Antigen test swabs are comparable to nasopharyngeal swabs for sequencing of SARS-CoV-2

por Hassouneh, Sayf Al-Deen, Trujillo, Alexa, Ali, Sobur, Cella, Eleonora, Johnston, Catherine, DeRuff, Katherine C., Sabeti, Pardis C., Azarian, Taj
Publicado 2023

Avant-garde: An automated data-driven DIA data curation tool.

por Jacome, Alvaro Sebastian Vaca, Peckner, Ryan, Shulman, Nicholas, Krug, Karsten, DeRuff, Katherine C., Officer, Adam, Christianson, Karen E., MacLean, Brendan, MacCoss, Michael J., Carr, Steven A., Jaffe, Jacob D.
Publicado 2020

The 2022 RSV surge was driven by multiple viral lineages

por Adams, Gordon, Moreno, Gage K., Petros, Brittany A., Uddin, Rockib, Levine, Zoe, Kotzen, Ben, Messer, Katelyn, Dobbins, Sabrina T., DeRuff, Katherine C., Loreth, Christine, Brock-Fisher, Taylor, Schaffner, Stephen F., Chaluvadi, Sushma, Kanjilal, Sanjat, Luban, Jeremy, Ozonoff, Al, Park, Daniel, Turbett, Sarah, Siddle, Katherine J., MacInnis, Bronwyn L., Sabeti, Pardis, Lemieux, Jacob
Publicado 2023

RSV Surge in the USA and Viral Lineages, 2022

por Adams, Gordon, Moreno, Gage K., Petros, Brittany A., Uddin, Rockib, Levine, Zoe, Kotzen, Ben, Messer, Katelyn, Dobbins, Sabrina T., DeRuff, Katherine C., Loreth, Christine, Brock-Fisher, Taylor, Schaffner, Stephen F., Chaluvadi, Sushma, Kanjilal, Sanjat, Luban, Jeremy, Ozonoff, Al, Park, Daniel, Turbett, Sarah, Siddle, Katie J., MacInnis, Bronwyn L., Sabeti, Pardis, Lemieux, Jacob E.
Publicado 2023

Proteomic profiling dataset of chemical perturbations in multiple biological backgrounds

por Dele-Oni, Deborah O., Christianson, Karen E., Egri, Shawn B., Vaca Jacome, Alvaro Sebastian, DeRuff, Katherine C., Mullahoo, James, Sharma, Vagisha, Davison, Desiree, Ko, Tak, Bula, Michael, Blanchard, Joel, Young, Jennie Z., Litichevskiy, Lev, Lu, Xiaodong, Lam, Daniel, Asiedu, Jacob K., Toder, Caidin, Officer, Adam, Peckner, Ryan, MacCoss, Michael J., Tsai, Li-Huei, Carr, Steven A., Papanastasiou, Malvina, Jaffe, Jacob D.
Publicado 2021

Phylogenetic analysis of SARS-CoV-2 in the Boston area highlights the role of recurrent importation and superspreading events.

por Lemieux, Jacob E., Siddle, Katherine J., Shaw, Bennett M., Loreth, Christine, Schaffner, Stephen F., Gladden-Young, Adrianne, Adams, Gordon, Fink, Timelia, Tomkins-Tinch, Christopher H., Krasilnikova, Lydia A., DeRuff, Katherine C., Rudy, Melissa, Bauer, Matthew R., Lagerborg, Kim A., Normandin, Erica, Chapman, Sinead B., Reilly, Steven K., Anahtar, Melis N., Lin, Aaron E., Carter, Amber, Myhrvold, Cameron, Kemball, Molly E., Chaluvadi, Sushma, Cusick, Caroline, Flowers, Katelyn, Neumann, Anna, Cerrato, Felecia, Farhat, Maha, Slater, Damien, Harris, Jason B., Branda, John, Hooper, David, Gaeta, Jessie M., Baggett, Travis P., O’Connell, James, Gnirke, Andreas, Lieberman, Tami D., Philippakis, Anthony, Burns, Meagan, Brown, Catherine M., Luban, Jeremy, Ryan, Edward T., Turbett, Sarah E., LaRocque, Regina C., Hanage, William P., Gallagher, Glen R., Madoff, Lawrence C., Smole, Sandra, Pierce, Virginia M., Rosenberg, Eric, Sabeti, Pardis C., Park, Daniel J., Maclnnis, Bronwyn L.
Publicado 2020

