Schmutzi: estimation of contamination and endogenous mitochondrial consensus calling for ancient DNA

por Renaud, Gabriel, Slon, Viviane, Duggan, Ana T., Kelso, Janet
Publicado 2015

Response to Brinkmann et al. “Re-assembly of 19th century smallpox vaccine genomes reveals the contemporaneous use of horsepox and horsepox-related viruses in the United States”...

por Duggan, Ana T., Holmes, Edward C., Poinar, Hendrik N.
Publicado 2020

Quantitative Phylogenomics of Within-Species Mitogenome Variation: Monte Carlo and Non-Parametric Analysis of Phylogeographic Structure among Discrete Transatlantic Breeding Areas...

por Carr, Steven M., Duggan, Ana T., Stenson, Garry B., Marshall, H. Dawn
Publicado 2015

Comment: Characterization of Two Historic Smallpox Specimens from a Czech Museum

por Porter, Ashleigh F., Duggan, Ana T., Poinar, Hendrik N., Holmes, Edward C.
Publicado 2017

The Gateway from Near into Remote Oceania: New Insights from Genome-Wide Data

por Pugach, Irina, Duggan, Ana T, Merriwether, D Andrew, Friedlaender, Françoise R, Friedlaender, Jonathan S, Stoneking, Mark
Publicado 2018

Dorset Pre-Inuit and Beothuk foodways in Newfoundland, ca. AD 500-1829

por Harris, Alison J. T., Duggan, Ana T., Marciniak, Stephanie, Marshall, Ingeborg, Fuller, Benjamin T., Southon, John, Poinar, Hendrik N., Grimes, Vaughan
Publicado 2019

Investigating the Prehistory of Tungusic Peoples of Siberia and the Amur-Ussuri Region with Complete mtDNA Genome Sequences and Y-chromosomal Markers

por Duggan, Ana T., Whitten, Mark, Wiebe, Victor, Crawford, Michael, Butthof, Anne, Spitsyn, Victor, Makarov, Sergey, Novgorodov, Innokentiy, Osakovsky, Vladimir, Pakendorf, Brigitte
Publicado 2013

Successful reconstruction of whole mitochondrial genomes from ancient Central America and Mexico

por Morales-Arce, Ana Y., Hofman, Courtney A., Duggan, Ana T., Benfer, Adam K., Katzenberg, M. Anne, McCafferty, Geoffrey, Warinner, Christina
Publicado 2017

Resolving the phylogenetic position of Darwin's extinct ground sloth (Mylodon darwinii) using mitogenomic and nuclear exon data

por Delsuc, Frédéric, Kuch, Melanie, Gibb, Gillian C., Hughes, Jonathan, Szpak, Paul, Southon, John, Enk, Jacob, Duggan, Ana T., Poinar, Hendrik N.
Publicado 2018

The paradox of HBV evolution as revealed from a 16(th) century mummy

por Patterson Ross, Zoe, Klunk, Jennifer, Fornaciari, Gino, Giuffra, Valentina, Duchêne, Sebastian, Duggan, Ana T., Poinar, Debi, Douglas, Mark W., Eden, John-Sebastian, Holmes, Edward C., Poinar, Hendrik N.
Publicado 2018

Correction: The paradox of HBV evolution as revealed from a 16(th) century mummy

por Patterson Ross, Zoe, Klunk, Jennifer, Fornaciari, Gino, Giuffra, Valentina, Duchêne, Sebastian, Duggan, Ana T., Poinar, Debi, Douglas, Mark W., Eden, John-Sebastian, Holmes, Edward C., Poinar, Hendrik N.
Publicado 2018

A 16(th) century Escherichia coli draft genome associated with an opportunistic bile infection

por Long, George S., Klunk, Jennifer, Duggan, Ana T., Tapson, Madeline, Giuffra, Valentina, Gazzè, Lavinia, Fornaciari, Antonio, Duchene, Sebastian, Fornaciari, Gino, Clermont, Olivier, Denamur, Erick, Golding, G. Brian, Poinar, Hendrik
Publicado 2022

A 14(th) century CE Brucella melitensis genome and the recent expansion of the Western Mediterranean clade

por Long, George S., Hider, Jessica, Duggan, Ana T., Klunk, Jennifer, Eaton, Katherine, Karpinski, Emil, Giuffra, Valentina, Ventura, Luca, Prowse, Tracy L., Fornaciari, Antonio, Fornaciari, Gino, Holmes, Edward C., Golding, G. Brian, Poinar, Hendrik N.
Publicado 2023

