MiningABs: mining associated biomarkers across multi-connected gene expression datasets

por Cheng, Chun-Pei, DeBoever, Christopher, Frazer, Kelly A, Liu, Yu-Cheng, Tseng, Vincent S
Publicado 2014

Context dependent substitution biases vary within the human genome

por Nevarez, P Andrew, DeBoever, Christopher M, Freeland, Benjamin J, Quitt, Marissa A, Bush, Eliot C
Publicado 2010

Systematic transcriptome analysis reveals tumor-specific isoforms for ovarian cancer diagnosis and therapy

por Barrett, Christian L., DeBoever, Christopher, Jepsen, Kristen, Saenz, Cheryl C., Carson, Dennis A., Frazer, Kelly A.
Publicado 2015

Whole Transcriptome Sequencing Enables Discovery and Analysis of Viruses in Archived Primary Central Nervous System Lymphomas

por DeBoever, Christopher, Reid, Erin G., Smith, Erin N., Wang, Xiaoyun, Dumaop, Wilmar, Harismendy, Olivier, Carson, Dennis, Richman, Douglas, Masliah, Eliezer, Frazer, Kelly A.
Publicado 2013

Transcriptome Sequencing Reveals Potential Mechanism of Cryptic 3’ Splice Site Selection in SF3B1-mutated Cancers

por DeBoever, Christopher, Ghia, Emanuela M., Shepard, Peter J., Rassenti, Laura, Barrett, Christian L., Jepsen, Kristen, Jamieson, Catriona H. M., Carson, Dennis, Kipps, Thomas J., Frazer, Kelly A.
Publicado 2015

Medical relevance of protein-truncating variants across 337,205 individuals in the UK Biobank study

por DeBoever, Christopher, Tanigawa, Yosuke, Lindholm, Malene E., McInnes, Greg, Lavertu, Adam, Ingelsson, Erik, Chang, Chris, Ashley, Euan A., Bustamante, Carlos D., Daly, Mark J., Rivas, Manuel A.
Publicado 2018

Components of genetic associations across 2,138 phenotypes in the UK Biobank highlight adipocyte biology

por Tanigawa, Yosuke, Li, Jiehan, Justesen, Johanne M., Horn, Heiko, Aguirre, Matthew, DeBoever, Christopher, Chang, Chris, Narasimhan, Balasubramanian, Lage, Kasper, Hastie, Trevor, Park, Chong Y., Bejerano, Gill, Ingelsson, Erik, Rivas, Manuel A.
Publicado 2019

Discovery and quality analysis of a comprehensive set of structural variants and short tandem repeats

por Jakubosky, David, Smith, Erin N., D’Antonio, Matteo, Jan Bonder, Marc, Young Greenwald, William W., D’Antonio-Chronowska, Agnieszka, Matsui, Hiroko, Stegle, Oliver, Montgomery, Stephen B., DeBoever, Christopher, Frazer, Kelly A.
Publicado 2020

Distinct splicing signatures affect converged pathways in myelodysplastic syndrome patients carrying mutations in different splicing regulators

por Qiu, Jinsong, Zhou, Bing, Thol, Felicitas, Zhou, Yu, Chen, Liang, Shao, Changwei, DeBoever, Christopher, Hou, Jiayi, Li, Hairi, Chaturvedi, Anuhar, Ganser, Arnold, Bejar, Rafael, Zhang, Dong-Er, Fu, Xiang-Dong, Heuser, Michael
Publicado 2016

Identifying DNase I hypersensitive sites as driver distal regulatory elements in breast cancer

por D′Antonio, Matteo, Weghorn, Donate, D′Antonio-Chronowska, Agnieszka, Coulet, Florence, Olson, Katrina M., DeBoever, Christopher, Drees, Frauke, Arias, Angelo, Alakus, Hakan, Richardson, Andrea L., Schwab, Richard B., Farley, Emma K., Sunyaev, Shamil R., Frazer, Kelly A
Publicado 2017

Properties of structural variants and short tandem repeats associated with gene expression and complex traits

por Jakubosky, David, D’Antonio, Matteo, Bonder, Marc Jan, Smail, Craig, Donovan, Margaret K. R., Young Greenwald, William W., Matsui, Hiroko, D’Antonio-Chronowska, Agnieszka, Stegle, Oliver, Smith, Erin N., Montgomery, Stephen B., DeBoever, Christopher, Frazer, Kelly A.
Publicado 2020