Phylogenetic analysis of SARS-CoV-2 in Boston highlights the impact of superspreading events

por Lemieux, Jacob E., Siddle, Katherine J., Shaw, Bennett M., Loreth, Christine, Schaffner, Stephen F., Gladden-Young, Adrianne, Adams, Gordon, Fink, Timelia, Tomkins-Tinch, Christopher H., Krasilnikova, Lydia A., DeRuff, Katherine C., Rudy, Melissa, Bauer, Matthew R., Lagerborg, Kim A., Normandin, Erica, Chapman, Sinéad B., Reilly, Steven K., Anahtar, Melis N., Lin, Aaron E., Carter, Amber, Myhrvold, Cameron, Kemball, Molly E., Chaluvadi, Sushma, Cusick, Caroline, Flowers, Katelyn, Neumann, Anna, Cerrato, Felecia, Farhat, Maha, Slater, Damien, Harris, Jason B., Branda, John A., Hooper, David, Gaeta, Jessie M., Baggett, Travis P., O’Connell, James, Gnirke, Andreas, Lieberman, Tami D., Philippakis, Anthony, Burns, Meagan, Brown, Catherine M., Luban, Jeremy, Ryan, Edward T., Turbett, Sarah E., LaRocque, Regina C., Hanage, William P., Gallagher, Glen R., Madoff, Lawrence C., Smole, Sandra, Pierce, Virginia M., Rosenberg, Eric, Sabeti, Pardis C., Park, Daniel J., MacInnis, Bronwyn L.
Publicado 2020

Multimodal surveillance of SARS-CoV-2 at a university enables development of a robust outbreak response framework

por Petros, Brittany A., Paull, Jillian S., Tomkins-Tinch, Christopher H., Loftness, Bryn C., DeRuff, Katherine C., Nair, Parvathy, Gionet, Gabrielle L., Benz, Aaron, Brock-Fisher, Taylor, Hughes, Michael, Yurkovetskiy, Leonid, Mulaudzi, Shandukani, Leenerman, Emma, Nyalile, Thomas, Moreno, Gage K., Specht, Ivan, Sani, Kian, Adams, Gordon, Babet, Simone V., Baron, Emily, Blank, Jesse T., Boehm, Chloe, Botti-Lodovico, Yolanda, Brown, Jeremy, Buisker, Adam R., Burcham, Timothy, Chylek, Lily, Cronan, Paul, Dauphin, Ann, Desreumaux, Valentine, Doss, Megan, Flynn, Belinda, Gladden-Young, Adrianne, Glennon, Olivia, Harmon, Hunter D., Hook, Thomas V., Kary, Anton, King, Clay, Loreth, Christine, Marrs, Libby, McQuade, Kyle J., Milton, Thorsen T., Mulford, Jada M., Oba, Kyle, Pearlman, Leah, Schifferli, Mark, Schmidt, Madelyn J., Tandus, Grace M., Tyler, Andy, Vodzak, Megan E., Krohn Bevill, Kelly, Colubri, Andres, MacInnis, Bronwyn L., Ozsoy, A. Zeynep, Parrie, Eric, Sholtes, Kari, Siddle, Katherine J., Fry, Ben, Luban, Jeremy, Park, Daniel J., Marshall, John, Bronson, Amy, Schaffner, Stephen F., Sabeti, Pardis C.
Publicado 2022

