Incidence and prognostic impact of HER2‐positivity loss after dual HER2‐directed neoadjuvant therapy for HER2+ breast cancer

por LeVee, Alexis, Spector, Kellie, Larkin, Brigid, Dezem, Felipe, Plummer, Jasmine, Dadmanesh, Farnaz, Patil, Sujata, McArthur, Heather L.
Publicado 2023

Optimizing exosomal RNA isolation for RNA-Seq analyses of archival sera specimens

por Prendergast, Emily N., de Souza Fonseca, Marcos Abraão, Dezem, Felipe Segato, Lester, Jenny, Karlan, Beth Y., Noushmehr, Houtan, Lin, Xianzhi, Lawrenson, Kate
Publicado 2018

A machine learning one-class logistic regression model to predict stemness for single cell transcriptomics and spatial omics

por Dezem, Felipe Segato, Marção, Maycon, Ben-Cheikh, Bassem, Nikulina, Nadya, Omotoso, Ayodele, Burnett, Destiny, Coelho, Priscila, Hurley, Judith, Gomez, Carmen, Phan-Everson, Tien, Ong, Giang, Martelotto, Luciano, Lewis, Zachary R., George, Sophia, Braubach, Oliver, Malta, Tathiane M., Plummer, Jasmine
Publicado 2023

Super-Enhancer-Associated LncRNA UCA1 Interacts Directly with AMOT to Activate YAP Target Genes in Epithelial Ovarian Cancer

por Lin, Xianzhi, Spindler, Tassja J., de Souza Fonseca, Marcos Abraão, Corona, Rosario I., Seo, Ji-Heui, Dezem, Felipe Segato, Li, Lewyn, Lee, Janet M., Long, Henry W., Sellers, Thomas A., Karlan, Beth Y., Noushmehr, Houtan, Freedman, Matthew L., Gayther, Simon A., Lawrenson, Kate
Publicado 2019

US Severe Acute Respiratory Syndrome Coronavirus 2 Epsilon Variant: Highly Transmissible but With an Adjusted Muted Host T-Cell Response

por Plummer, Jasmine T, Contreras, Deisy, Zhang, Wenjuan, Binek, Aleksandra, Zhang, Ruan, Dezem, Felipe, Chen, Stephanie S, Davis, Brian D, Sincuir Martinez, Jorge, Stotland, Aleksandr, Kreimer, Simion, Makhoul, Elias, Heneidi, Saleh, Eno, Celeste, Shin, Bongha, Berg, Anders H, Cheng, Susan, Jordan, Stanley C, Vail, Eric, Van Eyk, Jennifer E, Morgan, Margie A
Publicado 2022

Predicting master transcription factors from pan-cancer expression data

por Reddy, Jessica, Fonseca, Marcos A. S., Corona, Rosario I., Nameki, Robbin, Segato Dezem, Felipe, Klein, Isaac A., Chang, Heidi, Chaves-Moreira, Daniele, Afeyan, Lena K., Malta, Tathiane M., Lin, Xianzhi, Abbasi, Forough, Font-Tello, Alba, Sabedot, Thais, Cejas, Paloma, Rodríguez-Malavé, Norma, Seo, Ji-Heui, Lin, De-Chen, Matulonis, Ursula, Karlan, Beth Y., Gayther, Simon A., Pasaniuc, Bogdan, Gusev, Alexander, Noushmehr, Houtan, Long, Henry, Freedman, Matthew L., Drapkin, Ronny, Young, Richard A., Abraham, Brian J., Lawrenson, Kate
Publicado 2021

