Pyrosequencing Reveals High-Temperature Cellulolytic Microbial Consortia in Great Boiling Spring after In Situ Lignocellulose Enrichment

por Peacock, Joseph P., Cole, Jessica K., Murugapiran, Senthil K., Dodsworth, Jeremy A., Fisher, Jenny C., Moser, Duane P., Hedlund, Brian P.
Publicado 2013

In situ production of branched glycerol dialkyl glycerol tetraethers in a great basin hot spring (USA)

por Zhang, Chuanlun L., Wang, Jinxiang, Dodsworth, Jeremy A., Williams, Amanda J., Zhu, Chun, Hinrichs, Kai-Uwe, Zheng, Fengfeng, Hedlund, Brian P.
Publicado 2013

Genomic Comparison of Two Family-Level Groups of the Uncultivated NAG1 Archaeal Lineage from Chemically and Geographically Disparate Hot Springs

por Becraft, Eric D., Dodsworth, Jeremy A., Murugapiran, Senthil K., Thomas, Scott C., Ohlsson, J. Ingemar, Stepanauskas, Ramunas, Hedlund, Brian P., Swingley, Wesley D.
Publicado 2017

Position-Specific Metabolic Probing and Metagenomics of Microbial Communities Reveal Conserved Central Carbon Metabolic Network Activities at High Temperatures

por Thomas, Scott C., Tamadonfar, Kevin O., Seymour, Cale O., Lai, Dengxun, Dodsworth, Jeremy A., Murugapiran, Senthil K., Eloe-Fadrosh, Emiley A., Dijkstra, Paul, Hedlund, Brian P.
Publicado 2019

Korarchaeota Diversity, Biogeography, and Abundance in Yellowstone and Great Basin Hot Springs and Ecological Niche Modeling Based on Machine Learning

por Miller-Coleman, Robin L., Dodsworth, Jeremy A., Ross, Christian A., Shock, Everett L., Williams, Amanda J., Hartnett, Hilairy E., McDonald, Austin I., Havig, Jeff R., Hedlund, Brian P.
Publicado 2012

Isolation of diverse members of the Aquificales from geothermal springs in Tengchong, China

por Hedlund, Brian P., Reysenbach, Anna-Louise, Huang, Liuquin, Ong, John C., Liu, Zizhang, Dodsworth, Jeremy A., Ahmed, Reham, Williams, Amanda J., Briggs, Brandon R., Liu, Yitai, Hou, Weiguo, Dong, Hailiang
Publicado 2015

Exploring microbial dark matter to resolve the deep archaeal ancestry of eukaryotes

por Saw, Jimmy H., Spang, Anja, Zaremba-Niedzwiedzka, Katarzyna, Juzokaite, Lina, Dodsworth, Jeremy A., Murugapiran, Senthil K., Colman, Dan R., Takacs-Vesbach, Cristina, Hedlund, Brian P., Guy, Lionel, Ettema, Thijs J. G.
Publicado 2015

Resource partitioning and amino acid assimilation in a terrestrial geothermal spring

por Lai, Dengxun, Hedlund, Brian P., Mau, Rebecca L., Jiao, Jian-Yu, Li, Junhui, Hayer, Michaela, Dijkstra, Paul, Schwartz, Egbert, Li, Wen-Jun, Dong, Hailiang, Palmer, Marike, Dodsworth, Jeremy A., Zhou, En-Min, Hungate, Bruce A.
Publicado 2023

Single-cell and metagenomic analyses indicate a fermentative and saccharolytic lifestyle for members of the OP9 lineage

por Dodsworth, Jeremy A., Blainey, Paul C., Murugapiran, Senthil K., Swingley, Wesley D., Ross, Christian A., Tringe, Susannah G., Chain, Patrick S. G., Scholz, Matthew B., Lo, Chien-Chi, Raymond, Jason, Quake, Stephen R., Hedlund, Brian P.
Publicado 2013

Diversity and Distribution of a Novel Genus of Hyperthermophilic Aquificae Viruses Encoding a Proof-Reading Family-A DNA Polymerase

por Palmer, Marike, Hedlund, Brian P., Roux, Simon, Tsourkas, Philippos K., Doss, Ryan K., Stamereilers, Casey, Mehta, Astha, Dodsworth, Jeremy A., Lodes, Michael, Monsma, Scott, Glavina del Rio, Tijana, Schoenfeld, Thomas W., Eloe-Fadrosh, Emiley A., Mead, David A.
Publicado 2020

A Comprehensive Census of Microbial Diversity in Hot Springs of Tengchong, Yunnan Province China Using 16S rRNA Gene Pyrosequencing

por Hou, Weiguo, Wang, Shang, Dong, Hailiang, Jiang, Hongchen, Briggs, Brandon R., Peacock, Joseph P., Huang, Qiuyuan, Huang, Liuqin, Wu, Geng, Zhi, Xiaoyang, Li, Wenjun, Dodsworth, Jeremy A., Hedlund, Brian P., Zhang, Chuanlun, Hartnett, Hilairy E., Dijkstra, Paul, Hungate, Bruce A.
Publicado 2013