Evidence of transmission from fully vaccinated individuals in a large outbreak of the SARS-CoV-2 Delta variant in Provincetown, Massachusetts

por Siddle, Katherine J., Krasilnikova, Lydia A., Moreno, Gage K., Schaffner, Stephen F., Vostok, Johanna, Fitzgerald, Nicholas A., Lemieux, Jacob E., Barkas, Nikolaos, Loreth, Christine, Specht, Ivan, Tomkins-Tinch, Christopher H., Silbert, Jillian, Schaeffer, Beau, Taylor, Bradford P., Loftness, Bryn, Johnson, Hillary, Schubert, Petra L., Shephard, Hanna M., Doucette, Matthew, Fink, Timelia, Lang, Andrew S., Baez, Stephanie, Beauchamp, John, Hennigan, Scott, Buzby, Erika, Ash, Stephanie, Brown, Jessica, Clancy, Selina, Cofsky, Seana, Gagne, Luc, Hall, Joshua, Harrington, Rachel, Gionet, Gabrielle L., DeRuff, Katherine C., Vodzak, Megan E., Adams, Gordon C., Dobbins, Sabrina T., Slack, Sarah D., Reilly, Steven K., Anderson, Lisa M., Cipicchio, Michelle C., DeFelice, Matthew T., Grimsby, Jonna L., Anderson, Scott E., Blumenstiel, Brendan S., Meldrim, James C., Rooke, Heather M., Vicente, Gina, Smith, Natasha L., Messer, Katelyn S., Reagan, Faye L., Mandese, Zoe M., Lee, Matthew D., Ray, Marianne C., Fisher, Marissa E., Ulcena, Maesha A., Nolet, Corey M., English, Sean E., Larkin, Katie L., Vernest, Kyle, Chaluvadi, Sushma, Arvidson, Deirdre, Melchiono, Maurice, Covell, Theresa, Harik, Vaira, Brock-Fisher, Taylor, Dunn, Molly, Kearns, Amanda, Hanage, William P., Bernard, Clare, Philippakis, Anthony, Lennon, Niall J, Gabriel, Stacey B., Gallagher, Glen R., Smole, Sandra, Madoff, Lawrence C., Brown, Catherine M., Park, Daniel J., MacInnis, Bronwyn L., Sabeti, Pardis C.
Publicado 2021

Transmission from vaccinated individuals in a large SARS-CoV-2 Delta variant outbreak

por Siddle, Katherine J., Krasilnikova, Lydia A., Moreno, Gage K., Schaffner, Stephen F., Vostok, Johanna, Fitzgerald, Nicholas A., Lemieux, Jacob E., Barkas, Nikolaos, Loreth, Christine, Specht, Ivan, Tomkins-Tinch, Christopher H., Paull, Jillian S., Schaeffer, Beau, Taylor, Bradford P., Loftness, Bryn, Johnson, Hillary, Schubert, Petra L., Shephard, Hanna M., Doucette, Matthew, Fink, Timelia, Lang, Andrew S., Baez, Stephanie, Beauchamp, John, Hennigan, Scott, Buzby, Erika, Ash, Stephanie, Brown, Jessica, Clancy, Selina, Cofsky, Seana, Gagne, Luc, Hall, Joshua, Harrington, Rachel, Gionet, Gabrielle L., DeRuff, Katherine C., Vodzak, Megan E., Adams, Gordon C., Dobbins, Sabrina T., Slack, Sarah D., Reilly, Steven K., Anderson, Lisa M., Cipicchio, Michelle C., DeFelice, Matthew T., Grimsby, Jonna L., Anderson, Scott E., Blumenstiel, Brendan S., Meldrim, James C., Rooke, Heather M., Vicente, Gina, Smith, Natasha L., Messer, Katelyn S., Reagan, Faye L., Mandese, Zoe M., Lee, Matthew D., Ray, Marianne C., Fisher, Marissa E., Ulcena, Maesha A., Nolet, Corey M., English, Sean E., Larkin, Katie L., Vernest, Kyle, Chaluvadi, Sushma, Arvidson, Deirdre, Melchiono, Maurice, Covell, Theresa, Harik, Vaira, Brock-Fisher, Taylor, Dunn, Molly, Kearns, Amanda, Hanage, William P., Bernard, Clare, Philippakis, Anthony, Lennon, Niall J., Gabriel, Stacey B., Gallagher, Glen R., Smole, Sandra, Madoff, Lawrence C., Brown, Catherine M., Park, Daniel J., MacInnis, Bronwyn L., Sabeti, Pardis C.
Publicado 2022