Allele-specific NKX2-5 binding underlies multiple genetic associations with human electrocardiographic traits

por Benaglio, Paola, D’Antonio-Chronowska, Agnieszka, Ma, Wubin, Yang, Feng, Young Greenwald, William W., Donovan, Margaret K. R., DeBoever, Christopher, Li, He, Drees, Frauke, Singhal, Sanghamitra, Matsui, Hiroko, van Setten, Jessica, Sotoodehnia, Nona, Gaulton, Kyle J., Smith, Erin N., D’Antonio, Matteo, Rosenfeld, Michael G., Frazer, Kelly A.
Publicado 2019

iPSCORE: A Resource of 222 iPSC Lines Enabling Functional Characterization of Genetic Variation across a Variety of Cell Types

por Panopoulos, Athanasia D., D'Antonio, Matteo, Benaglio, Paola, Williams, Roy, Hashem, Sherin I., Schuldt, Bernhard M., DeBoever, Christopher, Arias, Angelo D., Garcia, Melvin, Nelson, Bradley C., Harismendy, Olivier, Jakubosky, David A., Donovan, Margaret K.R., Greenwald, William W., Farnam, KathyJean, Cook, Megan, Borja, Victor, Miller, Carl A., Grinstein, Jonathan D., Drees, Frauke, Okubo, Jonathan, Diffenderfer, Kenneth E., Hishida, Yuriko, Modesto, Veronica, Dargitz, Carl T., Feiring, Rachel, Zhao, Chang, Aguirre, Aitor, McGarry, Thomas J., Matsui, Hiroko, Li, He, Reyna, Joaquin, Rao, Fangwen, O'Connor, Daniel T., Yeo, Gene W., Evans, Sylvia M., Chi, Neil C., Jepsen, Kristen, Nariai, Naoki, Müller, Franz-Josef, Goldstein, Lawrence S.B., Izpisua Belmonte, Juan Carlos, Adler, Eric, Loring, Jeanne F., Berggren, W. Travis, D'Antonio-Chronowska, Agnieszka, Smith, Erin N., Frazer, Kelly A.
Publicado 2017

Deconvoluting complex correlates of COVID-19 severity with a multi-omic pandemic tracking strategy

por Parikh, Victoria N., Ioannidis, Alexander G., Jimenez-Morales, David, Gorzynski, John E., De Jong, Hannah N., Liu, Xiran, Roque, Jonasel, Cepeda-Espinoza, Victoria P., Osoegawa, Kazutoyo, Hughes, Chris, Sutton, Shirley C., Youlton, Nathan, Joshi, Ruchi, Amar, David, Tanigawa, Yosuke, Russo, Douglas, Wong, Justin, Lauzon, Jessie T., Edelson, Jacob, Mas Montserrat, Daniel, Kwon, Yongchan, Rubinacci, Simone, Delaneau, Olivier, Cappello, Lorenzo, Kim, Jaehee, Shoura, Massa J., Raja, Archana N., Watson, Nathaniel, Hammond, Nathan, Spiteri, Elizabeth, Mallempati, Kalyan C., Montero-Martín, Gonzalo, Christle, Jeffrey, Kim, Jennifer, Kirillova, Anna, Seo, Kinya, Huang, Yong, Zhao, Chunli, Moreno-Grau, Sonia, Hershman, Steven G., Dalton, Karen P., Zhen, Jimmy, Kamm, Jack, Bhatt, Karan D., Isakova, Alina, Morri, Maurizio, Ranganath, Thanmayi, Blish, Catherine A., Rogers, Angela J., Nadeau, Kari, Yang, Samuel, Blomkalns, Andra, O’Hara, Ruth, Neff, Norma F., DeBoever, Christopher, Szalma, Sándor, Wheeler, Matthew T., Gates, Christian M., Farh, Kyle, Schroth, Gary P., Febbo, Phil, deSouza, Francis, Cornejo, Omar E., Fernandez-Vina, Marcelo, Kistler, Amy, Palacios, Julia A., Pinsky, Benjamin A., Bustamante, Carlos D., Rivas, Manuel A., Ashley, Euan A.
Publicado 2022