Compacting and correcting Trinity and Oases RNA-Seq de novo assemblies

por Cabau, Cédric, Escudié, Frédéric, Djari, Anis, Guiguen, Yann, Bobe, Julien, Klopp, Christophe
Publicado 2017

Gene-based single nucleotide polymorphism discovery in bovine muscle using next-generation transcriptomic sequencing

por Djari, Anis, Esquerré, Diane, Weiss, Bernard, Martins, Frédéric, Meersseman, Cédric, Boussaha, Mekki, Klopp, Christophe, Rocha, Dominique
Publicado 2013

RNAbrowse: RNA-Seq De Novo Assembly Results Browser

por Mariette, Jérôme, Noirot, Céline, Nabihoudine, Ibounyamine, Bardou, Philippe, Hoede, Claire, Djari, Anis, Cabau, Cédric, Klopp, Christophe
Publicado 2014

Re-Sequencing Data for Refining Candidate Genes and Polymorphisms in QTL Regions Affecting Adiposity in Chicken

por Roux, Pierre-François, Boutin, Morgane, Désert, Colette, Djari, Anis, Esquerré, Diane, Klopp, Christophe, Lagarrigue, Sandrine, Demeure, Olivier
Publicado 2014

Identification of large intergenic non-coding RNAs in bovine muscle using next-generation transcriptomic sequencing

por Billerey, Coline, Boussaha, Mekki, Esquerré, Diane, Rebours, Emmanuelle, Djari, Anis, Meersseman, Cédric, Klopp, Christophe, Gautheret, Daniel, Rocha, Dominique
Publicado 2014

Histone posttranslational modifications rather than DNA methylation underlie gene reprogramming in pollination‐dependent and pollination‐independent fruit set in tomato

por Hu, Guojian, Huang, Baowen, Wang, Keke, Frasse, Pierre, Maza, Elie, Djari, Anis, Benhamed, Moussa, Gallusci, Philippe, Li, Zhengguo, Zouine, Mohamed, Bouzayen, Mondher
Publicado 2020

Genome-Wide Characterization of RNA Editing in Chicken Embryos Reveals Common Features among Vertebrates

por Frésard, Laure, Leroux, Sophie, Roux, Pierre-François, Klopp, Christophe, Fabre, Stéphane, Esquerré, Diane, Dehais, Patrice, Djari, Anis, Gourichon, David, Lagarrigue, Sandrine, Pitel, Frédérique
Publicado 2015

Selenium Biofortification Impacts the Tomato Fruit Metabolome and Transcriptional Profile at Ripening

por Shiriaev, Anton, Brizzolara, Stefano, Sorce, Carlo, Meoni, Gaia, Vergata, Chiara, Martinelli, Federico, Maza, Elie, Djari, Anis, Pirrello, Julien, Pezzarossa, Beatrice, Malorgio, Fernando, Tonutti, Pietro
Publicado 2023

Transition to ripening in tomato requires hormone-controlled genetic reprogramming initiated in gel tissue

por Chirinos, Ximena, Ying, Shiyu, Rodrigues, Maria Aurineide, Maza, Elie, Djari, Anis, Hu, Guojian, Liu, Mingchun, Purgatto, Eduardo, Fournier, Sylvie, Regad, Farid, Bouzayen, Mondher, Pirrello, Julien
Publicado 2022

Expanding Duplication of Free Fatty Acid Receptor-2 (GPR43) Genes in the Chicken Genome

por Meslin, Camille, Desert, Colette, Callebaut, Isabelle, Djari, Anis, Klopp, Christophe, Pitel, Frédérique, Leroux, Sophie, Martin, Pascal, Froment, Pascal, Guilbert, Edith, Gondret, Florence, Lagarrigue, Sandrine, Monget, Philippe
Publicado 2015

