cannoodt, Robrecht, Ruyssinck, Joeri, Ramon, Jan, De Preter, Katleen, Saeys, Yvan
Publicado 2018

Opportunities and challenges in interpretable deep learning for drug sensitivity prediction of cancer cells

por Samal, Bikash Ranjan, Loers, Jens Uwe, Vermeirssen, Vanessa, De Preter, Katleen
Publicado 2022

Cancer Gene Prioritization for Targeted Resequencing Using FitSNP Scores

por Fieuw, Annelies, De Wilde, Bram, Speleman, Frank, Vandesompele, Jo, De Preter, Katleen
Publicado 2012

Circulating immune cell dynamics as outcome predictors for immunotherapy in non-small cell lung cancer

por Marcos Rubio, Alvaro, Everaert, Celine, Van Damme, Eufra, De Preter, Katleen, Vermaelen, Karim
Publicado 2023

Benchmarking of cell type deconvolution pipelines for transcriptomics data

por Avila Cobos, Francisco, Alquicira-Hernandez, José, Powell, Joseph E., Mestdagh, Pieter, De Preter, Katleen
Publicado 2020

Author Correction: Benchmarking of cell type deconvolution pipelines for transcriptomics data

por Cobos, Francisco Avila, Alquicira-Hernandez, José, Powell, Joseph E., Mestdagh, Pieter, De Preter, Katleen
Publicado 2020

Early and late effects of pharmacological ALK inhibition on the neuroblastoma transcriptome

por Claeys, Shana, Denecker, Geertrui, Cannoodt, Robrecht, Kumps, Candy, Durinck, Kaat, Speleman, Frank, De Preter, Katleen
Publicado 2017

Meta-mining of copy number profiles of high-risk neuroblastoma tumors

por Depuydt, Pauline, Koster, Jan, Boeva, Valentina, Hocking, Toby D., Speleman, Frank, Schleiermacher, Gudrun, De Preter, Katleen
Publicado 2018

Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes

por Vandesompele, Jo, De Preter, Katleen, Pattyn, Filip, Poppe, Bruce, Van Roy, Nadine, De Paepe, Anne, Speleman, Frank
Publicado 2002

Evaluation of a marker independent isolation method for circulating tumor cells in esophageal adenocarcinoma

por Philippron, Annouck, Depypere, Lieven, Oeyen, Steffi, De Laere, Bram, Vandeputte, Charlotte, Nafteux, Philippe, De Preter, Katleen, Pattyn, Piet
Publicado 2021

Zipper plot: visualizing transcriptional activity of genomic regions

por Avila Cobos, Francisco, Anckaert, Jasper, Volders, Pieter-Jan, Everaert, Celine, Rombaut, Dries, Vandesompele, Jo, De Preter, Katleen, Mestdagh, Pieter
Publicado 2017

Measurable impact of RNA quality on gene expression results from quantitative PCR

por Vermeulen, Joëlle, De Preter, Katleen, Lefever, Steve, Nuytens, Justine, De Vloed, Fanny, Derveaux, Stefaan, Hellemans, Jan, Speleman, Frank, Vandesompele, Jo
Publicado 2011

Genome-wide study of the effect of blood collection tubes on the cell-free DNA methylome

por Van Paemel, Ruben, De Koker, Andries, Caggiano, Christa, Morlion, Annelien, Mestdagh, Pieter, De Wilde, Bram, Vandesompele, Jo, De Preter, Katleen
Publicado 2020

The emerging molecular pathogenesis of neuroblastoma: implications for improved risk assessment and targeted therapy

por Van Roy, Nadine, De Preter, Katleen, Hoebeeck, Jasmien, Van Maerken, Tom, Pattyn, Filip, Mestdagh, Pieter, Vermeulen, Joëlle, Vandesompele, Jo, Speleman, Frank
Publicado 2009

External oligonucleotide standards enable cross laboratory comparison and exchange of real-time quantitative PCR data

por Vermeulen, Joëlle, Pattyn, Filip, De Preter, Katleen, Vercruysse, Liesbeth, Derveaux, Stefaan, Mestdagh, Pieter, Lefever, Steve, Hellemans, Jan, Speleman, Frank, Vandesompele, Jo
Publicado 2009

Multiplex Amplicon Quantification (MAQ), a fast and efficient method for the simultaneous detection of copy number alterations in neuroblastoma

por Kumps, Candy, Van Roy, Nadine, Heyrman, Lien, Goossens, Dirk, Del-Favero, Jurgen, Noguera, Rosa, Vandesompele, Jo, Speleman, Frank, De Preter, Katleen
Publicado 2010

A 6-gene signature identifies four molecular subgroups of neuroblastoma

por Abel, Frida, Dalevi, Daniel, Nethander, Maria, Jörnsten, Rebecka, De Preter, Katleen, Vermeulen, Joëlle, Stallings, Raymond, Kogner, Per, Maris, John, Nilsson, Staffan
Publicado 2011

Combined subtractive cDNA cloning and array CGH: an efficient approach for identification of overexpressed genes in DNA amplicons

por De Preter, Katleen, Pattyn, Filip, Berx, Geert, Strumane, Kristin, Menten, Björn, Van Roy, Frans, De Paepe, Anne, Speleman, Frank, Vandesompele, Jo
Publicado 2004

CADM1 is a strong neuroblastoma candidate gene that maps within a 3.72 Mb critical region of loss on 11q23

por Michels, Evi, Hoebeeck, Jasmien, De Preter, Katleen, Schramm, Alexander, Brichard, Bénédicte, De Paepe, Anne, Eggert, Angelika, Laureys, Geneviève, Vandesompele, Jo, Speleman, Frank
Publicado 2008