Ancient Clostridium DNA and variants of tetanus neurotoxins associated with human archaeological remains

por Hodgins, Harold P., Chen, Pengsheng, Lobb, Briallen, Wei, Xin, Tremblay, Benjamin J. M., Mansfield, Michael J., Lee, Victoria C. Y., Lee, Pyung-Gang, Coffin, Jeffrey, Duggan, Ana T., Dolphin, Alexis E., Renaud, Gabriel, Dong, Min, Doxey, Andrew C.
Publicado 2023

American mastodon mitochondrial genomes suggest multiple dispersal events in response to Pleistocene climate oscillations

por Karpinski, Emil, Hackenberger, Dirk, Zazula, Grant, Widga, Chris, Duggan, Ana T., Golding, G. Brian, Kuch, Melanie, Klunk, Jennifer, Jass, Christopher N., Groves, Pam, Druckenmiller, Patrick, Schubert, Blaine W., Arroyo-Cabrales, Joaquin, Simpson, William F., Hoganson, John W., Fisher, Daniel C., Ho, Simon Y. W., MacPhee, Ross D. E., Poinar, Hendrik N.
Publicado 2020

17(th) Century Variola Virus Reveals the Recent History of Smallpox

por Duggan, Ana T., Perdomo, Maria F., Piombino-Mascali, Dario, Marciniak, Stephanie, Poinar, Debi, Emery, Matthew V., Buchmann, Jan P., Duchêne, Sebastian, Jankauskas, Rimantas, Humphreys, Margaret, Golding, G. Brian, Southon, John, Devault, Alison, Rouillard, Jean-Marie, Sahl, Jason W., Dutour, Olivier, Hedman, Klaus, Sajantila, Antti, Smith, Geoffrey L., Holmes, Edward C., Poinar, Hendrik N.
Publicado 2016

A molecular portrait of maternal sepsis from Byzantine Troy

por Devault, Alison M, Mortimer, Tatum D, Kitchen, Andrew, Kiesewetter, Henrike, Enk, Jacob M, Golding, G Brian, Southon, John, Kuch, Melanie, Duggan, Ana T, Aylward, William, Gardner, Shea N, Allen, Jonathan E, King, Andrew M, Wright, Gerard, Kuroda, Makoto, Kato, Kengo, Briggs, Derek EG, Fornaciari, Gino, Holmes, Edward C, Poinar, Hendrik N, Pepperell, Caitlin S
Publicado 2017

The origins and genomic diversity of American Civil War Era smallpox vaccine strains

por Duggan, Ana T., Klunk, Jennifer, Porter, Ashleigh F., Dhody, Anna N., Hicks, Robert, Smith, Geoffrey L., Humphreys, Margaret, McCollum, Andrea M., Davidson, Whitni B., Wilkins, Kimberly, Li, Yu, Burke, Amanda, Polasky, Hanna, Flanders, Lowell, Poinar, Debi, Raphenya, Amogelang R., Lau, Tammy T. Y., Alcock, Brian, McArthur, Andrew G., Golding, G. Brian, Holmes, Edward C., Poinar, Hendrik N.
Publicado 2020

SARS-CoV-2 infection and transmission in the North American deer mouse

por Griffin, Bryan D., Chan, Mable, Tailor, Nikesh, Mendoza, Emelissa J., Leung, Anders, Warner, Bryce M., Duggan, Ana T., Moffat, Estella, He, Shihua, Garnett, Lauren, Tran, Kaylie N., Banadyga, Logan, Albietz, Alixandra, Tierney, Kevin, Audet, Jonathan, Bello, Alexander, Vendramelli, Robert, Boese, Amrit S., Fernando, Lisa, Lindsay, L. Robbin, Jardine, Claire M., Wood, Heidi, Poliquin, Guillaume, Strong, James E., Drebot, Michael, Safronetz, David, Embury-Hyatt, Carissa, Kobasa, Darwyn
Publicado 2021

The DataHarmonizer: a tool for faster data harmonization, validation, aggregation and analysis of pathogen genomics contextual information

por Gill, Ivan S., Griffiths, Emma J., Dooley, Damion, Cameron, Rhiannon, Savić Kallesøe, Sarah, John, Nithu Sara, Sehar, Anoosha, Gosal, Gurinder, Alexander, David, Chapel, Madison, Croxen, Matthew A., Delisle, Benjamin, Di Tullio, Rachelle, Gaston, Daniel, Duggan, Ana, Guthrie, Jennifer L., Horsman, Mark, Joshi, Esha, Kearny, Levon, Knox, Natalie, Lau, Lynette, LeBlanc, Jason J., Li, Vincent, Lyons, Pierre, MacKenzie, Keith, McArthur, Andrew G., Panousis, Emily M., Palmer, John, Prystajecky, Natalie, Smith, Kerri N., Tanner, Jennifer, Townend, Christopher, Tyler, Andrea, Van Domselaar, Gary, Hsiao, William W. L.
Publicado 2023