Heat Inactivation of Listeria monocytogenes on Pecans, Macadamia Nuts, and Sunflower Seeds

por Den Bakker, Meghan, den Bakker, Henk C., Diez-Gonzalez, Francisco
Publicado 2021

Lineage specific recombination rates and microevolution in Listeria monocytogenes

por den Bakker, Henk C, Didelot, Xavier, Fortes, Esther D, Nightingale, Kendra K, Wiedmann, Martin
Publicado 2008

Ultra-fast search of all deposited bacterial and viral genomic data

por Bradley, Phelim, Den Bakker, Henk C, Rocha, Eduardo P. C., McVean, Gil, Iqbal, Zamin
Publicado 2019

Characterization of the cytolethal distending toxin (typhoid toxin) in non-typhoidal Salmonella serovars

por Rodriguez-Rivera, Lorraine D, Bowen, Barbara M, den Bakker, Henk C, Duhamel, Gerald E, Wiedmann, Martin
Publicado 2015

Characterizing the gut microbiome of broilers raised under conventional and no antibiotics ever practices

por Novoa Rama, Estefanía, Bailey, Matthew, Kumar, Sanjay, Leone, Cortney, den Bakker, Henk C., Thippareddi, Harshavardhan, Singh, Manpreet
Publicado 2023

Genomic characterization provides new insight into Salmonella phage diversity

por Moreno Switt, Andrea I, Orsi, Renato H, den Bakker, Henk C, Vongkamjan, Kitiya, Altier, Craig, Wiedmann, Martin
Publicado 2013

Complete Genome Sequences of Four Salmonella enterica Strains (Including Those of Serotypes Montevideo, Mbandaka, and Lubbock) Isolated from Peripheral Lymph Nodes of Healthy Cattl...

por Bugarel, Marie, Cook, Peter W., den Bakker, Henk C., Harhay, Dayna, Nightingale, Kendra K., Loneragan, Guy H.
Publicado 2019

Two Draft Genome Sequences of a New Serovar of Salmonella enterica, Serovar Lubbock

por Bugarel, Marie, den Bakker, Henk C., Nightingale, Kendra K., Brichta-Harhay, Dayna M., Edrington, Thomas S., Loneragan, Guy H.
Publicado 2015

Complete Genome Sequences of Three Listeria monocytogenes Bacteriophage Propagation Strains

por Hudson, Lauren K., Peters, Tracey Lee, Bryan, Daniel W., Song, Yaxiong, den Bakker, Henk C., Denes, Thomas G.
Publicado 2021

Draft Genome Sequences of Two Lactobacillus johnsonii and Three Ligilactobacillus salivarius Strains Isolated from Intestinal Microbiomes of Chickens

por Reed, Alyxandra, Olszewska, Magdalena A., Mann, Amy, Novoa Rama, Estefanía, Thippareddi, Harshavardhan, Singh, Manpreet, den Bakker, Henk C.
Publicado 2022

SneakerNet: A modular quality assurance and quality check workflow for primary genomic and metagenomic read data

por Griswold, Taylor, Kapsak, Curtis, Chen, Jessica C., den Bakker, Henk C., Williams, Grant, Kelley, Alyssa, Vidyaprakash, Eshaw, Katz, Lee S.
Publicado 2021

Complete Genome Sequence of a Serotype 7 Listeria monocytogenes Strain, FSL R9-0915

por Peters, Tracey Lee, Hudson, Lauren K., Bryan, Daniel W., Song, Yaxiong, den Bakker, Henk C., Kucerova, Zuzana, Denes, Thomas G.
Publicado 2021

Mashtree: a rapid comparison of whole genome sequence files

por Katz, Lee S., Griswold, Taylor, Morrison, Shatavia S., Caravas, Jason A., Zhang, Shaokang, den Bakker, Henk C., Deng, Xiangyu, Carleton, Heather A.
Publicado 2019

Carbapenem-Resistant Bacteria Recovered from Faeces of Dairy Cattle in the High Plains Region of the USA

por Webb, Hattie E., Bugarel, Marie, den Bakker, Henk C., Nightingale, Kendra K., Granier, Sophie A., Scott, H. Morgan, Loneragan, Guy H.
Publicado 2016

Genomic Diversity of Listeria monocytogenes Isolated from Clinical and Non-Clinical Samples in Chile

por Toledo, Viviana, den Bakker, Henk C., Hormazábal, Juan Carlos, González-Rocha, Gerardo, Bello-Toledo, Helia, Toro, Magaly, Moreno-Switt, Andrea I.
Publicado 2018

Complete Genome Sequence of the Porcine Strain Brachyspira pilosicoli P43/6/78(T)

por Lin, Changyou, den Bakker, Henk C., Suzuki, Haruo, Lefébure, Tristan, Ponnala, Lalit, Sun, Qi, Stanhope, Michael J., Wiedmann, Martin, Duhamel, Gérald E.
Publicado 2013

Quantitative dynamics of Salmonella and E. coli in feces of feedlot cattle treated with ceftiofur and chlortetracycline

por Ohta, Naomi, Norby, Bo, Loneragan, Guy H., Vinasco, Javier, den Bakker, Henk C., Lawhon, Sara D., Norman, Keri N., Scott, Harvey M.
Publicado 2019

Genomic characterization of Salmonella Cerro ST367, an emerging Salmonella subtype in cattle in the United States

por Rodriguez-Rivera, Lorraine D, Moreno Switt, Andrea I, Degoricija, Lovorka, Fang, Rixun, Cummings, Craig A, Furtado, Manohar R, Wiedmann, Martin, den Bakker, Henk C
Publicado 2014

Comparative genomics of the bacterial genus Listeria: Genome evolution is characterized by limited gene acquisition and limited gene loss

por den Bakker, Henk C, Cummings, Craig A, Ferreira, Vania, Vatta, Paolo, Orsi, Renato H, Degoricija, Lovorka, Barker, Melissa, Petrauskene, Olga, Furtado, Manohar R, Wiedmann, Martin
Publicado 2010

Targeted Amplicon Sequencing for Single-Nucleotide-Polymorphism Genotyping of Attaching and Effacing Escherichia coli O26:H11 Cattle Strains via a High-Throughput Library Preparati...

por Ison, Sarah A., Delannoy, Sabine, Bugarel, Marie, Nagaraja, Tiruvoor G., Renter, David G., den Bakker, Henk C., Nightingale, Kendra K., Fach, Patrick, Loneragan, Guy H.
Publicado 2016