The Origins and Future of Sentinel: An Early-Warning System for Pandemic Preemption and Response

por Botti-Lodovico, Yolanda, Nair, Parvathy, Nosamiefan, Dolo, Stremlau, Matthew, Schaffner, Stephen, Agignoae, Sebastian V., Aiyepada, John Oke, Ajogbasile, Fehintola V., Akpede, George O., Alhasan, Foday, Andersen, Kristian G., Asogun, Danny A., Ayodeji, Oladele Oluwafemi, Badiane, Aida S., Barnes, Kayla, Bauer, Matthew R., Bell-Kareem, Antoinette, Benard, Muoebonam Ekene, Benevolence, Ebo Ohomoime, Blessing, Osiemi, Boehm, Chloe K., Boisen, Matthew L., Bond, Nell G., Branco, Luis M., Butts, Michael J., Carter, Amber, Colubri, Andres, Deme, Awa B., DeRuff, Katherine C., Diédhiou, Younousse, Edamhande, Akhilomen Patience, Elhamoumi, Siham, Engel, Emily J., Eromon, Philomena, Fallah, Mosoka, Folarin, Onikepe A., Fry, Ben, Garry, Robert, Gaye, Amy, Gbakie, Michael, Gevao, Sahr M., Gionet, Gabrielle, Gladden-Young, Adrianne, Goba, Augustine, Gomis, Jules Francois, Happi, Anise N., Houghton, Mary, Ihekwuazu, Chikwe, Iruolagbe, Christopher Ojemiega, Jackson, Jonathan, Jalloh, Simbirie, Johnson, Jeremy, Kanneh, Lansana, Kayode, Adeyemi, Kemball, Molly, Kingsley, Ojide Chiedozie, Koroma, Veronica, Kotliar, Dylan, Mehta, Samar, Metsky, Hayden C., Michael, Airende, Mirhashemi, Marzieh Ezzaty, Modjarrad, Kayvon, Momoh, Mambu, Myhrvold, Cameron A., Naregose, Okonofua Grace, Ndiaye, Tolla, Ndiaye, Mouhamadou, Ndiaye, Aliou, Normandin, Erica, Odia, Ikponmwosa, Oguzie, Judith Uche, Okogbenin, Sylvanus A., Okokhere, Peter O., Okolie, Johnson, Olawoye, Idowu B., Olumade, Testimony J., Oluniyi, Paul E., Omoregie, Omigie, Park, Daniel J., Paye, Mariétou Faye, Petros, Brittany, Philippakis, Anthony A., Priscilla, Abechi, Ricks, Alan, Rimoin, Anne, Sandi, John Demby, Schieffelin, John S., Schreiber, Monica, Seck, Mame Cheikh, Siddiqui, Sameed, Siddle, Katherine, Smither, Allison R., Sy, Mouhamad, Sy, Ngayo, Tomkins-Tinch, Christopher H., Tomori, Oyewale, Ugwu, Chinedu, Uwanibe, Jessica N., Uyigue, Eghosasere Anthonia, Victoria, Dada Ireti, Vinzé, Anika, Vodzak, Megan E., Welch, Nicole, Wurie, Haja Isatta, Zoumarou, Daba, Grant, Donald S., Ndiaye, Daouda, MacInnis, Bronwyn, Sabeti, Pardis C., Happi, Christian
Publicado 2021