The Extent of mRNA Editing Is Limited in Chicken Liver and Adipose, but Impacted by Tissular Context, Genotype, Age, and Feeding as Exemplified with a Conserved Edited Site in COG3

por Roux, Pierre-François, Frésard, Laure, Boutin, Morgane, Leroux, Sophie, Klopp, Christophe, Djari, Anis, Esquerré, Diane, Martin, Pascal GP, Zerjal, Tatiana, Gourichon, David, Pitel, Frédérique, Lagarrigue, Sandrine
Publicado 2015

Detection of Haplotypes Associated with Prenatal Death in Dairy Cattle and Identification of Deleterious Mutations in GART, SHBG and SLC37A2

por Fritz, Sébastien, Capitan, Aurelien, Djari, Anis, Rodriguez, Sabrina C., Barbat, Anne, Baur, Aurélia, Grohs, Cécile, Weiss, Bernard, Boussaha, Mekki, Esquerré, Diane, Klopp, Christophe, Rocha, Dominique, Boichard, Didier
Publicado 2013

Interaction of two MADS-box genes leads to growth phenotype divergence of all-flesh type of tomatoes

por Huang, Baowen, Hu, Guojian, Wang, Keke, Frasse, Pierre, Maza, Elie, Djari, Anis, Deng, Wei, Pirrello, Julien, Burlat, Vincent, Pons, Clara, Granell, Antonio, Li, Zhengguo, van der Rest, Benoît, Bouzayen, Mondher
Publicado 2021

Genetic variability of the activity of bidirectional promoters: a pilot study in bovine muscle

por Meersseman, Cédric, Letaief, Rabia, Léjard, Véronique, Rebours, Emmanuelle, Guillocheau, Gabriel, Esquerré, Diane, Djari, Anis, Chamberlain, Amanda, Vander Jagt, Christy, Klopp, Christophe, Boussaha, Mekki, Renand, Gilles, Maftah, Abderrahman, Petit, Daniel, Rocha, Dominique
Publicado 2017

Genome-Wide Study of Structural Variants in Bovine Holstein, Montbéliarde and Normande Dairy Breeds

por Boussaha, Mekki, Esquerré, Diane, Barbieri, Johanna, Djari, Anis, Pinton, Alain, Letaief, Rabia, Salin, Gérald, Escudié, Frédéric, Roulet, Alain, Fritz, Sébastien, Samson, Franck, Grohs, Cécile, Bernard, Maria, Klopp, Christophe, Boichard, Didier, Rocha, Dominique
Publicado 2015

Cantaloupe melon genome reveals 3D chromatin features and structural relationship with the ancestral cucurbitaceae karyotype

por Pichot, Clement, Djari, Anis, Tran, Joseph, Verdenaud, Marion, Marande, William, Huneau, Cecile, Gautier, Veronique, Latrasse, David, Arribat, Sandrine, Sommard, Vivien, Troadec, Christelle, Poncet, Charles, Bendahmane, Mohammed, Szecsi, Judit, Dogimont, Catherine, Salse, Jerome, Benhamed, Moussa, Zouine, Mohamed, Boualem, Adnane, Bendahmane, Abdelhafid
Publicado 2021

Combined QTL and Selective Sweep Mappings with Coding SNP Annotation and cis-eQTL Analysis Revealed PARK2 and JAG2 as New Candidate Genes for Adiposity Regulation

por Roux, Pierre-François, Boitard, Simon, Blum, Yuna, Parks, Brian, Montagner, Alexandra, Mouisel, Etienne, Djari, Anis, Esquerré, Diane, Désert, Colette, Boutin, Morgane, Leroux, Sophie, Lecerf, Frédéric, Le Bihan-Duval, Elisabeth, Klopp, Christophe, Servin, Bertrand, Pitel, Frédérique, Duclos, Michel Jean, Guillou, Hervé, Lusis, Aldons J., Demeure, Olivier, Lagarrigue, Sandrine
Publicado 2015

