Editorial: Applications of biological networks in biomedicine

por Maracaja-Coutinho, Vinicius, Di Genova, Alex, Siegel, Anne, Latorre, Mauricio
Publicado 2023

Fast-SG: an alignment-free algorithm for hybrid assembly

por Di Genova, Alex, Ruz, Gonzalo A, Sagot, Marie-France, Maass, Alejandro
Publicado 2018

Efficient hybrid de novo assembly of human genomes with WENGAN

por Di Genova, Alex, Buena-Atienza, Elena, Ossowski, Stephan, Sagot, Marie-France
Publicado 2020

SalmonDB: a bioinformatics resource for Salmo salar and Oncorhynchus mykiss

por Di Génova, Alex, Aravena, Andrés, Zapata, Luis, González, Mauricio, Maass, Alejandro, Iturra, Patricia
Publicado 2011

The genome sequence of the soft-rot fungus Penicillium purpurogenum reveals a high gene dosage for lignocellulolytic enzymes

por Mardones, Wladimir, Di Genova, Alex, Cortés, María Paz, Travisany, Dante, Maass, Alejandro, Eyzaguirre, Jaime
Publicado 2018

Identification of two putative reference genes from grapevine suitable for gene expression analysis in berry and related tissues derived from RNA-Seq data

por González-Agüero, Mauricio, García-Rojas, Miguel, Di Genova, Alex, Correa, José, Maass, Alejandro, Orellana, Ariel, Hinrichsen, Patricio
Publicado 2013

A molecular phenotypic map of malignant pleural mesothelioma

por Di Genova, Alex, Mangiante, Lise, Sexton-Oates, Alexandra, Voegele, Catherine, Fernandez-Cuesta, Lynnette, Alcala, Nicolas, Foll, Matthieu
Publicado 2023

Transcriptome profiling of grapevine seedless segregants during berry development reveals candidate genes associated with berry weight

por Muñoz-Espinoza, Claudia, Di Genova, Alex, Correa, José, Silva, Romina, Maass, Alejandro, González-Agüero, Mauricio, Orellana, Ariel, Hinrichsen, Patricio
Publicado 2016

Identification of SNPs and InDels associated with berry size in table grapes integrating genetic and transcriptomic approaches

por Muñoz-Espinoza, Claudia, Di Genova, Alex, Sánchez, Alicia, Correa, José, Espinoza, Alonso, Meneses, Claudio, Maass, Alejandro, Orellana, Ariel, Hinrichsen, Patricio
Publicado 2020

Mycoplasma hyopneumoniae J elicits an antioxidant response and decreases the expression of ciliary genes in infected swine epithelial cells

por Mucha, Scheila G., Ferrarini, Mariana G., Moraga, Carol, Di Genova, Alex, Guyon, Laurent, Tardy, Florence, Rome, Sophie, Sagot, Marie-France, Zaha, Arnaldo
Publicado 2020

Whole genome comparison between table and wine grapes reveals a comprehensive catalog of structural variants

por Di Genova, Alex, Almeida, Andrea Miyasaka, Muñoz-Espinoza, Claudia, Vizoso, Paula, Travisany, Dante, Moraga, Carol, Pinto, Manuel, Hinrichsen, Patricio, Orellana, Ariel, Maass, Alejandro
Publicado 2014

Genome-wide association analysis reveals loci associated with resistance against Piscirickettsia salmonis in two Atlantic salmon (Salmo salar L.) chromosomes

por Correa, Katharina, Lhorente, Jean P., López, María E., Bassini, Liane, Naswa, Sudhir, Deeb, Nader, Di Genova, Alex, Maass, Alejandro, Davidson, William S., Yáñez, José M.
Publicado 2015

Global gene expression analysis provides insight into local adaptation to geothermal streams in tadpoles of the Andean toad Rhinella spinulosa

por Pastenes, Luis, Valdivieso, Camilo, Di Genova, Alex, Travisany, Dante, Hart, Andrew, Montecino, Martín, Orellana, Ariel, Gonzalez, Mauricio, Gutiérrez, Rodrigo A., Allende, Miguel L., Maass, Alejandro, Méndez, Marco A.
Publicado 2017