High-Quality Draft Genome Sequence of Kallotenue papyrolyticum JKG1(T) Reveals Broad Heterotrophic Capacity Focused on Carbohydrate and Amino Acid Metabolism

por Hedlund, Brian P., Murugapiran, Senthil K., Huntemann, Marcel, Clum, Alicia, Pillay, Manoj, Palaniappan, Krishnaveni, Varghese, Neha, Mikhailova, Natalia, Stamatis, Dimitrios, Reddy, T. B. K., Ngan, Chew Yee, Daum, Chris, Duffy, Kecia, Shapiro, Nicole, Markowitz, Victor, Ivanova, Natalia, Kyrpides, Nikos, Williams, Amanda J., Cole, Jessica K., Dodsworth, Jeremy A., Woyke, Tanja
Publicado 2015

High-Quality Draft Genome Sequence of Thermocrinis jamiesonii GBS1(T) Isolated from Great Boiling Spring, Nevada

por Ganji, Rakesh, Murugapiran, Senthil K., Ong, John C., Manoharan, Namritha, Huntemann, Marcel, Clum, Alicia, Pillay, Manoj, Palaniappan, Krishnaveni, Varghese, Neha, Mikhailova, Natalia, Stamatis, Dimitrios, Reddy, T. B. K., Ngan, Chew Yee, Daum, Chris, Duffy, Kecia, Shapiro, Nicole, Markowitz, Victor, Ivanova, Natalia, Kyrpides, Nikos, Woyke, Tanja, Dodsworth, Jeremy A., Hedlund, Brian P.
Publicado 2016

Whole Genome Sequencing of Thermus oshimai JL-2 and Thermus thermophilus JL-18, Incomplete Denitrifiers from the United States Great Basin

por Murugapiran, Senthil K., Huntemann, Marcel, Wei, Chia-Lin, Han, James, Detter, John C., Han, Cliff S., Erkkila, Tracy H., Teshima, Hazuki, Chen, Amy, Kyrpides, Nikos, Mavrommatis, Konstantinos, Markowitz, Victor, Szeto, Ernest, Ivanova, Natalia, Pagani, Ioanna, Lam, Jenny, McDonald, Austin I., Dodsworth, Jeremy A., Pati, Amrita, Goodwin, Lynne, Peters, Lin, Pitluck, Sam, Woyke, Tanja, Hedlund, Brian P.
Publicado 2013

Thermus oshimai JL-2 and T. thermophilus JL-18 genome analysis illuminates pathways for carbon, nitrogen, and sulfur cycling

por Murugapiran, Senthil K., Huntemann, Marcel, Wei, Chia-Lin, Han, James, Detter, J. C., Han, Cliff, Erkkila, Tracy H., Teshima, Hazuki, Chen, Amy, Kyrpides, Nikos, Mavrommatis, Konstantinos, Markowitz, Victor, Szeto, Ernest, Ivanova, Natalia, Pagani, Ioanna, Pati, Amrita, Goodwin, Lynne, Peters, Lin, Pitluck, Sam, Lam, Jenny, McDonald, Austin I., Dodsworth, Jeremy A., Woyke, Tanja, Hedlund, Brian P.
Publicado 2013

An essential role for tungsten in the ecology and evolution of a previously uncultivated lineage of anaerobic, thermophilic Archaea

por Buessecker, Steffen, Palmer, Marike, Lai, Dengxun, Dimapilis, Joshua, Mayali, Xavier, Mosier, Damon, Jiao, Jian-Yu, Colman, Daniel R., Keller, Lisa M., St. John, Emily, Miranda, Michelle, Gonzalez, Cristina, Gonzalez, Lizett, Sam, Christian, Villa, Christopher, Zhuo, Madeline, Bodman, Nicholas, Robles, Fernando, Boyd, Eric S., Cox, Alysia D., St. Clair, Brian, Hua, Zheng-Shuang, Li, Wen-Jun, Reysenbach, Anna-Louise, Stott, Matthew B., Weber, Peter K., Pett-Ridge, Jennifer, Dekas, Anne E., Hedlund, Brian P., Dodsworth, Jeremy A.
Publicado 2022

Genomics, Exometabolomics, and Metabolic Probing Reveal Conserved Proteolytic Metabolism of Thermoflexus hugenholtzii and Three Candidate Species From China and Japan

por Thomas, Scott C., Payne, Devon, Tamadonfar, Kevin O., Seymour, Cale O., Jiao, Jian-Yu, Murugapiran, Senthil K., Lai, Dengxun, Lau, Rebecca, Bowen, Benjamin P., Silva, Leslie P., Louie, Katherine B., Huntemann, Marcel, Clum, Alicia, Spunde, Alex, Pillay, Manoj, Palaniappan, Krishnaveni, Varghese, Neha, Mikhailova, Natalia, Chen, I-Min, Stamatis, Dimitrios, Reddy, T. B. K., O’Malley, Ronan, Daum, Chris, Shapiro, Nicole, Ivanova, Natalia, Kyrpides, Nikos C., Woyke, Tanja, Eloe-Fadrosh, Emiley, Hamilton, Trinity L., Dijkstra, Paul, Dodsworth, Jeremy A., Northen, Trent R., Li, Wen-Jun, Hedlund, Brian P.
Publicado 2021

Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea

por Bowers, Robert M, Kyrpides, Nikos C, Stepanauskas, Ramunas, Harmon-Smith, Miranda, Doud, Devin, Reddy, T B K, Schulz, Frederik, Jarett, Jessica, Rivers, Adam R, Eloe-Fadrosh, Emiley A, Tringe, Susannah G, Ivanova, Natalia N, Copeland, Alex, Clum, Alicia, Becraft, Eric D, Malmstrom, Rex R, Birren, Bruce, Podar, Mircea, Bork, Peer, Weinstock, George M, Garrity, George M, Dodsworth, Jeremy A, Yooseph, Shibu, Sutton, Granger, Glöckner, Frank O, Gilbert, Jack A, Nelson, William C, Hallam, Steven J, Jungbluth, Sean P, Ettema, Thijs J G, Tighe, Scott, Konstantinidis, Konstantinos T, Liu, Wen-Tso, Baker, Brett J, Rattei, Thomas, Eisen, Jonathan A, Hedlund, Brian, McMahon, Katherine D, Fierer, Noah, Knight, Rob, Finn, Rob, Cochrane, Guy, Karsch-Mizrachi, Ilene, Tyson, Gene W, Rinke, Christian, Lapidus, Alla, Meyer, Folker, Yilmaz, Pelin, Parks, Donovan H, Murat Eren, A, Schriml, Lynn, Banfield, Jillian F, Hugenholtz, Philip, Woyke, Tanja
Publicado 2017

Correction: Corrigendum: Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea

por Bowers, Robert M, Kyrpides, Nikos C, Stepanauskas, Ramunas, Harmon-Smith, Miranda, Doud, Devin, Reddy, T B K, Schulz, Frederik, Jarett, Jessica, Rivers, Adam R, Eloe-Fadrosh, Emiley A, Tringe, Susannah G, Ivanova, Natalia N, Copeland, Alex, Clum, Alicia, Becraft, Eric D, Malmstrom, Rex R, Birren, Bruce, Podar, Mircea, Bork, Peer, Weinstock, George M, Garrity, George M, Dodsworth, Jeremy A, Yooseph, Shibu, Sutton, Granger, Glöckner, Frank O, Gilbert, Jack A, Nelson, William C, Hallam, Steven J, Jungbluth, Sean P, Ettema, Thijs J G, Tighe, Scott, Konstantinidis, Konstantinos T, Liu, Wen-Tso, Baker, Brett J, Rattei, Thomas, Eisen, Jonathan A, Hedlund, Brian, McMahon, Katherine D, Fierer, Noah, Knight, Rob, Finn, Rob, Cochrane, Guy, Karsch-Mizrachi, Ilene, Tyson, Gene W, Rinke, Christian, Lapidus, Alla, Meyer, Folker, Yilmaz, Pelin, Parks, Donovan H, Eren, A M, Schriml, Lynn, Banfield, Jillian F, Hugenholtz, Philip, Woyke, Tanja
Publicado 2018

Correction: Corrigendum: Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea

por Bowers, Robert M, Kyrpides, Nikos C, Stepanauskas, Ramunas, Harmon-Smith, Miranda, Doud, Devin, Reddy, T B K, Schulz, Frederik, Jarett, Jessica, Rivers, Adam R, Eloe-Fadrosh, Emiley A, Tringe, Susannah G, Ivanova, Natalia N, Copeland, Alex, Clum, Alicia, Becraft, Eric D, Malmstrom, Rex R, Birren, Bruce, Podar, Mircea, Bork, Peer, Weinstock, George M, Garrity, George M, Dodsworth, Jeremy A, Yooseph, Shibu, Sutton, Granger, Glöckner, Frank O, Gilbert, Jack A, Nelson, William C, Hallam, Steven J, Jungbluth, Sean P, Ettema, Thijs J G, Tighe, Scott, Konstantinidis, Konstantinos T, Liu, Wen-Tso, Baker, Brett J, Rattei, Thomas, Eisen, Jonathan A, Hedlund, Brian, McMahon, Katherine D, Fierer, Noah, Knight, Rob, Finn, Rob, Cochrane, Guy, Karsch-Mizrachi, Ilene, Tyson, Gene W, Rinke, Christian, Lapidus, Alla, Meyer, Folker, Yilmaz, Pelin, Parks, Donovan H, Eren, A Murat, Schriml, Lynn, Banfield, Jillian F, Hugenholtz, Philip, Woyke, Tanja
Publicado 2018