dictyBase 2013: integrating multiple Dictyostelid species

por Basu, Siddhartha, Fey, Petra, Pandit, Yogesh, Dodson, Robert, Kibbe, Warren A., Chisholm, Rex L.
Publicado 2013

Acidithiobacillus ferrooxidans metabolism: from genome sequence to industrial applications

por Valdés, Jorge, Pedroso, Inti, Quatrini, Raquel, Dodson, Robert J, Tettelin, Herve, Blake, Robert, Eisen, Jonathan A, Holmes, David S
Publicado 2008

CharProtDB: a database of experimentally characterized protein annotations

por Madupu, Ramana, Richter, Alexander, Dodson, Robert J., Brinkac, Lauren, Harkins, Derek, Durkin, Scott, Shrivastava, Susmita, Sutton, Granger, Haft, Daniel
Publicado 2012

dictyBase update 2011: web 2.0 functionality and the initial steps towards a genome portal for the Amoebozoa

por Gaudet, Pascale, Fey, Petra, Basu, Siddhartha, Bushmanova, Yulia A., Dodson, Robert, Sheppard, Kerry A., Just, Eric M., Kibbe, Warren A., Chisholm, Rex L.
Publicado 2011

Complete Genome Sequence of the Multiresistant Taxonomic Outlier Pseudomonas aeruginosa PA7

por Roy, Paul H., Tetu, Sasha G., Larouche, André, Elbourne, Liam, Tremblay, Simon, Ren, Qinghu, Dodson, Robert, Harkins, Derek, Shay, Ryan, Watkins, Kisha, Mahamoud, Yasmin, Paulsen, Ian T.
Publicado 2010

Text mining in the biocuration workflow: applications for literature curation at WormBase, dictyBase and TAIR

por Van Auken, Kimberly, Fey, Petra, Berardini, Tanya Z., Dodson, Robert, Cooper, Laurel, Li, Donghui, Chan, Juancarlos, Li, Yuling, Basu, Siddhartha, Muller, Hans-Michael, Chisholm, Rex, Huala, Eva, Sternberg, Paul W.
Publicado 2012

Life in Hot Carbon Monoxide: The Complete Genome Sequence of Carboxydothermus hydrogenoformans Z-2901

por Wu, Martin, Ren, Qinghu, Durkin, A. Scott, Daugherty, Sean C, Brinkac, Lauren M, Dodson, Robert J, Madupu, Ramana, Sullivan, Steven A, Kolonay, James F, Nelson, William C, Tallon, Luke J, Jones, Kristine M, Ulrich, Luke E, Gonzalez, Juan M, Zhulin, Igor B, Robb, Frank T, Eisen, Jonathan A
Publicado 2005

Complete Genome Sequence of the N(2)-Fixing Broad Host Range Endophyte Klebsiella pneumoniae 342 and Virulence Predictions Verified in Mice

por Fouts, Derrick E., Tyler, Heather L., DeBoy, Robert T., Daugherty, Sean, Ren, Qinghu, Badger, Jonathan H., Durkin, Anthony S., Huot, Heather, Shrivastava, Susmita, Kothari, Sagar, Dodson, Robert J., Mohamoud, Yasmin, Khouri, Hoda, Roesch, Luiz F. W., Krogfelt, Karen A., Struve, Carsten, Triplett, Eric W., Methé, Barbara A.
Publicado 2008

Correction: Life in Hot Carbon Monoxide: The Complete Genome Sequence of Carboxydothermus hydrogenoformans Z-2901

por Wu, Martin, Ren, Qinghu, Durkin, A. Scott, Daugherty, Sean C, Brinkac, Lauren M, Dodson, Robert J, Madupu, Ramana, Sullivan, Steven A, Kolonay, James F, Haft, Daniel H, Nelson, William C, Tallon, Luke J, Jones, Kristine M, Ulrich, Luke E, Gonzalez, Juan M, Zhulin, Igor B, Robb, Frank T, Eisen, Jonathan A
Publicado 2006

Major Structural Differences and Novel Potential Virulence Mechanisms from the Genomes of Multiple Campylobacter Species

por Fouts, Derrick E, Mongodin, Emmanuel F, Mandrell, Robert E, Miller, William G, Rasko, David A, Ravel, Jacques, Brinkac, Lauren M, DeBoy, Robert T, Parker, Craig T, Daugherty, Sean C, Dodson, Robert J, Durkin, A. Scott, Madupu, Ramana, Sullivan, Steven A, Shetty, Jyoti U, Ayodeji, Mobolanle A, Shvartsbeyn, Alla, Schatz, Michael C, Badger, Jonathan H, Fraser, Claire M, Nelson, Karen E
Publicado 2005

