Pioneer-like factor GAF cooperates with PBAP (SWI/SNF) and NURF (ISWI) to regulate transcription

por Judd, Julius, Duarte, Fabiana M., Lis, John T.
Publicado 2021

Inference and effects of barcode multiplets in droplet-based single-cell assays

por Lareau, Caleb A., Ma, Sai, Duarte, Fabiana M., Buenrostro, Jason D.
Publicado 2020

Defining data-driven primary transcript annotations with primaryTranscriptAnnotation in R

por Anderson, Warren D, Duarte, Fabiana M, Civelek, Mete, Guertin, Michael J
Publicado 2020

Deep learning-based enhancement of epigenomics data with AtacWorks

por Lal, Avantika, Chiang, Zachary D., Yakovenko, Nikolai, Duarte, Fabiana M., Israeli, Johnny, Buenrostro, Jason D.
Publicado 2021

Transcription factors GAF and HSF act at distinct regulatory steps to modulate stress-induced gene activation

por Duarte, Fabiana M., Fuda, Nicholas J., Mahat, Dig B., Core, Leighton J., Guertin, Michael J., Lis, John T.
Publicado 2016

An improved auxin-inducible degron system preserves native protein levels and enables rapid and specific protein depletion

por Sathyan, Kizhakke Mattada, McKenna, Brian D., Anderson, Warren D., Duarte, Fabiana M., Core, Leighton, Guertin, Michael J.
Publicado 2019

High-throughput binding characterization of RNA aptamer selections using a microplate-based multiplex microcolumn device

por Szeto, Kylan, Reinholt, Sarah J., Duarte, Fabiana M., Pagano, John M., Ozer, Abdullah, Yao, Li, Lis, John T., Craighead, Harold G.
Publicado 2014

Kinetic networks identify TWIST2 as a key regulatory node in adipogenesis

por Dutta, Arun B., Lank, Daniel S., Przanowska, Roza K., Przanowski, Piotr, Wang, Lixin, Nguyen, Bao, Walavalkar, Ninad M., Duarte, Fabiana M., Guertin, Michael J.
Publicado 2023

Multiplexed Microcolumn-Based Process for Efficient Selection of RNA Aptamers

por Latulippe, David R., Szeto, Kylan, Ozer, Abdullah, Duarte, Fabiana M., Kelly, Christopher V., Pagano, John M., White, Brian S., Shalloway, David, Lis, John T., Craighead, Harold G.
Publicado 2013

Functional inference of gene regulation using single-cell multi-omics

por Kartha, Vinay K., Duarte, Fabiana M., Hu, Yan, Ma, Sai, Chew, Jennifer G., Lareau, Caleb A., Earl, Andrew, Burkett, Zach D., Kohlway, Andrew S., Lebofsky, Ronald, Buenrostro, Jason D.
Publicado 2022

The Drosophila BEAF insulator protein interacts with the polybromo subunit of the PBAP chromatin remodeling complex

por McKowen, J Keller, Avva, Satya V S P, Maharjan, Mukesh, Duarte, Fabiana M, Tome, Jacob M, Judd, Julius, Wood, Jamie L, Negedu, Sunday, Dong, Yunkai, Lis, John T, Hart, Craig M
Publicado 2022

Single-cell multi-scale footprinting reveals the modular organization of DNA regulatory elements

por Hu, Yan, Ma, Sai, Kartha, Vinay K., Duarte, Fabiana M., Horlbeck, Max, Zhang, Ruochi, Shrestha, Rojesh, Labade, Ajay, Kletzien, Heidi, Meliki, Alia, Castillo, Andrew, Durand, Neva, Mattei, Eugenio, Anderson, Lauren J., Tay, Tristan, Earl, Andrew S., Shoresh, Noam, Epstein, Charles B., Wagers, Amy, Buenrostro, Jason D.
Publicado 2023