Comparing genomic signatures of domestication in two Atlantic salmon (Salmo salar L.) populations with different geographical origins

por López, Maria E., Benestan, Laura, Moore, Jean‐Sebastien, Perrier, Charles, Gilbey, John, Di Genova, Alex, Maass, Alejandro, Diaz, Diego, Lhorente, Jean‐Paul, Correa, Katharina, Neira, Roberto, Bernatchez, Louis, Yáñez, José M.
Publicado 2018

Whole Genome Sequence, Variant Discovery and Annotation in Mapuche-Huilliche Native South Americans

por Vidal, Elena A., Moyano, Tomás C., Bustos, Bernabé I., Pérez-Palma, Eduardo, Moraga, Carol, Riveras, Eleodoro, Montecinos, Alejandro, Azócar, Lorena, Soto, Daniela C., Vidal, Mabel, Di Genova, Alex, Puschel, Klaus, Nürnberg, Peter, Buch, Stephan, Hampe, Jochen, Allende, Miguel L., Cambiazo, Verónica, González, Mauricio, Hodar, Christian, Montecino, Martín, Muñoz-Espinoza, Claudia, Orellana, Ariel, Reyes-Jara, Angélica, Travisany, Dante, Vizoso, Paula, Moraga, Mauricio, Eyheramendy, Susana, Maass, Alejandro, De Ferrari, Giancarlo V., Miquel, Juan Francisco, Gutiérrez, Rodrigo A.
Publicado 2019

Development of a small panel of SNPs to infer ancestry in Chileans that distinguishes Aymara and Mapuche components

por Verdugo, Ricardo A., Di Genova, Alex, Herrera, Luisa, Moraga, Mauricio, Acuña, Mónica, Berríos, Soledad, Llop, Elena, Valenzuela, Carlos Y., Bustamante, M. Leonor, Digman, Dayhana, Symon, Adriana, Asenjo, Soledad, López, Pamela, Blanco, Alejandro, Suazo, José, Barozet, Emmanuelle, Caba, Fresia, Villalón, Marcelo, Alvarado, Sergio, Cáceres, Dante, Salgado, Katherine, Portales, Pilar, Moreno-Estrada, Andrés, Gignoux, Christopher R., Sandoval, Karla, Bustamante, Carlos D., Eng, Celeste, Huntsman, Scott, Burchard, Esteban G., Loira, Nicolás, Maass, Alejandro, Cifuentes, Lucía
Publicado 2020

Construction of Reference Chromosome-Scale Pseudomolecules for Potato: Integrating the Potato Genome with Genetic and Physical Maps

por Sharma, Sanjeev Kumar, Bolser, Daniel, de Boer, Jan, Sønderkær, Mads, Amoros, Walter, Carboni, Martin Federico, D’Ambrosio, Juan Martín, de la Cruz, German, Di Genova, Alex, Douches, David S., Eguiluz, Maria, Guo, Xiao, Guzman, Frank, Hackett, Christine A., Hamilton, John P., Li, Guangcun, Li, Ying, Lozano, Roberto, Maass, Alejandro, Marshall, David, Martinez, Diana, McLean, Karen, Mejía, Nilo, Milne, Linda, Munive, Susan, Nagy, Istvan, Ponce, Olga, Ramirez, Manuel, Simon, Reinhard, Thomson, Susan J., Torres, Yerisf, Waugh, Robbie, Zhang, Zhonghua, Huang, Sanwen, Visser, Richard G. F., Bachem, Christian W. B., Sagredo, Boris, Feingold, Sergio E., Orjeda, Gisella, Veilleux, Richard E., Bonierbale, Merideth, Jacobs, Jeanne M. E., Milbourne, Dan, Martin, David Michael Alan, Bryan, Glenn J.
Publicado 2013