Pathema: a clade-specific bioinformatics resource center for pathogen research

por Brinkac, Lauren M., Davidsen, Tanja, Beck, Erin, Ganapathy, Anuradha, Caler, Elisabet, Dodson, Robert J., Durkin, A. Scott, Harkins, Derek M., Lorenzi, Hernan, Madupu, Ramana, Sebastian, Yinong, Shrivastava, Susmita, Thiagarajan, Mathangi, Orvis, Joshua, Sundaram, Jaideep P., Crabtree, Jonathon, Galens, Kevin, Zhao, Yongmei, Inman, Jason M., Montgomery, Robert, Schobel, Seth, Galinsky, Kevin, Tanenbaum, David M., Resnick, Adam, Zafar, Nikhat, White, Owen, Sutton, Granger
Publicado 2010

Complete genome sequence of the plant commensal Pseudomonas fluorescens Pf-5

por Paulsen, Ian T, Press, Caroline M, Ravel, Jacques, Kobayashi, Donald Y, Myers, Garry S A, Mavrodi, Dmitri V, DeBoy, Robert T, Seshadri, Rekha, Ren, Qinghu, Madupu, Ramana, Dodson, Robert J, Durkin, A Scott, Brinkac, Lauren M, Daugherty, Sean C, Sullivan, Stephen A, Rosovitz, Mary J, Gwinn, Michelle L, Zhou, Liwei, Schneider, Davd J, Cartinhour, Samuel W, Nelson, William C, Weidman, Janice, Watkins, Kisha, Tran, Kevin, Khouri, Hoda, Pierson, Elizabeth A, Pierson, Leland S, Thomashow, Linda S, Loper, Joyce E
Publicado 2005

DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae

por Heidelberg, John F., Eisen, Jonathan A., Nelson, William C., Clayton, Rebecca A., Gwinn, Michelle L., Dodson, Robert J., Haft, Daniel H., Hickey, Erin K., Peterson, Jeremy D., Umayam, Lowell, Gill, Steven R., Nelson, Karen E., Read, Timothy D., Tettelin, Hervé, Richardson, Delwood, Ermolaeva, Maria D., Vamathevan, Jessica, Bass, Steven, Qin, Haiying, Dragoi, Ioana, Sellers, Patrick, McDonald, Lisa, Utterback, Teresa, Fleishmann, Robert D., Nierman, William C., White, Owen, Salzberg, Steven L., Smith, Hamilton O., Colwell, Rita R., Mekalanos, John J., Venter, J. Craig, Fraser, Claire M.
Publicado 2000

Comparative Genomics of Emerging Human Ehrlichiosis Agents

por Dunning Hotopp, Julie C., Lin, Mingqun, Madupu, Ramana, Crabtree, Jonathan, Angiuoli, Samuel V, Eisen, Jonathan, Seshadri, Rekha, Ren, Qinghu, Wu, Martin, Utterback, Teresa R, Smith, Shannon, Lewis, Matthew, Khouri, Hoda, Zhang, Chunbin, Niu, Hua, Lin, Quan, Ohashi, Norio, Zhi, Ning, Nelson, William, Brinkac, Lauren M, Dodson, Robert J, Rosovitz, M. J, Sundaram, Jaideep, Daugherty, Sean C, Davidsen, Tanja, Durkin, Anthony S, Gwinn, Michelle, Haft, Daniel H, Selengut, Jeremy D, Sullivan, Steven A, Zafar, Nikhat, Zhou, Liwei, Benahmed, Faiza, Forberger, Heather, Halpin, Rebecca, Mulligan, Stephanie, Robinson, Jeffrey, White, Owen, Rikihisa, Yasuko, Tettelin, Hervé
Publicado 2006

