AnnotatorJ: an ImageJ plugin to ease hand annotation of cellular compartments

por Hollandi, Réka, Diósdi, Ákos, Hollandi, Gábor, Moshkov, Nikita, Horváth, Péter
Publicado 2020

3D-Cell-Annotator: an open-source active surface tool for single-cell segmentation in 3D microscopy images

por Tasnadi, Ervin A, Toth, Timea, Kovacs, Maria, Diosdi, Akos, Pampaloni, Francesco, Molnar, Jozsef, Piccinini, Filippo, Horvath, Peter
Publicado 2020

Software tools for 3D nuclei segmentation and quantitative analysis in multicellular aggregates

por Piccinini, Filippo, Balassa, Tamas, Carbonaro, Antonella, Diosdi, Akos, Toth, Timea, Moshkov, Nikita, Tasnadi, Ervin A., Horvath, Peter
Publicado 2020

A quantitative metric for the comparative evaluation of optical clearing protocols for 3D multicellular spheroids

por Diosdi, Akos, Hirling, Dominik, Kovacs, Maria, Toth, Timea, Harmati, Maria, Koos, Krisztian, Buzas, Krisztina, Piccinini, Filippo, Horvath, Peter
Publicado 2021

Cell lines and clearing approaches: a single-cell level 3D light-sheet fluorescence microscopy dataset of multicellular spheroids

por Diosdi, Akos, Hirling, Dominik, Kovacs, Maria, Toth, Timea, Harmati, Maria, Koos, Krisztian, Buzas, Krisztina, Piccinini, Filippo, Horvath, Peter
Publicado 2021

SpheroidPicker for automated 3D cell culture manipulation using deep learning

por Grexa, Istvan, Diosdi, Akos, Harmati, Maria, Kriston, Andras, Moshkov, Nikita, Buzas, Krisztina, Pietiäinen, Vilja, Koos, Krisztian, Horvath, Peter
Publicado 2021

Image-based and machine learning-guided multiplexed serology test for SARS-CoV-2

por Pietiäinen, Vilja, Polso, Minttu, Migh, Ede, Guckelsberger, Christian, Harmati, Maria, Diosdi, Akos, Turunen, Laura, Hassinen, Antti, Potdar, Swapnil, Koponen, Annika, Sebestyen, Edina Gyukity, Kovacs, Ferenc, Kriston, Andras, Hollandi, Reka, Burian, Katalin, Terhes, Gabriella, Visnyovszki, Adam, Fodor, Eszter, Lacza, Zsombor, Kantele, Anu, Kolehmainen, Pekka, Kakkola, Laura, Strandin, Tomas, Levanov, Lev, Kallioniemi, Olli, Kemeny, Lajos, Julkunen, Ilkka, Vapalahti, Olli, Buzas, Krisztina, Paavolainen, Lassi, Horvath, Peter, Hepojoki, Jussi
Publicado 2023

MISpheroID: a knowledgebase and transparency tool for minimum information in spheroid identity

por Peirsman, Arne, Blondeel, Eva, Ahmed, Tasdiq, Anckaert, Jasper, Audenaert, Dominique, Boterberg, Tom, Buzas, Krisztina, Carragher, Neil, Castellani, Gastone, Castro, Flávia, Dangles-Marie, Virginie, Dawson, John, De Tullio, Pascal, De Vlieghere, Elly, Dedeyne, Sándor, Depypere, Herman, Diosdi, Akos, Dmitriev, Ruslan I., Dolznig, Helmut, Fischer, Suzanne, Gespach, Christian, Goossens, Vera, Heino, Jyrki, Hendrix, An, Horvath, Peter, Kunz-Schughart, Leoni A., Maes, Sebastiaan, Mangodt, Christophe, Mestdagh, Pieter, Michlíková, Soňa, Oliveira, Maria José, Pampaloni, Francesco, Piccinini, Filippo, Pinheiro, Cláudio, Rahn, Jennifer, Robbins, Stephen M., Siljamäki, Elina, Steigemann, Patrick, Sys, Gwen, Takayama, Shuichi, Tesei, Anna, Tulkens, Joeri, Van Waeyenberge, Michiel, Vandesompele, Jo, Wagemans, Glenn, Weindorfer, Claudia, Yigit, Nurten, Zablowsky, Nina, Zanoni, Michele, Blondeel, Phillip, De Wever, Olivier
Publicado 2021