The interplay of supercoiling and thymine dimers in DNA

por Lim, Wilber, Randisi, Ferdinando, Doye, Jonathan P K, Louis, Ard A
Publicado 2022

Plectoneme tip bubbles: Coupled denaturation and writhing in supercoiled DNA

por Matek, Christian, Ouldridge, Thomas E., Doye, Jonathan P. K., Louis, Ard A.
Publicado 2015

Chiral shape fluctuations and the origin of chirality in cholesteric phases of DNA origamis

por Tortora, Maxime M. C., Mishra, Garima, Prešern, Domen, Doye, Jonathan P. K.
Publicado 2020

DNA hybridization kinetics: zippering, internal displacement and sequence dependence

por Ouldridge, Thomas E., Šulc, Petr, Romano, Flavio, Doye, Jonathan P. K., Louis, Ard A.
Publicado 2013

Rolling circle amplification shows a sinusoidal template length-dependent amplification bias

por Joffroy, Bastian, Uca, Yavuz O, Prešern, Domen, Doye, Jonathan P. K, Schmidt, Thorsten L
Publicado 2018

Coarse-grained modelling of the structural properties of DNA origami

por Snodin, Benedict E K, Schreck, John S, Romano, Flavio, Louis, Ard A, Doye, Jonathan P K
Publicado 2019

Identifying Physical Causes of Apparent Enhanced Cyclization of Short DNA Molecules with a Coarse-Grained Model

por Harrison, Ryan M., Romano, Flavio, Ouldridge, Thomas E., Louis, Ard A., Doye, Jonathan P. K.
Publicado 2019

Design principles for rapid folding of knotted DNA nanostructures

por Kočar, Vid, Schreck, John S., Čeru, Slavko, Gradišar, Helena, Bašić, Nino, Pisanski, Tomaž, Doye, Jonathan P. K., Jerala, Roman
Publicado 2016

DNA hairpins destabilize duplexes primarily by promoting melting rather than by inhibiting hybridization

por Schreck, John S., Ouldridge, Thomas E., Romano, Flavio, Šulc, Petr, Shaw, Liam P., Louis, Ard A., Doye, Jonathan P.K.
Publicado 2015

DNA bipedal motor walking dynamics: an experimental and theoretical study of the dependency on step size

por Khara, Dinesh C, Schreck, John S, Tomov, Toma E, Berger, Yaron, Ouldridge, Thomas E, Doye, Jonathan P K, Nir, Eyal
Publicado 2018

Planar 2D wireframe DNA origami

por Wang, Xiao, Li, Shanshan, Jun, Hyungmin, John, Torsten, Zhang, Kaiming, Fowler, Hannah, Doye, Jonathan P.K., Chiu, Wah, Bathe, Mark
Publicado 2022

On the biophysics and kinetics of toehold-mediated DNA strand displacement

por Srinivas, Niranjan, Ouldridge, Thomas E., Šulc, Petr, Schaeffer, Joseph M., Yurke, Bernard, Louis, Ard A., Doye, Jonathan P. K., Winfree, Erik
Publicado 2013

Symmetry and simplicity spontaneously emerge from the algorithmic nature of evolution

por Johnston, Iain G., Dingle, Kamaludin, Greenbury, Sam F., Camargo, Chico Q., Doye, Jonathan P. K., Ahnert, Sebastian E., Louis, Ard A.
Publicado 2022

Reply to Ocklenburg and Mundorf: The interplay of developmental bias and natural selection

por Johnston, Iain G., Dingle, Kamaludin, Greenbury, Sam F., Camargo, Chico Q., Doye, Jonathan P. K., Ahnert, Sebastian E., Louis, Ard A.
Publicado 2022

Design and synthesis of pleated DNA origami nanotubes with adjustable diameters

por Berengut, Jonathan F, Berengut, Julian C, Doye, Jonathan P K, Prešern, Domen, Kawamoto, Akihiro, Ruan, Juanfang, Wainwright, Madeleine J, Lee, Lawrence K
Publicado 2019

Substrate conformational dynamics facilitate structure-specific recognition of gapped DNA by DNA polymerase

por Craggs, Timothy D, Sustarsic, Marko, Plochowietz, Anne, Mosayebi, Majid, Kaju, Hendrik, Cuthbert, Andrew, Hohlbein, Johannes, Domicevica, Laura, Biggin, Philip C, Doye, Jonathan P K, Kapanidis, Achillefs N
Publicado 2019