Tales of diversity: Genomic and morphological characteristics of forty-six Arthrobacter phages

por Klyczek, Karen K., Bonilla, J. Alfred, Jacobs-Sera, Deborah, Adair, Tamarah L., Afram, Patricia, Allen, Katherine G., Archambault, Megan L., Aziz, Rahat M., Bagnasco, Filippa G., Ball, Sarah L., Barrett, Natalie A., Benjamin, Robert C., Blasi, Christopher J., Borst, Katherine, Braun, Mary A., Broomell, Haley, Brown, Conner B., Brynell, Zachary S., Bue, Ashley B., Burke, Sydney O., Casazza, William, Cautela, Julia A., Chen, Kevin, Chimalakonda, Nitish S., Chudoff, Dylan, Connor, Jade A., Cross, Trevor S., Curtis, Kyra N., Dahlke, Jessica A., Deaton, Bethany M., Degroote, Sarah J., DeNigris, Danielle M., DeRuff, Katherine C., Dolan, Milan, Dunbar, David, Egan, Marisa S., Evans, Daniel R., Fahnestock, Abby K., Farooq, Amal, Finn, Garrett, Fratus, Christopher R., Gaffney, Bobby L., Garlena, Rebecca A., Garrigan, Kelly E., Gibbon, Bryan C., Goedde, Michael A., Guerrero Bustamante, Carlos A., Harrison, Melinda, Hartwell, Megan C., Heckman, Emily L., Huang, Jennifer, Hughes, Lee E., Hyduchak, Kathryn M., Jacob, Aswathi E., Kaku, Machika, Karstens, Allen W., Kenna, Margaret A., Khetarpal, Susheel, King, Rodney A., Kobokovich, Amanda L., Kolev, Hannah, Konde, Sai A., Kriese, Elizabeth, Lamey, Morgan E., Lantz, Carter N., Lapin, Jonathan S., Lawson, Temiloluwa O., Lee, In Young, Lee, Scott M., Lee-Soety, Julia Y., Lehmann, Emily M., London, Shawn C., Lopez, A. Javier, Lynch, Kelly C., Mageeney, Catherine M., Martynyuk, Tetyana, Mathew, Kevin J., Mavrich, Travis N., McDaniel, Christopher M., McDonald, Hannah, McManus, C. Joel, Medrano, Jessica E., Mele, Francis E., Menninger, Jennifer E., Miller, Sierra N., Minick, Josephine E., Nabua, Courtney T., Napoli, Caroline K., Nkangabwa, Martha, Oates, Elizabeth A., Ott, Cassandra T., Pellerino, Sarah K., Pinamont, William J., Pirnie, Ross T., Pizzorno, Marie C., Plautz, Emilee J., Pope, Welkin H., Pruett, Katelyn M., Rickstrew, Gabbi, Rimple, Patrick A., Rinehart, Claire A., Robinson, Kayla M., Rose, Victoria A., Russell, Daniel A., Schick, Amelia M., Schlossman, Julia, Schneider, Victoria M., Sells, Chloe A., Sieker, Jeremy W., Silva, Morgan P., Silvi, Marissa M., Simon, Stephanie E., Staples, Amanda K., Steed, Isabelle L., Stowe, Emily L., Stueven, Noah A., Swartz, Porter T., Sweet, Emma A., Sweetman, Abigail T., Tender, Corrina, Terry, Katrina, Thomas, Chrystal, Thomas, Daniel S., Thompson, Allison R., Vanderveen, Lorianna, Varma, Rohan, Vaught, Hannah L., Vo, Quynh D., Vonberg, Zachary T., Ware, Vassie C., Warrad, Yasmene M., Wathen, Kaitlyn E., Weinstein, Jonathan L., Wyper, Jacqueline F., Yankauskas, Jakob R., Zhang, Christine, Hatfull, Graham F.
Publicado 2017