DNA-Encoded Chromatin Structural Intron Boundary Signals Identify Conserved Genes with Common Function

por Fincher, Justin A., Tyson, Gary S., Dennis, Jonathan H.
Publicado 2015

Commentary: Epigenetic Regulation of Phosphodiesterases 2A and 3A Underlies Compromised β-Adrenergic Signaling in an iPSC Model of Dilated Cardiomyopathy

por Cole, Lauren A., Dennis, Jonathan H., Chase, P. Bryant
Publicado 2016

Stimulation of the Drosophila immune system alters genome-wide nucleosome occupancy

por Ren, Yingxue, Vera, Daniel L., Hughes, Kimberly A., Dennis, Jonathan H.
Publicado 2015

Nucleosome Repositioning: A Novel Mechanism for Nicotine- and Cocaine-Induced Epigenetic Changes

por Brown, Amber N., Vied, Cynthia, Dennis, Jonathan H., Bhide, Pradeep G.
Publicado 2015

Changes in nucleosome occupancy occur in a chromosome specific manner

por Sexton, Brittany S., Druliner, Brooke R., Avey, Denis, Zhu, Fanxiu, Dennis, Jonathan H.
Publicado 2014

Virus detection via programmable Type III-A CRISPR-Cas systems

por Sridhara, Sagar, Goswami, Hemant N., Whyms, Charlisa, Dennis, Jonathan H., Li, Hong
Publicado 2021

Hierarchical regulation of the genome: global changes in nucleosome organization potentiate genome response

por Sexton, Brittany S., Druliner, Brooke R., Vera, Daniel L., Avey, Denis, Zhu, Fanxiu, Dennis, Jonathan H.
Publicado 2016

Multiple roles of H2A.Z in regulating promoter chromatin architecture in human cells

por Cole, Lauren, Kurscheid, Sebastian, Nekrasov, Maxim, Domaschenz, Renae, Vera, Daniel L., Dennis, Jonathan H., Tremethick, David J.
Publicado 2021

Chromatin patterns associated with lung adenocarcinoma progression

por Druliner, Brooke R., Fincher, Justin A., Sexton, Brittany S., Vera, Daniel L., Roche, Michael, Lyle, Stephen, Dennis, Jonathan H.
Publicado 2013

iSeg: an efficient algorithm for segmentation of genomic and epigenomic data

por Girimurugan, Senthil B., Liu, Yuhang, Lung, Pei-Yau, Vera, Daniel L., Dennis, Jonathan H., Bass, Hank W., Zhang, Jinfeng
Publicado 2018

Comprehensive nucleosome mapping of the human genome in cancer progression

por Druliner, Brooke R., Vera, Daniel, Johnson, Ruth, Ruan, Xiaoyang, Apone, Lynn M., Dimalanta, Eileen T., Stewart, Fiona J., Boardman, Lisa, Dennis, Jonathan H.
Publicado 2015

Pre-replication complex proteins assemble at regions of low nucleosome occupancy within the Chinese hamster dihydrofolate reductase initiation zone

por Lubelsky, Yoav, Sasaki, Takayo, Kuipers, Marjorie A., Lucas, Isabelle, Le Beau, Michelle M., Carignon, Sandra, Debatisse, Michelle, Prinz, Joseph A., Dennis, Jonathan H., Gilbert, David M.
Publicado 2011

The native cistrome and sequence motif families of the maize ear

por Savadel, Savannah D., Hartwig, Thomas, Turpin, Zachary M., Vera, Daniel L., Lung, Pei-Yau, Sui, Xin, Blank, Max, Frommer, Wolf B., Dennis, Jonathan H., Zhang, Jinfeng, Bass, Hank W.
Publicado 2021

Chromatin structure profile data from DNS-seq: Differential nuclease sensitivity mapping of four reference tissues of B73 maize (Zea mays L)

por Turpin, Zachary M., Vera, Daniel L., Savadel, Savannah D., Lung, Pei-Yau, Wear, Emily E., Mickelson-Young, Leigh, Thompson, William F., Hanley-Bowdoin, Linda, Dennis, Jonathan H., Zhang, Jinfeng, Bass, Hank W.
Publicado 2018

The spring-loaded genome: Nucleosome redistributions are widespread, transient, and DNA-directed

por Sexton, Brittany S., Avey, Denis, Druliner, Brooke R., Fincher, Justin A., Vera, Daniel L., Grau, Daniel J., Borowsky, Mark L., Gupta, Shobhit, Girimurugan, Senthil B., Chicken, Eric, Zhang, Jinfeng, Noble, William S., Zhu, Fanxiu, Kingston, Robert E., Dennis, Jonathan H.
Publicado 2014

Topologically associating domains are stable units of replication-timing regulation

por Pope, Benjamin D., Ryba, Tyrone, Dileep, Vishnu, Yue, Feng, Wu, Weisheng, Denas, Olgert, Vera, Daniel L., Wang, Yanli, Hansen, R. Scott, Canfield, Theresa K., Thurman, Robert E., Cheng, Yong, Gülsoy, Günhan, Dennis, Jonathan H., Snyder, Michael P., Stamatoyannopoulos, John A., Taylor, James, Hardison, Ross C., Kahveci, Tamer, Ren, Bing, Gilbert, David M.
Publicado 2014