Advances in Rosetta structure prediction for difficult molecular-replacement problems

por DiMaio, Frank
Publicado 2013

Efficient consideration of coordinated water molecules improves computational protein-protein and protein-ligand docking discrimination

por Pavlovicz, Ryan E., Park, Hahnbeom, DiMaio, Frank
Publicado 2020

The HCN Channel Voltage Sensor Undergoes A Large Downward Motion During Hyperpolarization

por Dai, Gucan, Aman, Teresa K., DiMaio, Frank, Zagotta, William N.
Publicado 2019

Electromechanical coupling mechanism for activation and inactivation of an HCN channel

por Dai, Gucan, Aman, Teresa K., DiMaio, Frank, Zagotta, William N.
Publicado 2021

Automatic and accurate ligand structure determination guided by cryo-electron microscopy maps

por Muenks, Andrew, Zepeda, Samantha, Zhou, Guangfeng, Veesler, David, DiMaio, Frank
Publicado 2023

Modeling Symmetric Macromolecular Structures in Rosetta3

por DiMaio, Frank, Leaver-Fay, Andrew, Bradley, Phil, Baker, David, André, Ingemar
Publicado 2011

Anti-diabetic drug binding site in a mammalian K(ATP) channel revealed by Cryo-EM

por Martin, Gregory M, Kandasamy, Balamurugan, DiMaio, Frank, Yoshioka, Craig, Shyng, Show-Ling
Publicado 2017

RosettaES: a sampling strategy enabling automated interpretation of difficult cryo-EM maps

por Frenz, Brandon, Walls, Alexandra C, Egelman, Edward H, Veesler, David, DiMaio, Frank
Publicado 2017

Prediction of Protein Mutational Free Energy: Benchmark and Sampling Improvements Increase Classification Accuracy

por Frenz, Brandon, Lewis, Steven M., King, Indigo, DiMaio, Frank, Park, Hahnbeom, Song, Yifan
Publicado 2020

Phase separation of Polo-like kinase 4 by autoactivation and clustering drives centriole biogenesis

por Park, Jung-Eun, Zhang, Liang, Bang, Jeong Kyu, Andresson, Thorkell, DiMaio, Frank, Lee, Kyung S.
Publicado 2019

Automated structure refinement of macromolecular assemblies from cryo-EM maps using Rosetta

por Wang, Ray Yu-Ruei, Song, Yifan, Barad, Benjamin A, Cheng, Yifan, Fraser, James S, DiMaio, Frank
Publicado 2016

Structure of the type VI secretion system TssK–TssF–TssG baseplate subcomplex revealed by cryo-electron microscopy

por Park, Young-Jun, Lacourse, Kaitlyn D., Cambillau, Christian, DiMaio, Frank, Mougous, Joseph D., Veesler, David
Publicado 2018

Cryo‐electron Microscopy Imaging of Alzheimer's Amyloid‐beta 42 Oligomer Displayed on a Functionally and Structurally Relevant Scaffold

por Wu, Jinming, Blum, Thorsten B., Farrell, Daniel P, DiMaio, Frank, Abrahams, Jan Pieter, Luo, Jinghui
Publicado 2021

Crystal structure of XMRV protease differs from the structures of other retropepsins

por Li, Mi, DiMaio, Frank, Zhou, Dongwen, Gustchina, Alla, Lubkowski, Jacek, Dauter, Zbigniew, Baker, David, Wlodawer, Alexander
Publicado 2011

Deep learning enables the atomic structure determination of the Fanconi Anemia core complex from cryoEM

por Farrell, Daniel P., Anishchenko, Ivan, Shakeel, Shabih, Lauko, Anna, Passmore, Lori A., Baker, David, DiMaio, Frank
Publicado 2020

The Molecular Basis for Flexibility in the Flexible Filamentous Plant Viruses

por DiMaio, Frank, Chen, Chun-Chieh, Yu, Xiong, Frenz, Brandon, Hsu, Yau-Heiu, Lin, Na-Sheng, Egelman, Edward H.
Publicado 2015

EMRinger: Side-chain-directed model and map validation for 3D Electron Cryomicroscopy

por Barad, Benjamin A, Echols, Nathaniel, Wang, Ray Yu-Ruei, Cheng, Yifan, DiMaio, Frank, Adams, Paul D, Fraser, James S
Publicado 2015

Model for a novel membrane envelope in a filamentous hyperthermophilic virus

por Kasson, Peter, DiMaio, Frank, Yu, Xiong, Lucas-Staat, Soizick, Krupovic, Mart, Schouten, Stefan, Prangishvili, David, Egelman, Edward H
Publicado 2017

Cryo-EM structures of CTP synthase filaments reveal mechanism of pH-sensitive assembly during budding yeast starvation

por Hansen, Jesse M, Horowitz, Avital, Lynch, Eric M, Farrell, Daniel P, Quispe, Joel, DiMaio, Frank, Kollman, Justin M
Publicado 2021

De novo protein structure determination from near-atomic resolution cryo-EM maps

por Wang, Ray Yu-Ruei, Kudryashev, Mikhail, Li, Xueming, Egelman, Edward H., Basler, Marek, Cheng, Yifan, Baker, David, DiMaio, Frank
Publicado 2015