shinyGISPA: A web application for characterizing phenotype by gene sets using multiple omics data combinations

por Dwivedi, Bhakti, Kowalski, Jeanne
Publicado 2018

shinySISPA: A web tool for defining sample groups using gene sets from multiple-omics data

por Dwivedi, Bhakti, Kowalski, Jeanne
Publicado 2018

Phylogenetic inference under varying proportions of indel-induced alignment gaps

por Dwivedi, Bhakti, Gadagkar, Sudhindra R
Publicado 2009

NOJAH: NOt Just Another Heatmap for genome-wide cluster analysis

por Rupji, Manali, Dwivedi, Bhakti, Kowalski, Jeanne
Publicado 2019

Phage Eco-Locator: a web tool for visualization and analysis of phage genomes in metagenomic data sets

por Aziz, Ramy K, Dwivedi, Bhakti, Breitbart, Mya, Edwards, Robert A
Publicado 2011

Survival Genie, a web platform for survival analysis across pediatric and adult cancers

por Dwivedi, Bhakti, Mumme, Hope, Satpathy, Sarthak, Bhasin, Swati S., Bhasin, Manoj
Publicado 2022

A bioinformatic analysis of ribonucleotide reductase genes in phage genomes and metagenomes

por Dwivedi, Bhakti, Xue, Bingjie, Lundin, Daniel, Edwards, Robert A, Breitbart, Mya
Publicado 2013

PhiSiGns: an online tool to identify signature genes in phages and design PCR primers for examining phage diversity

por Dwivedi, Bhakti, Schmieder, Robert, Goldsmith, Dawn B, Edwards, Robert A, Breitbart, Mya
Publicado 2012

Multidimensional metrics for estimating phage abundance, distribution, gene density, and sequence coverage in metagenomes

por Aziz, Ramy K., Dwivedi, Bhakti, Akhter, Sajia, Breitbart, Mya, Edwards, Robert A.
Publicado 2015

Host Genome Variation is Associated with Neurocognitive Outcome in Survivors of Pediatric Medulloblastoma()

por Siegel, Benjamin I, King, Tricia Z, Rupji, Manali, Dwivedi, Bhakti, Carter, Alexis B, Kowalski, Jeanne, MacDonald, Tobey J
Publicado 2019

Distinct Lineage of Vesiculovirus from Big Brown Bats, United States

por Ng, Terry Fei Fan, Driscoll, Cindy, Carlos, Maria Paz, Prioleau, Algernon, Schmieder, Robert, Dwivedi, Bhakti, Wong, Jakk, Cha, Yunhee, Head, Steven, Breitbart, Mya, Delwart, Eric
Publicado 2013

Low expression of pro-apoptotic Bcl-2 family proteins sets the apoptotic threshold in Waldenström Macroglobulinemia

por Gaudette, Brian T., Dwivedi, Bhakti, Chitta, Kasyapa S., Poulain, Stéphanie, Powell, Doris, Vertino, Paula, Leleu, Xavier, Lonial, Sagar, Chanan-Khan, Asher A., Kowalski, Jeanne, Boise, Lawrence H.
Publicado 2015

The level of oncogenic Ras determines the malignant transformation of Lkb1 mutant tissue in vivo

por Rackley, Briana, Seong, Chang-Soo, Kiely, Evan, Parker, Rebecca E., Rupji, Manali, Dwivedi, Bhakti, Heddleston, John M., Giang, William, Anthony, Neil, Chew, Teng-Leong, Gilbert-Ross, Melissa
Publicado 2021

ETV2/ER71 regulates the generation of FLK1(+) cells from mouse embryonic stem cells through miR-126-MAPK signaling

por Kim, Ju Young, Lee, Dong Hun, Kim, Joo Kyung, Choi, Hong Seo, Dwivedi, Bhakti, Rupji, Manali, Kowalski, Jeanne, Green, Stefan J., Song, Heesang, Park, Won Jong, Chang, Ji Young, Kim, Tae Min, Park, Changwon
Publicado 2019

MERTK Inhibition Induces Polyploidy and Promotes Cell Death and Cellular Senescence in Glioblastoma Multiforme

por Sufit, Alexandra, Lee-Sherick, Alisa B., DeRyckere, Deborah, Rupji, Manali, Dwivedi, Bhakti, Varella-Garcia, Marileila, Pierce, Angela M., Kowalski, Jeanne, Wang, Xiaodong, Frye, Stephen V., Earp, H. Shelton, Keating, Amy K., Graham, Douglas K.
Publicado 2016

Live-cell invasive phenotyping uncovers the ALK2/BMP6 iron homeostasis pathway as a therapeutic vulnerability in LKB1-mutant lung cancer

por Koo, Junghui, Seong, Chang-Soo, Parker, Rebecca E., Dwivedi, Bhakti, Arthur, Robert A., Dinasarapu, Ashok Reddy, Johnston, H. Richard, Claussen, Henry, Tucker-Burden, Carol, Ramalingam, Suresh S., Fu, Haian, Zhou, Wei, Marcus, Adam I., Gilbert-Ross, Melissa
Publicado 2023

Obesity-induced galectin-9 is a therapeutic target in B-cell acute lymphoblastic leukemia

por Lee, Miyoung, Hamilton, Jamie A. G., Talekar, Ganesh R., Ross, Anthony J., Michael, Langston, Rupji, Manali, Dwivedi, Bhakti, Raikar, Sunil S., Boss, Jeremy, Scharer, Christopher D., Graham, Douglas K., DeRyckere, Deborah, Porter, Christopher C., Henry, Curtis J.
Publicado 2022

Epigenetically heterogeneous tumor cells direct collective invasion through filopodia-driven fibronectin micropatterning

por Summerbell, Emily R., Mouw, Janna K., Bell, Joshua S. K., Knippler, Christina M., Pedro, Brian, Arnst, Jamie L., Khatib, Tala O., Commander, Rachel, Barwick, Benjamin G., Konen, Jessica, Dwivedi, Bhakti, Seby, Sandra, Kowalski, Jeanne, Vertino, Paula M., Marcus, Adam I.
Publicado 2020

Signatures of somatic mutations and gene expression from p16(INK4A) positive head and neck squamous cell carcinomas (HNSCC)

por Saba, Nabil F., Dinasarapu, Ashok R., Magliocca, Kelly R., Dwivedi, Bhakti, Seby, Sandra, Qin, Zhaohui S., Patel, Mihir, Griffith, Christopher C., Wang, Xu, El-Deiry, Mark, Steuer, Conor Ernst, Kowalski, Jeanne, Shin, Dong Moon, Zwick, Michael E., Chen, Zhuo Georgia
Publicado 2020

Gene integrated set profile analysis: a context-based approach for inferring biological endpoints

por Kowalski, Jeanne, Dwivedi, Bhakti, Newman, Scott, Switchenko, Jeffery M., Pauly, Rini, Gutman, David A., Arora, Jyoti, Gandhi, Khanjan, Ainslie, Kylie, Doho, Gregory, Qin, Zhaohui, Moreno, Carlos S., Rossi, Michael R., Vertino, Paula M., Lonial, Sagar, Bernal-Mizrachi, Leon, Boise, Lawrence H.
Publicado 2016