Reduce Manual Curation by Combining Gene Predictions from Multiple Annotation Engines, a Case Study of Start Codon Prediction

por Ederveen, Thomas H. A., Overmars, Lex, van Hijum, Sacha A. F. T.
Publicado 2013

Skin microbiota in health and disease: From sequencing to biology

por Ederveen, Thomas H. A., Smits, Jos P. H., Boekhorst, Jos, Schalkwijk, Joost, van den Bogaard, Ellen H., Zeeuwen, Patrick L. J. M.
Publicado 2020

Lipidation of Pneumococcal Antigens Leads to Improved Immunogenicity and Protection

por Voß, Franziska, van Beek, Lucille F., Schwudke, Dominik, Ederveen, Thomas H. A., van Opzeeland, Fred J., Thalheim, Daniela, Werner, Sidney, de Jonge, Marien I., Hammerschmidt, Sven
Publicado 2020

Computational approaches for network-based integrative multi-omics analysis

por Agamah, Francis E., Bayjanov, Jumamurat R., Niehues, Anna, Njoku, Kelechi F., Skelton, Michelle, Mazandu, Gaston K., Ederveen, Thomas H. A., Mulder, Nicola, Chimusa, Emile R., 't Hoen, Peter A. C.
Publicado 2022

Haemophilus is overrepresented in the nasopharynx of infants hospitalized with RSV infection and associated with increased viral load and enhanced mucosal CXCL8 responses

por Ederveen, Thomas H. A., Ferwerda, Gerben, Ahout, Inge M., Vissers, Marloes, de Groot, Ronald, Boekhorst, Jos, Timmerman, Harro M., Huynen, Martijn A., van Hijum, Sacha A. F. T., de Jonge, Marien I.
Publicado 2018

Gut microbiome in ADHD and its relation to neural reward anticipation

por Aarts, Esther, Ederveen, Thomas H. A., Naaijen, Jilly, Zwiers, Marcel P., Boekhorst, Jos, Timmerman, Harro M., Smeekens, Sanne P., Netea, Mihai G., Buitelaar, Jan K., Franke, Barbara, van Hijum, Sacha A. F. T., Arias Vasquez, Alejandro
Publicado 2017

Vesicular hand eczema transcriptome analysis provides insights into its pathophysiology

por Voorberg, Angelique N., Niehues, Hanna, Oosterhaven, Jart A. F., Romeijn, Geertruida L. E., van Vlijmen‐Willems, Ivonne M. J. J., van Erp, Piet E. J., Ederveen, Thomas H. A., Zeeuwen, Patrick L. J. M., Schuttelaar, Marie L. A.
Publicado 2021

A generic workflow for Single Locus Sequence Typing (SLST) design and subspecies characterization of microbiota

por Ederveen, Thomas H. A., Smits, Jos P. H., Hajo, Karima, van Schalkwijk, Saskia, Kouwenhoven, Tessa A., Lukovac, Sabina, Wels, Michiel, van den Bogaard, Ellen H., Schalkwijk, Joost, Boekhorst, Jos, Zeeuwen, Patrick L. J. M., van Hijum, Sacha A. F. T.
Publicado 2019

Novel high-resolution targeted sequencing of the cervicovaginal microbiome

por Andralojc, Karolina M., Molina, Mariano A., Qiu, Mengjie, Spruijtenburg, Bram, Rasing, Menno, Pater, Bernard, Huynen, Martijn A., Dutilh, Bas E., Ederveen, Thomas H. A., Elmelik, Duaa, Siebers, Albert G., Loopik, Diede, Bekkers, Ruud L. M., Leenders, William P. J., Melchers, Willem J. G.
Publicado 2021

Aberrant intestinal microbiota due to IL-1 receptor antagonist deficiency promotes IL-17- and TLR4-dependent arthritis

por Rogier, Rebecca, Ederveen, Thomas H. A., Boekhorst, Jos, Wopereis, Harm, Scher, Jose U., Manasson, Julia, Frambach, Sanne J. C. M., Knol, Jan, Garssen, Johan, van der Kraan, Peter M., Koenders, Marije I., van den Berg, Wim B., van Hijum, Sacha A. F. T., Abdollahi-Roodsaz, Shahla
Publicado 2017

Supplementation of diet with non-digestible oligosaccharides alters the intestinal microbiota, but not arthritis development, in IL-1 receptor antagonist deficient mice

por Rogier, Rebecca, Ederveen, Thomas H. A., Wopereis, Harm, Hartog, Anita, Boekhorst, Jos, van Hijum, Sacha A. F. T., Knol, Jan, Garssen, Johan, Walgreen, Birgitte, Helsen, Monique M., van der Kraan, Peter M., van Lent, Peter L. E. M., van de Loo, Fons A. J., Abdollahi-Roodsaz, Shahla, Koenders, Marije I.
Publicado 2019

Correction: Supplementation of diet with non-digestible oligosaccharides alters the intestinal microbiota, but not arthritis development, in IL-1 receptor antagonist deficient mice

por Rogier, Rebecca, Ederveen, Thomas H. A., Wopereis, Harm, Hartog, Anita, Boekhorst, Jos, van Hijum, Sacha A. F. T., Knol, Jan, Garssen, Johan, Walgreen, Birgitte, Helsen, Monique M., van der Kraan, Peter M., van Lent, Peter L. E. M., van de Loo, Fons A. J., Abdollahi-Roodsaz, Shahla, Koenders, Marije I.
Publicado 2019

Examining the Distribution and Impact of Single-Nucleotide Polymorphisms in the Capsular Locus of Streptococcus pneumoniae Serotype 19A

por Arends, D. W., Miellet, W. R., Langereis, J. D., Ederveen, T. H. A., van der Gaast–de Jongh, C. E., van Scherpenzeel, M., Knol, M. J., van Sorge, N. M., Lefeber, D. J., Trzciński, K., Sanders, E. A. M., Dorfmueller, H. C., Bootsma, H. J., de Jonge, M. I.
Publicado 2021

Exploring metal availability in the natural niche of Streptococcus pneumoniae to discover potential vaccine antigens

por van Beek, Lucille F., Surmann, Kristin, van den Berg van Saparoea, H. Bart, Houben, Diane, Jong, Wouter S. P., Hentschker, Christian, Ederveen, Thomas H. A., Mitsi, Elena, Ferreira, Daniela M., van Opzeeland, Fred, van der Gaast – de Jongh, Christa E., Joosten, Irma, Völker, Uwe, Schmidt, Frank, Luirink, Joen, Diavatopoulos, Dimitri A., de Jonge, Marien I.
Publicado 2020