VARNA: Interactive drawing and editing of the RNA secondary structure

por Darty, Kévin, Denise, Alain, Ponty, Yann
Publicado 2009

A meta-approach for improving the prediction and the functional annotation of ortholog groups

por Pereira, Cécile, Denise, Alain, Lespinet, Olivier
Publicado 2014

CoMetGeNe: mining conserved neighborhood patterns in metabolic and genomic contexts

por Zaharia, Alexandra, Labedan, Bernard, Froidevaux, Christine, Denise, Alain
Publicado 2019

GARN: Sampling RNA 3D Structure Space with Game Theory and Knowledge-Based Scoring Strategies

por Boudard, Mélanie, Bernauer, Julie, Barth, Dominique, Cohen, Johanne, Denise, Alain
Publicado 2015

Mining for recurrent long-range interactions in RNA structures reveals embedded hierarchies in network families

por Reinharz, Vladimir, Soulé, Antoine, Westhof, Eric, Waldispühl, Jérôme, Denise, Alain
Publicado 2018

On the predictibility of A-minor motifs from their local contexts

por Gianfrotta, Coline, Reinharz, Vladimir, Lespinet, Olivier, Barth, Dominique, Denise, Alain
Publicado 2022

Finding recurrent RNA structural networks with fast maximal common subgraphs of edge-colored graphs

por Soulé, Antoine, Reinharz, Vladimir, Sarrazin-Gendron, Roman, Denise, Alain, Waldispühl, Jérôme
Publicado 2021

BRASERO: A Resource for Benchmarking RNA Secondary Structure Comparison Algorithms

por Allali, Julien, Saule, Cédric, Chauve, Cédric, d'Aubenton-Carafa, Yves, Denise, Alain, Drevet, Christine, Ferraro, Pascal, Gautheret, Daniel, Herrbach, Claire, Leclerc, Fabrice, de Monte, Antoine, Ouangraoua, Aida, Sagot, Marie-France, Termier, Michel, Thermes, Claude, Touzet, Hélène
Publicado 2012