Correction: Comparative Genomics of Emerging Human Ehrlichiosis Agents

por Dunning Hotopp, Julie C, Lin, Mingqun, Madupu, Ramana, Crabtree, Jonathan, Angiuoli, Samuel V, Eisen, Jonathan A, Seshadri, Rekha, Ren, Qinghu, Wu, Martin, Utterback, Teresa R, Smith, Shannon, Lewis, Matthew, Khouri, Hoda, Zhang, Chunbin, Niu, Hua, Lin, Quan, Ohashi, Norio, Zhi, Ning, Nelson, William, Brinkac, Lauren M, Dodson, Robert J, Rosovitz, M. J, Sundaram, Jaideep, Daugherty, Sean C, Davidsen, Tanja, Durkin, Anthony S, Gwinn, Michelle, Haft, Daniel H, Selengut, Jeremy D, Sullivan, Steven A, Zafar, Nikhat, Zhou, Liwei, Benahmed, Faiza, Forberger, Heather, Halpin, Rebecca, Mulligan, Stephanie, Robinson, Jeffrey, White, Owen, Rikihisa, Yasuko, Tettelin, Hervé
Publicado 2006

Genomic Insights into Methanotrophy: The Complete Genome Sequence of Methylococcus capsulatus (Bath)

por Ward, Naomi, Larsen, Øivind, Sakwa, James, Bruseth, Live, Khouri, Hoda, Durkin, A. Scott, Dimitrov, George, Jiang, Lingxia, Scanlan, David, Kang, Katherine H, Lewis, Matt, Nelson, Karen E, Methé, Barbara, Wu, Martin, Heidelberg, John F, Paulsen, Ian T, Fouts, Derrick, Ravel, Jacques, Tettelin, Hervé, Ren, Qinghu, Read, Tim, DeBoy, Robert T, Seshadri, Rekha, Salzberg, Steven L, Jensen, Harald B, Birkeland, Nils Kåre, Nelson, William C, Dodson, Robert J, Grindhaug, Svenn H, Holt, Ingeborg, Eidhammer, Ingvar, Jonasen, Inge, Vanaken, Susan, Utterback, Terry, Feldblyum, Tamara V, Fraser, Claire M, Lillehaug, Johan R, Eisen, Jonathan A
Publicado 2004

An overview of the BioCreative 2012 Workshop Track III: interactive text mining task

por Arighi, Cecilia N., Carterette, Ben, Cohen, K. Bretonnel, Krallinger, Martin, Wilbur, W. John, Fey, Petra, Dodson, Robert, Cooper, Laurel, Van Slyke, Ceri E., Dahdul, Wasila, Mabee, Paula, Li, Donghui, Harris, Bethany, Gillespie, Marc, Jimenez, Silvia, Roberts, Phoebe, Matthews, Lisa, Becker, Kevin, Drabkin, Harold, Bello, Susan, Licata, Luana, Chatr-aryamontri, Andrew, Schaeffer, Mary L., Park, Julie, Haendel, Melissa, Van Auken, Kimberly, Li, Yuling, Chan, Juancarlos, Muller, Hans-Michael, Cui, Hong, Balhoff, James P., Chi-Yang Wu, Johnny, Lu, Zhiyong, Wei, Chih-Hsuan, Tudor, Catalina O., Raja, Kalpana, Subramani, Suresh, Natarajan, Jeyakumar, Cejuela, Juan Miguel, Dubey, Pratibha, Wu, Cathy
Publicado 2013

Erratum: The complete genome sequence of the hyperthermophilic, sulphate-reducing archaeon Archaeoglobus fulgidus

por Klenk, Hans-Peter, Clayton, Rebecca A., Tomb, Jean-Francois, White, Owen, Nelson, Karen E., Ketchum, Karen A., Dodson, Robert J., Gwinn, Michelle, Hickey, Erin K., Peterson, Jeremy D., Richardson, Delwood L., Kerlavage, Anthony R., Graham, David E., Kyrpides, Nikos C., Fleischmann, Robert D., Quackenbush, John, Lee, Norman H., Sutton, Granger G., Gill, Steven, Kirkness, Ewen F., Dougherty, Brian A., McKenney, Keith, Adams, Mark D., Loftus, Brendan, Peterson, Scott, Reich, Claudia I., McNeil, Leslie K., Badger, Jonathan H., Glodek, Anna, Zhou, Lixin, Overbeek, Ross, Gocayne, Jeannine D., Weidman, Janice F., McDonald, Lisa, Utterback, Teresa, Cotton, Matthew D., Spriggs, Tracy, Artiach, Patricia, Kaine, Brian P., Sykes, Sean M., Sadow, Paul W., D'Andrea, Kurt P., Bowman, Cheryl, Fujii, Claire, Garland, Stacey A., Mason, Tanya M., Olsen, Gary J., Fraser, Claire M., Smith, Hamilton O., Woese, Carl R., Venter, J. Craig
Publicado 1998