Grounding annotations in published literature with an emphasis on the functional roles used in metabolic models

por Binter, Erik, Binter, Scott, Disz, Terry, Kalmanek, Elizabeth, Powers, Alexander, Pusch, Gordon D., Turgeon, Julie
Publicado 2011

Real Time Metagenomics: Using k-mers to annotate metagenomes

por Edwards, Robert A., Olson, Robert, Disz, Terry, Pusch, Gordon D., Vonstein, Veronika, Stevens, Rick, Overbeek, Ross
Publicado 2012

Accessing the SEED Genome Databases via Web Services API: Tools for Programmers

por Disz, Terry, Akhter, Sajia, Cuevas, Daniel, Olson, Robert, Overbeek, Ross, Vonstein, Veronika, Stevens, Rick, Edwards, Robert A
Publicado 2010

The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST)

por Overbeek, Ross, Olson, Robert, Pusch, Gordon D., Olsen, Gary J., Davis, James J., Disz, Terry, Edwards, Robert A., Gerdes, Svetlana, Parrello, Bruce, Shukla, Maulik, Vonstein, Veronika, Wattam, Alice R., Xia, Fangfang, Stevens, Rick
Publicado 2014

RASTtk: A modular and extensible implementation of the RAST algorithm for building custom annotation pipelines and annotating batches of genomes

por Brettin, Thomas, Davis, James J., Disz, Terry, Edwards, Robert A., Gerdes, Svetlana, Olsen, Gary J., Olson, Robert, Overbeek, Ross, Parrello, Bruce, Pusch, Gordon D., Shukla, Maulik, Thomason, James A., Stevens, Rick, Vonstein, Veronika, Wattam, Alice R., Xia, Fangfang
Publicado 2015

The National Microbial Pathogen Database Resource (NMPDR): a genomics platform based on subsystem annotation

por McNeil, Leslie Klis, Reich, Claudia, Aziz, Ramy K., Bartels, Daniela, Cohoon, Matthew, Disz, Terry, Edwards, Robert A., Gerdes, Svetlana, Hwang, Kaitlyn, Kubal, Michael, Margaryan, Gohar Rem, Meyer, Folker, Mihalo, William, Olsen, Gary J., Olson, Robert, Osterman, Andrei, Paarmann, Daniel, Paczian, Tobias, Parrello, Bruce, Pusch, Gordon D., Rodionov, Dmitry A., Shi, Xinghua, Vassieva, Olga, Vonstein, Veronika, Zagnitko, Olga, Xia, Fangfang, Zinner, Jenifer, Overbeek, Ross, Stevens, Rick
Publicado 2007

PATRIC, the bacterial bioinformatics database and analysis resource

por Wattam, Alice R., Abraham, David, Dalay, Oral, Disz, Terry L., Driscoll, Timothy, Gabbard, Joseph L., Gillespie, Joseph J., Gough, Roger, Hix, Deborah, Kenyon, Ronald, Machi, Dustin, Mao, Chunhong, Nordberg, Eric K., Olson, Robert, Overbeek, Ross, Pusch, Gordon D., Shukla, Maulik, Schulman, Julie, Stevens, Rick L., Sullivan, Daniel E., Vonstein, Veronika, Warren, Andrew, Will, Rebecca, Wilson, Meredith J.C., Yoo, Hyun Seung, Zhang, Chengdong, Zhang, Yan, Sobral, Bruno W.
Publicado 2014

Improvements to PATRIC, the all-bacterial Bioinformatics Database and Analysis Resource Center

por Wattam, Alice R., Davis, James J., Assaf, Rida, Boisvert, Sébastien, Brettin, Thomas, Bun, Christopher, Conrad, Neal, Dietrich, Emily M., Disz, Terry, Gabbard, Joseph L., Gerdes, Svetlana, Henry, Christopher S., Kenyon, Ronald W., Machi, Dustin, Mao, Chunhong, Nordberg, Eric K., Olsen, Gary J., Murphy-Olson, Daniel E., Olson, Robert, Overbeek, Ross, Parrello, Bruce, Pusch, Gordon D., Shukla, Maulik, Vonstein, Veronika, Warren, Andrew, Xia, Fangfang, Yoo, Hyunseung, Stevens, Rick L.
Publicado 2017

PATRIC as a unique resource for studying antimicrobial resistance

por Antonopoulos, Dionysios A, Assaf, Rida, Aziz, Ramy Karam, Brettin, Thomas, Bun, Christopher, Conrad, Neal, Davis, James J, Dietrich, Emily M, Disz, Terry, Gerdes, Svetlana, Kenyon, Ronald W, Machi, Dustin, Mao, Chunhong, Murphy-Olson, Daniel E, Nordberg, Eric K, Olsen, Gary J, Olson, Robert, Overbeek, Ross, Parrello, Bruce, Pusch, Gordon D, Santerre, John, Shukla, Maulik, Stevens, Rick L, VanOeffelen, Margo, Vonstein, Veronika, Warren, Andrew S, Wattam, Alice R, Xia, Fangfang, Yoo, Hyunseung
Publicado 2017

The Subsystems Approach to Genome Annotation and its Use in the Project to Annotate 1000 Genomes

por Overbeek, Ross, Begley, Tadhg, Butler, Ralph M., Choudhuri, Jomuna V., Chuang, Han-Yu, Cohoon, Matthew, de Crécy-Lagard, Valérie, Diaz, Naryttza, Disz, Terry, Edwards, Robert, Fonstein, Michael, Frank, Ed D., Gerdes, Svetlana, Glass, Elizabeth M., Goesmann, Alexander, Hanson, Andrew, Iwata-Reuyl, Dirk, Jensen, Roy, Jamshidi, Neema, Krause, Lutz, Kubal, Michael, Larsen, Niels, Linke, Burkhard, McHardy, Alice C., Meyer, Folker, Neuweger, Heiko, Olsen, Gary, Olson, Robert, Osterman, Andrei, Portnoy, Vasiliy, Pusch, Gordon D., Rodionov, Dmitry A., Rückert, Christian, Steiner, Jason, Stevens, Rick, Thiele, Ines, Vassieva, Olga, Ye, Yuzhen, Zagnitko, Olga, Vonstein, Veronika
Publicado 2005