The Atlantic salmon genome provides insights into rediploidization

por Lien, Sigbjørn, Koop, Ben F., Sandve, Simen R., Miller, Jason R., Kent, Matthew P., Nome, Torfinn, Hvidsten, Torgeir R., Leong, Jong S., Minkley, David R., Zimin, Aleksey, Grammes, Fabian, Grove, Harald, Gjuvsland, Arne, Walenz, Brian, Hermansen, Russell A., von Schalburg, Kris, Rondeau, Eric B., Di Genova, Alex, Samy, Jeevan K. A., Olav Vik, Jon, Vigeland, Magnus D., Caler, Lis, Grimholt, Unni, Jentoft, Sissel, Inge Våge, Dag, de Jong, Pieter, Moen, Thomas, Baranski, Matthew, Palti, Yniv, Smith, Douglas R., Yorke, James A., Nederbragt, Alexander J., Tooming-Klunderud, Ave, Jakobsen, Kjetill S., Jiang, Xuanting, Fan, Dingding, Hu, Yan, Liberles, David A., Vidal, Rodrigo, Iturra, Patricia, Jones, Steven J. M., Jonassen, Inge, Maass, Alejandro, Omholt, Stig W., Davidson, William S.
Publicado 2016

The transposable element-rich genome of the cereal pest Sitophilus oryzae

por Parisot, Nicolas, Vargas-Chávez, Carlos, Goubert, Clément, Baa-Puyoulet, Patrice, Balmand, Séverine, Beranger, Louis, Blanc, Caroline, Bonnamour, Aymeric, Boulesteix, Matthieu, Burlet, Nelly, Calevro, Federica, Callaerts, Patrick, Chancy, Théo, Charles, Hubert, Colella, Stefano, Da Silva Barbosa, André, Dell’Aglio, Elisa, Di Genova, Alex, Febvay, Gérard, Gabaldón, Toni, Galvão Ferrarini, Mariana, Gerber, Alexandra, Gillet, Benjamin, Hubley, Robert, Hughes, Sandrine, Jacquin-Joly, Emmanuelle, Maire, Justin, Marcet-Houben, Marina, Masson, Florent, Meslin, Camille, Montagné, Nicolas, Moya, Andrés, Ribeiro de Vasconcelos, Ana Tereza, Richard, Gautier, Rosen, Jeb, Sagot, Marie-France, Smit, Arian F. A., Storer, Jessica M., Vincent-Monegat, Carole, Vallier, Agnès, Vigneron, Aurélien, Zaidman-Rémy, Anna, Zamoum, Waël, Vieira, Cristina, Rebollo, Rita, Latorre, Amparo, Heddi, Abdelaziz
Publicado 2021

Multiomic analysis of malignant pleural mesothelioma identifies molecular axes and specialized tumor profiles driving intertumor heterogeneity

por Mangiante, Lise, Alcala, Nicolas, Sexton-Oates, Alexandra, Di Genova, Alex, Gonzalez-Perez, Abel, Khandekar, Azhar, Bergstrom, Erik N., Kim, Jaehee, Liu, Xiran, Blazquez-Encinas, Ricardo, Giacobi, Colin, Le Stang, Nolwenn, Boyault, Sandrine, Cuenin, Cyrille, Tabone-Eglinger, Severine, Damiola, Francesca, Voegele, Catherine, Ardin, Maude, Michallet, Marie-Cecile, Soudade, Lorraine, Delhomme, Tiffany M., Poret, Arnaud, Brevet, Marie, Copin, Marie-Christine, Giusiano-Courcambeck, Sophie, Damotte, Diane, Girard, Cecile, Hofman, Veronique, Hofman, Paul, Mouroux, Jérôme, Cohen, Charlotte, Lacomme, Stephanie, Mazieres, Julien, de Montpreville, Vincent Thomas, Perrin, Corinne, Planchard, Gaetane, Rousseau, Nathalie, Rouquette, Isabelle, Sagan, Christine, Scherpereel, Arnaud, Thivolet, Francoise, Vignaud, Jean-Michel, Jean, Didier, Ilg, Anabelle Gilg Soit, Olaso, Robert, Meyer, Vincent, Boland-Auge, Anne, Deleuze, Jean-Francois, Altmuller, Janine, Nuernberg, Peter, Ibáñez-Costa, Alejandro, Castaño, Justo P., Lantuejoul, Sylvie, Ghantous, Akram, Maussion, Charles, Courtiol, Pierre, Hernandez-Vargas, Hector, Caux, Christophe, Girard, Nicolas, Lopez-Bigas, Nuria, Alexandrov, Ludmil B., Galateau-Salle, Françoise, Foll, Matthieu, Fernandez-Cuesta, Lynnette
Publicado 2023