Pleiotropy-guided transcriptome imputation from normal and tumor tissues identifies candidate susceptibility genes for breast and ovarian cancer

por Kar, Siddhartha P., Considine, Daniel P.C., Tyrer, Jonathan P., Plummer, Jasmine T., Chen, Stephanie, Dezem, Felipe S., Barbeira, Alvaro N., Rajagopal, Padma S., Rosenow, Will T., Moreno, Fernando, Bodelon, Clara, Chang-Claude, Jenny, Chenevix-Trench, Georgia, deFazio, Anna, Dörk, Thilo, Ekici, Arif B., Ewing, Ailith, Fountzilas, George, Goode, Ellen L., Hartman, Mikael, Heitz, Florian, Hillemanns, Peter, Høgdall, Estrid, Høgdall, Claus K., Huzarski, Tomasz, Jensen, Allan, Karlan, Beth Y., Khusnutdinova, Elza, Kiemeney, Lambertus A., Kjaer, Susanne K., Klapdor, Rüdiger, Köbel, Martin, Li, Jingmei, Liebrich, Clemens, May, Taymaa, Olsson, Håkan, Permuth, Jennifer B., Peterlongo, Paolo, Radice, Paolo, Ramus, Susan J., Riggan, Marjorie J., Risch, Harvey A., Saloustros, Emmanouil, Simard, Jacques, Szafron, Lukasz M., Titus, Linda, Thompson, Cheryl L., Vierkant, Robert A., Winham, Stacey J., Zheng, Wei, Doherty, Jennifer A., Berchuck, Andrew, Lawrenson, Kate, Im, Hae Kyung, Manichaikul, Ani W., Pharoah, Paul D.P., Gayther, Simon A., Schildkraut, Joellen M.
Publicado 2021

Copy Number Variants Are Ovarian Cancer Risk Alleles at Known and Novel Risk Loci

por DeVries, Amber A, Dennis, Joe, Tyrer, Jonathan P, Peng, Pei-Chen, Coetzee, Simon G, Reyes, Alberto L, Plummer, Jasmine T, Davis, Brian D, Chen, Stephanie S, Dezem, Felipe Segato, Aben, Katja K H, Anton-Culver, Hoda, Antonenkova, Natalia N, Beckmann, Matthias W, Beeghly-Fadiel, Alicia, Berchuck, Andrew, Bogdanova, Natalia V, Bogdanova-Markov, Nadja, Brenton, James D, Butzow, Ralf, Campbell, Ian, Chang-Claude, Jenny, Chenevix-Trench, Georgia, Cook, Linda S, DeFazio, Anna, Doherty, Jennifer A, Dörk, Thilo, Eccles, Diana M, Eliassen, A Heather, Fasching, Peter A, Fortner, Renée T, Giles, Graham G, Goode, Ellen L, Goodman, Marc T, Gronwald, Jacek, Håkansson, Niclas, Hildebrandt, Michelle A T, Huff, Chad, Huntsman, David G, Jensen, Allan, Kar, Siddhartha, Karlan, Beth Y, Khusnutdinova, Elza K, Kiemeney, Lambertus A, Kjaer, Susanne K, Kupryjanczyk, Jolanta, Labrie, Marilyne, Lambrechts, Diether, Le, Nhu D, Lubiński, Jan, May, Taymaa, Menon, Usha, Milne, Roger L, Modugno, Francesmary, Monteiro, Alvaro N, Moysich, Kirsten B, Odunsi, Kunle, Olsson, Håkan, Pearce, Celeste L, Pejovic, Tanja, Ramus, Susan J, Riboli, Elio, Riggan, Marjorie J, Romieu, Isabelle, Sandler, Dale P, Schildkraut, Joellen M, Setiawan, V Wendy, Sieh, Weiva, Song, Honglin, Sutphen, Rebecca, Terry, Kathryn L, Thompson, Pamela J, Titus, Linda, Tworoger, Shelley S, Van Nieuwenhuysen, Els, Edwards, Digna Velez, Webb, Penelope M, Wentzensen, Nicolas, Whittemore, Alice S, Wolk, Alicja, Wu, Anna H, Ziogas, Argyrios, Freedman, Matthew L, Lawrenson, Kate, Pharoah, Paul D P, Easton, Douglas F, Gayther, Simon A, Jones, Michelle R
Publicado 2022