Echidna: integrated simulations of single-cell immune receptor repertoires and transcriptomes

por Han, Jiami, Masserey, Solène, Shlesinger, Danielle, Kuhn, Raphael, Papadopoulou, Chrysa, Agrafiotis, Andreas, Kreiner, Victor, Dizerens, Raphael, Hong, Kai-Lin, Weber, Cédric, Greiff, Victor, Oxenius, Annette, Reddy, Sai T, Yermanos, Alexander
Publicado 2022

Single-cell immune repertoire sequencing of B and T cells in murine models of infection and autoimmunity

por Shlesinger, Danielle, Hong, Kai-Lin, Shammas, Ghazal, Page, Nicolas, Sandu, Ioana, Agrafiotis, Andreas, Kreiner, Victor, Fonta, Nicolas, Vincenti, Ilena, Wagner, Ingrid, Piccinno, Margot, Mariotte, Alexandre, Klimek, Bogna, Dizerens, Raphael, Manero-Carranza, Marcos, Kuhn, Raphael, Ehling, Roy, Frei, Lester, Khodaverdi, Keywan, Panetti, Camilla, Joller, Nicole, Oxenius, Annette, Merkler, Doron, Reddy, Sai T., Yermanos, Alexander
Publicado 2022

Persistent virus-specific and clonally expanded antibody-secreting cells respond to induced self-antigen in the CNS

por Agrafiotis, Andreas, Dizerens, Raphael, Vincenti, Ilena, Wagner, Ingrid, Kuhn, Raphael, Shlesinger, Danielle, Manero-Carranza, Marcos, Cotet, Tudor-Stefan, Hong, Kai-Lin, Page, Nicolas, Fonta, Nicolas, Shammas, Ghazal, Mariotte, Alexandre, Piccinno, Margot, Kreutzfeldt, Mario, Gruntz, Benedikt, Ehling, Roy, Genovese, Alessandro, Pedrioli, Alessandro, Dounas, Andreas, Franzenburg, Sören, Tumani, Hayrettin, Kümpfel, Tania, Kavaka, Vladyslav, Gerdes, Lisa Ann, Dornmair, Klaus, Beltrán, Eduardo, Oxenius, Annette, Reddy, Sai T., Merkler, Doron, Yermanos, Alexander
Publicado 2023

ePlatypus: an ecosystem for computational analysis of immunogenomics data

por Cotet, Tudor-Stefan, Agrafiotis, Andreas, Kreiner, Victor, Kuhn, Raphael, Shlesinger, Danielle, Manero-Carranza, Marcos, Khodaverdi, Keywan, Kladis, Evgenios, Desideri Perea, Aurora, Maassen-Veeters, Dylan, Glänzer, Wiona, Massery, Solène, Guerci, Lorenzo, Hong, Kai-Lin, Han, Jiami, Stiklioraitis, Kostas, D’Arcy, Vittoria Martinolli, Dizerens, Raphael, Kilchenmann, Samuel, Stalder, Lucas, Nissen, Leon, Vogelsanger, Basil, Anzböck, Stine, Laslo, Daria, Bakker, Sophie, Kondorosy, Melinda, Venerito, Marco, Sanz García, Alejandro, Feller, Isabelle, Oxenius, Annette, Reddy, Sai T, Yermanos, Alexander
Publicado 2023