Sequence Variations in the Flagellar Antigen Genes fliC (H25) and fliC (H28) of Escherichia coli and Their Use in Identification and Characterization of Enterohemorrhagic E. coli (...

por Beutin, Lothar, Delannoy, Sabine, Fach, Patrick
Publicado 2015

Genetic Analysis and Detection of fliC(H1) and fliC(H12) Genes Coding for Serologically Closely Related Flagellar Antigens in Human and Animal Pathogenic Escherichia coli

por Beutin, Lothar, Delannoy, Sabine, Fach, Patrick
Publicado 2016

Hybrid Assembly from 75 E. coli Genomes Isolated from French Bovine Food Products between 1995 and 2016

por Jaudou, Sandra, Tran, Mai-Lan, Vorimore, Fabien, Fach, Patrick, Delannoy, Sabine
Publicado 2023

Evaluation of high molecular weight DNA extraction methods for long-read sequencing of Shiga toxin-producing Escherichia coli

por Jaudou, Sandra, Tran, Mai-Lan, Vorimore, Fabien, Fach, Patrick, Delannoy, Sabine
Publicado 2022

Emerging types of Shiga toxin-producing E. coli (STEC) O178 present in cattle, deer, and humans from Argentina and Germany

por Miko, Angelika, Rivas, Marta, Bentancor, Adriana, Delannoy, Sabine, Fach, Patrick, Beutin, Lothar
Publicado 2014

The Mobilome; A Major Contributor to Escherichia coli stx2-Positive O26:H11 Strains Intra-Serotype Diversity

por Delannoy, Sabine, Mariani-Kurkdjian, Patricia, Webb, Hattie E., Bonacorsi, Stephane, Fach, Patrick
Publicado 2017

Combination of whole genome sequencing and supervised machine learning provides unambiguous identification of eae-positive Shiga toxin-producing Escherichia coli

por Vorimore, Fabien, Jaudou, Sandra, Tran, Mai-Lan, Richard, Hugues, Fach, Patrick, Delannoy, Sabine
Publicado 2023

The Escherichia coli Serogroup O1 and O2 Lipopolysaccharides Are Encoded by Multiple O-antigen Gene Clusters

por Delannoy, Sabine, Beutin, Lothar, Mariani-Kurkdjian, Patricia, Fleiss, Aubin, Bonacorsi, Stéphane, Fach, Patrick
Publicado 2017

Characterization of Colistin-Resistant Escherichia coli Isolated from Diseased Pigs in France

por Delannoy, Sabine, Le Devendec, Laetitia, Jouy, Eric, Fach, Patrick, Drider, Djamel, Kempf, Isabelle
Publicado 2017

Draft Genome Sequences of Human-Pathogenic Escherichia coli O26:H11 Strains Carrying the stx(2) Gene Only and Circulating in France

por Delannoy, Sabine, Mariani-Kurkdjian, Patricia, Bonacorsi, Stephane, Liguori, Sandrine, Ison, Sarah A., Fach, Patrick
Publicado 2015

A Novel High-Throughput Method for Molecular Detection of Human Pathogenic Viruses Using a Nanofluidic Real-Time PCR System

por Coudray-Meunier, Coralie, Fraisse, Audrey, Martin-Latil, Sandra, Delannoy, Sabine, Fach, Patrick, Perelle, Sylvie
Publicado 2016

Development of a High Resolution Virulence Allelic Profiling (HReVAP) Approach Based on the Accessory Genome of Escherichia coli to Characterize Shiga-Toxin Producing E. coli (STEC...

por Michelacci, Valeria, Orsini, Massimiliano, Knijn, Arnold, Delannoy, Sabine, Fach, Patrick, Caprioli, Alfredo, Morabito, Stefano
Publicado 2016

Quantification of Hepatitis E Virus in Naturally-Contaminated Pig Liver Products

por Martin-Latil, Sandra, Hennechart-Collette, Catherine, Delannoy, Sabine, Guillier, Laurent, Fach, Patrick, Perelle, Sylvie
Publicado 2016

Revisiting the STEC Testing Approach: Using espK and espV to Make Enterohemorrhagic Escherichia coli (EHEC) Detection More Reliable in Beef

por Delannoy, Sabine, Chaves, Byron D., Ison, Sarah A., Webb, Hattie E., Beutin, Lothar, Delaval, José, Billet, Isabelle, Fach, Patrick
Publicado 2016

Change in the Structure of Escherichia coli Population and the Pattern of Virulence Genes along a Rural Aquatic Continuum

por Petit, Fabienne, Clermont, Olivier, Delannoy, Sabine, Servais, Pierre, Gourmelon, Michèle, Fach, Patrick, Oberlé, Kenny, Fournier, Matthieu, Denamur, Erick, Berthe, Thierry
Publicado 2017

Upscaling the Surveillance of Tick-Borne Pathogens in the French Caribbean Islands

por Gondard, Mathilde, Delannoy, Sabine, Pinarello, Valérie, Aprelon, Rosalie, Devillers, Elodie, Galon, Clémence, Pradel, Jennifer, Vayssier-Taussat, Muriel, Albina, Emmanuel, Moutailler, Sara
Publicado 2020

A step forward for Shiga toxin-producing Escherichia coli identification and characterization in raw milk using long-read metagenomics

por Jaudou, Sandra, Deneke, Carlus, Tran, Mai-Lan, Schuh, Elisabeth, Goehler, André, Vorimore, Fabien, Malorny, Burkhard, Fach, Patrick, Grützke, Josephine, Delannoy, Sabine
Publicado 2022

Emergence of New ST301 Shiga Toxin-Producing Escherichia coli Clones Harboring Extra-Intestinal Virulence Traits in Europe

por Cointe, Aurélie, Bizot, Etienne, Delannoy, Sabine, Fach, Patrick, Bidet, Philippe, Birgy, André, Weill, François-Xavier, Lefèvre, Sophie, Mariani-Kurkdjian, Patricia, Bonacorsi, Stéphane
Publicado 2021

Exploring Long-Read Metagenomics for Full Characterization of Shiga Toxin-Producing Escherichia coli in Presence of Commensal E. coli

por Jaudou, Sandra, Deneke, Carlus, Tran, Mai-Lan, Salzinger, Carina, Vorimore, Fabien, Goehler, André, Schuh, Elisabeth, Malorny, Burkhard, Fach, Patrick, Grützke, Josephine, Delannoy, Sabine
Publicado 2023

Characterization of Shiga Toxin Subtypes and Virulence Genes in Porcine Shiga Toxin-Producing Escherichia coli

por Baranzoni, Gian Marco, Fratamico, Pina M., Gangiredla, Jayanthi, Patel, Isha, Bagi, Lori K., Delannoy, Sabine, Fach, Patrick, Boccia, Federica, Anastasio, Aniello, Pepe, Tiziana
Publicado 2016