Novel Insights into the Bovine Polled Phenotype and Horn Ontogenesis in Bovidae

por Allais-Bonnet, Aurélie, Grohs, Cécile, Medugorac, Ivica, Krebs, Stefan, Djari, Anis, Graf, Alexander, Fritz, Sébastien, Seichter, Doris, Baur, Aurélia, Russ, Ingolf, Bouet, Stéphan, Rothammer, Sophie, Wahlberg, Per, Esquerré, Diane, Hoze, Chris, Boussaha, Mekki, Weiss, Bernard, Thépot, Dominique, Fouilloux, Marie-Noëlle, Rossignol, Marie-Noëlle, van Marle-Köster, Este, Hreiðarsdóttir, Gunnfríður Elín, Barbey, Sarah, Dozias, Dominique, Cobo, Emilie, Reversé, Patrick, Catros, Olivier, Marchand, Jean-Luc, Soulas, Pascal, Roy, Pierre, Marquant-Leguienne, Brigitte, Le Bourhis, Daniel, Clément, Laetitia, Salas-Cortes, Laura, Venot, Eric, Pannetier, Maëlle, Phocas, Florence, Klopp, Christophe, Rocha, Dominique, Fouchet, Michel, Journaux, Laurent, Bernard-Capel, Carine, Ponsart, Claire, Eggen, André, Blum, Helmut, Gallard, Yves, Boichard, Didier, Pailhoux, Eric, Capitan, Aurélien
Publicado 2013

The BioMart community portal: an innovative alternative to large, centralized data repositories

por Smedley, Damian, Haider, Syed, Durinck, Steffen, Pandini, Luca, Provero, Paolo, Allen, James, Arnaiz, Olivier, Awedh, Mohammad Hamza, Baldock, Richard, Barbiera, Giulia, Bardou, Philippe, Beck, Tim, Blake, Andrew, Bonierbale, Merideth, Brookes, Anthony J., Bucci, Gabriele, Buetti, Iwan, Burge, Sarah, Cabau, Cédric, Carlson, Joseph W., Chelala, Claude, Chrysostomou, Charalambos, Cittaro, Davide, Collin, Olivier, Cordova, Raul, Cutts, Rosalind J., Dassi, Erik, Genova, Alex Di, Djari, Anis, Esposito, Anthony, Estrella, Heather, Eyras, Eduardo, Fernandez-Banet, Julio, Forbes, Simon, Free, Robert C., Fujisawa, Takatomo, Gadaleta, Emanuela, Garcia-Manteiga, Jose M., Goodstein, David, Gray, Kristian, Guerra-Assunção, José Afonso, Haggarty, Bernard, Han, Dong-Jin, Han, Byung Woo, Harris, Todd, Harshbarger, Jayson, Hastings, Robert K., Hayes, Richard D., Hoede, Claire, Hu, Shen, Hu, Zhi-Liang, Hutchins, Lucie, Kan, Zhengyan, Kawaji, Hideya, Keliet, Aminah, Kerhornou, Arnaud, Kim, Sunghoon, Kinsella, Rhoda, Klopp, Christophe, Kong, Lei, Lawson, Daniel, Lazarevic, Dejan, Lee, Ji-Hyun, Letellier, Thomas, Li, Chuan-Yun, Lio, Pietro, Liu, Chu-Jun, Luo, Jie, Maass, Alejandro, Mariette, Jerome, Maurel, Thomas, Merella, Stefania, Mohamed, Azza Mostafa, Moreews, Francois, Nabihoudine, Ibounyamine, Ndegwa, Nelson, Noirot, Céline, Perez-Llamas, Cristian, Primig, Michael, Quattrone, Alessandro, Quesneville, Hadi, Rambaldi, Davide, Reecy, James, Riba, Michela, Rosanoff, Steven, Saddiq, Amna Ali, Salas, Elisa, Sallou, Olivier, Shepherd, Rebecca, Simon, Reinhard, Sperling, Linda, Spooner, William, Staines, Daniel M., Steinbach, Delphine, Stone, Kevin, Stupka, Elia, Teague, Jon W., Dayem Ullah, Abu Z., Wang, Jun, Ware, Doreen, Wong-Erasmus, Marie, Youens-Clark, Ken, Zadissa, Amonida, Zhang, Shi-Jian, Kasprzyk, Arek
Publicado 2015