GenomePeek—an online tool for prokaryotic genome and metagenome analysis

por McNair, Katelyn, Edwards, Robert A.
Publicado 2015

PMAnalyzer: a new web interface for bacterial growth curve analysis

por Cuevas, Daniel A, Edwards, Robert A
Publicado 2017

Growth Score: a single metric to define growth in 96-well phenotype assays

por Cuevas, Daniel A., Edwards, Robert A.
Publicado 2018

How Metagenomics Has Transformed Our Understanding of Bacteriophages in Microbiome Research

por Inglis, Laura K., Edwards, Robert A.
Publicado 2022

An application of statistics to comparative metagenomics

por Rodriguez-Brito, Beltran, Rohwer, Forest, Edwards, Robert A
Publicado 2006

Viral communities associated with healthy and bleaching corals

por Marhaver, Kristen L, Edwards, Robert A, Rohwer, Forest
Publicado 2008

Transposases are the most abundant, most ubiquitous genes in nature

por Aziz, Ramy K., Breitbart, Mya, Edwards, Robert A.
Publicado 2010

PhiSpy: a novel algorithm for finding prophages in bacterial genomes that combines similarity- and composition-based strategies

por Akhter, Sajia, Aziz, Ramy K., Edwards, Robert A.
Publicado 2012

Prophage rates in the human microbiome vary by body site and host health

por Inglis, Laura K., Roach, Michael J., Edwards, Robert A.
Publicado 2023

PHACTS, a computational approach to classifying the lifestyle of phages

por McNair, Katelyn, Bailey, Barbara A., Edwards, Robert A.
Publicado 2012

Phage Eco-Locator: a web tool for visualization and analysis of phage genomes in metagenomic data sets

por Aziz, Ramy K, Dwivedi, Bhakti, Breitbart, Mya, Edwards, Robert A
Publicado 2011

PARTIE: a partition engine to separate metagenomic and amplicon projects in the Sequence Read Archive

por Torres, Pedro J, Edwards, Robert A, McNair, Katelyn A
Publicado 2017

PRFect: A tool to predict programmed ribosomal frameshifts in prokaryotic and viral genomes

por McNair, Katelyn, Salamon, Peter, Edwards, Robert A., Segall, Anca M.
Publicado 2023

Knowing and Naming: Phage Annotation and Nomenclature for Phage Therapy

por Grigson, Susanna R, Giles, Sarah K, Edwards, Robert A, Papudeshi, Bhavya
Publicado 2023

A bioinformatic analysis of ribonucleotide reductase genes in phage genomes and metagenomes

por Dwivedi, Bhakti, Xue, Bingjie, Lundin, Daniel, Edwards, Robert A, Breitbart, Mya
Publicado 2013

PhiSiGns: an online tool to identify signature genes in phages and design PCR primers for examining phage diversity

por Dwivedi, Bhakti, Schmieder, Robert, Goldsmith, Dawn B, Edwards, Robert A, Breitbart, Mya
Publicado 2012

Multidimensional metrics for estimating phage abundance, distribution, gene density, and sequence coverage in metagenomes

por Aziz, Ramy K., Dwivedi, Bhakti, Akhter, Sajia, Breitbart, Mya, Edwards, Robert A.
Publicado 2015

SUPER-FOCUS: a tool for agile functional analysis of shotgun metagenomic data

por Silva, Genivaldo Gueiros Z., Green, Kevin T., Dutilh, Bas E., Edwards, Robert A.
Publicado 2016

Towards Predicting Gut Microbial Metabolism: Integration of Flux Balance Analysis and Untargeted Metabolomics

por Kuang, Ellen, Marney, Matthew, Cuevas, Daniel, Edwards, Robert A., Forsberg, Erica M.
Publicado 2020

Applying Shannon's information theory to bacterial and phage genomes and metagenomes

por Akhter, Sajia, Bailey, Barbara A., Salamon, Peter, Aziz, Ramy K., Edwards, Robert A.
Publicado 2013