ECCB 2014: The 13(th) European Conference on Computational Biology

por Devignes, Marie-Dominique, Moreau, Yves
Publicado 2014

CroMaSt: a workflow for assessing protein domain classification by cross-mapping of structural instances between domain databases and structural alignment

por Dhondge, Hrishikesh, Chauvot de Beauchêne, Isaure, Devignes, Marie-Dominique
Publicado 2023

ECDomainMiner: discovering hidden associations between enzyme commission numbers and Pfam domains

por Alborzi, Seyed Ziaeddin, Devignes, Marie-Dominique, Ritchie, David W.
Publicado 2017

Computational discovery of direct associations between GO terms and protein domains

por Alborzi, Seyed Ziaeddin, Ritchie, David W., Devignes, Marie-Dominique
Publicado 2018

Improving automatic GO annotation with semantic similarity

por Sarker, Bishnu, Khare, Navya, Devignes, Marie-Dominique, Aridhi, Sabeur
Publicado 2022

FAIR-Checker: supporting digital resource findability and reuse with Knowledge Graphs and Semantic Web standards

por Gaignard, Alban, Rosnet, Thomas, De Lamotte, Frédéric, Lefort, Vincent, Devignes, Marie-Dominique
Publicado 2023

Ontology-guided data preparation for discovering genotype-phenotype relationships

por Coulet, Adrien, Smaïl-Tabbone, Malika, Benlian, Pascale, Napoli, Amedeo, Devignes, Marie-Dominique
Publicado 2008

HexServer: an FFT-based protein docking server powered by graphics processors

por Macindoe, Gary, Mavridis, Lazaros, Venkatraman, Vishwesh, Devignes, Marie-Dominique, Ritchie, David W.
Publicado 2010

IntelliGO: a new vector-based semantic similarity measure including annotation origin

por Benabderrahmane, Sidahmed, Smail-Tabbone, Malika, Poch, Olivier, Napoli, Amedeo, Devignes, Marie-Dominique
Publicado 2010

KBDOCK 2013: a spatial classification of 3D protein domain family interactions

por Ghoorah, Anisah W., Devignes, Marie-Dominique, Smaïl-Tabbone, Malika, Ritchie, David W.
Publicado 2014

Discovering associations between adverse drug events using pattern structures and ontologies

por Personeni, Gabin, Bresso, Emmanuel, Devignes, Marie-Dominique, Dumontier, Michel, Smaïl-Tabbone, Malika, Coulet, Adrien
Publicado 2017

PPIDomainMiner: Inferring domain-domain interactions from multiple sources of protein-protein interactions

por Alborzi, Seyed Ziaeddin, Ahmed Nacer, Amina, Najjar, Hiba, Ritchie, David W., Devignes, Marie-Dominique
Publicado 2021

A Structure-Based Classification and Analysis of Protein Domain Family Binding Sites and Their Interactions

por Ghoorah, Anisah W., Devignes, Marie-Dominique, Alborzi, Seyed Ziaeddin, Smaïl-Tabbone, Malika, Ritchie, David W.
Publicado 2015

Integrative relational machine-learning for understanding drug side-effect profiles

por Bresso, Emmanuel, Grisoni, Renaud, Marchetti, Gino, Karaboga, Arnaud Sinan, Souchet, Devignes, Marie-Dominique, Smaïl-Tabbone, Malika
Publicado 2013

Prediction of Monomer Isomery in Florine: A Workflow Dedicated to Nonribosomal Peptide Discovery

por Caradec, Thibault, Pupin, Maude, Vanvlassenbroeck, Aurélien, Devignes, Marie-Dominique, Smaïl-Tabbone, Malika, Jacques, Philippe, Leclère, Valérie
Publicado 2014

Molecular-evaluated and explainable drug repurposing for COVID-19 using ensemble knowledge graph embedding

por Islam, Md Kamrul, Amaya-Ramirez, Diego, Maigret, Bernard, Devignes, Marie-Dominique, Aridhi, Sabeur, Smaïl-Tabbone, Malika
Publicado 2023

New Insights into the Classification and Integration Specificity of Streptococcus Integrative Conjugative Elements through Extensive Genome Exploration

por Ambroset, Chloé, Coluzzi, Charles, Guédon, Gérard, Devignes, Marie-Dominique, Loux, Valentin, Lacroix, Thomas, Payot, Sophie, Leblond-Bourget, Nathalie
Publicado 2016

A Glimpse into the World of Integrative and Mobilizable Elements in Streptococci Reveals an Unexpected Diversity and Novel Families of Mobilization Proteins

por Coluzzi, Charles, Guédon, Gérard, Devignes, Marie-Dominique, Ambroset, Chloé, Loux, Valentin, Lacroix, Thomas, Payot, Sophie, Leblond-Bourget, Nathalie
Publicado 2017

Low-Dose Alkylphenol Exposure Promotes Mammary Epithelium Alterations and Transgenerational Developmental Defects, But Does Not Enhance Tumorigenic Behavior of Breast Cancer Cells

por Chamard-Jovenin, Clémence, Thiebaut, Charlène, Chesnel, Amand, Bresso, Emmanuel, Morel, Chloé, Smail-Tabbone, Malika, Devignes, Marie-Dominique, Boukhobza, Taha, Dumond, Hélène
Publicado 2017

Singular Interface Dynamics of the SARS-CoV-2 Delta Variant Explained with Contact Perturbation Analysis

por Gheeraert, Aria, Vuillon, Laurent, Chaloin, Laurent, Moncorgé, Olivier, Very, Thibaut, Perez, Serge, Leroux, Vincent, Chauvot de Beauchêne, Isaure, Mias-Lucquin, Dominique, Devignes, Marie-Dominique, Rivalta, Ivan, Maigret, Bernard
Publicado 2022